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The map label for this gene is ycdJ [C]

Identifier: 169627244

GI number: 169627244

Start: 135937

End: 136827

Strand: Reverse

Name: ycdJ [C]

Synonym: MAB_0139c

Alternate gene names: 169627244

Gene position: 136827-135937 (Counterclockwise)

Preceding gene: 169627245

Following gene: 169627239

Centisome position: 2.7

GC content: 61.62

Gene sequence:

>891_bases
ATGACATCAGCACGGTTCACATTCCGCGGTGACACACTCGCCTACAGCCGCACTGGCACCGGCCCGCCAATTCTGTTCCT
GCACAACGGCGGGTCTGCCAAGGAGATCTGGACGCGGCAGGTCGAGGTGCTTCGACAACGGTATGAAGTGATCTGCCTAG
ACCATCTGGGGTACGGCGAATCCGATATGCCTGAACGCGGCTACACCATCGATCAACACGTGGAGCGTCTGTCCGCGTTT
ATCGAGCACCTCGGTCATGAACGTATTTCCGTTGTCGGAAACTGCATGGGAAGTGCGATGGCCCTGTTGCTAGCCGACCG
CAGACCGGAGCTATTCGACTCACTTGTCCTGATCAACCCGTTGTCGAAGAACACCGCACGCCGTGGCGTACTAGGCTGGC
TTTTGCCACTTGTTTCGCGTTTTCCGACGCTCTCAATGGCCATCTCCCGGCGTGTACGGATTCCGCAAGCGCTGACAAAC
ATCGTCATTACCGTGCAATTCGGTCCGCGGAACTGGCTCCGTGGCATCCGGGCGCCGCGGCCGGGAACCGCGCAGGCCGG
CAAGGGCTGGTCGGTGCGCGGAAGACTCGCCGCCCTGGCAGAGATGTTTTGCGATCAAACCTCGCTCGGCGCCGTGGACG
AGATCCGCCCCGGCCCGGATTTTCCCCCGTTCGCCGTGATCTGGGGTGACTCGAACCTCGGCCTATCCCCGCGGGCTGGC
CGGGCACTCAACAGGACGCTGCAGCCGGACCGTGAAGAATTCCTGACTCGATGTGGCCATCTCCCGATGATGGAATCCCC
CGAGGAAGTCACCGCCATCATCACGGAGTTCATCGCCCGCCCGCCCGCTAGGCGATTAGGCGATCTCGCCACGTCTCCAG
GGTCTGCATAA

Upstream 100 bases:

>100_bases
CCACCAATACCGAAATGCGCCTGCAAAACCGGTACTTCCCGTTCAGTGACTACGAATTCACCACTACGCAGGCACGGCAG
CTCGTCGCGGAGAGCGTCGG

Downstream 100 bases:

>100_bases
AGACGCTCGTGGACTGATCGGGTTCGACGAGGCCCAACGTATGGTTGACAACCAGTCCCATGCCCGTGGCCACAATGGCC
GCCACGGCGTCGTCCAGCAT

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTSARFTFRGDTLAYSRTGTGPPILFLHNGGSAKEIWTRQVEVLRQRYEVICLDHLGYGESDMPERGYTIDQHVERLSAF
IEHLGHERISVVGNCMGSAMALLLADRRPELFDSLVLINPLSKNTARRGVLGWLLPLVSRFPTLSMAISRRVRIPQALTN
IVITVQFGPRNWLRGIRAPRPGTAQAGKGWSVRGRLAALAEMFCDQTSLGAVDEIRPGPDFPPFAVIWGDSNLGLSPRAG
RALNRTLQPDREEFLTRCGHLPMMESPEEVTAIITEFIARPPARRLGDLATSPGSA

Sequences:

>Translated_296_residues
MTSARFTFRGDTLAYSRTGTGPPILFLHNGGSAKEIWTRQVEVLRQRYEVICLDHLGYGESDMPERGYTIDQHVERLSAF
IEHLGHERISVVGNCMGSAMALLLADRRPELFDSLVLINPLSKNTARRGVLGWLLPLVSRFPTLSMAISRRVRIPQALTN
IVITVQFGPRNWLRGIRAPRPGTAQAGKGWSVRGRLAALAEMFCDQTSLGAVDEIRPGPDFPPFAVIWGDSNLGLSPRAG
RALNRTLQPDREEFLTRCGHLPMMESPEEVTAIITEFIARPPARRLGDLATSPGSA
>Mature_295_residues
TSARFTFRGDTLAYSRTGTGPPILFLHNGGSAKEIWTRQVEVLRQRYEVICLDHLGYGESDMPERGYTIDQHVERLSAFI
EHLGHERISVVGNCMGSAMALLLADRRPELFDSLVLINPLSKNTARRGVLGWLLPLVSRFPTLSMAISRRVRIPQALTNI
VITVQFGPRNWLRGIRAPRPGTAQAGKGWSVRGRLAALAEMFCDQTSLGAVDEIRPGPDFPPFAVIWGDSNLGLSPRAGR
ALNRTLQPDREEFLTRCGHLPMMESPEEVTAIITEFIARPPARRLGDLATSPGSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32722; Mature: 32591

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSARFTFRGDTLAYSRTGTGPPILFLHNGGSAKEIWTRQVEVLRQRYEVICLDHLGYGE
CCCCEEEECCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCCCCC
SDMPERGYTIDQHVERLSAFIEHLGHERISVVGNCMGSAMALLLADRRPELFDSLVLINP
CCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECC
LSKNTARRGVLGWLLPLVSRFPTLSMAISRRVRIPQALTNIVITVQFGPRNWLRGIRAPR
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHCCEEEEEEECCHHHHHHCCCCC
PGTAQAGKGWSVRGRLAALAEMFCDQTSLGAVDEIRPGPDFPPFAVIWGDSNLGLSPRAG
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCC
RALNRTLQPDREEFLTRCGHLPMMESPEEVTAIITEFIARPPARRLGDLATSPGSA
HHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSARFTFRGDTLAYSRTGTGPPILFLHNGGSAKEIWTRQVEVLRQRYEVICLDHLGYGE
CCCEEEECCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEEECCCCCCC
SDMPERGYTIDQHVERLSAFIEHLGHERISVVGNCMGSAMALLLADRRPELFDSLVLINP
CCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECC
LSKNTARRGVLGWLLPLVSRFPTLSMAISRRVRIPQALTNIVITVQFGPRNWLRGIRAPR
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHCCEEEEEEECCHHHHHHCCCCC
PGTAQAGKGWSVRGRLAALAEMFCDQTSLGAVDEIRPGPDFPPFAVIWGDSNLGLSPRAG
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCC
RALNRTLQPDREEFLTRCGHLPMMESPEEVTAIITEFIARPPARRLGDLATSPGSA
HHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]