Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169627128

Identifier: 169627128

GI number: 169627128

Start: 20919

End: 21860

Strand: Direct

Name: 169627128

Synonym: MAB_0020

Alternate gene names: NA

Gene position: 20919-21860 (Clockwise)

Preceding gene: 169627127

Following gene: 169627130

Centisome position: 0.41

GC content: 68.26

Gene sequence:

>942_bases
GTGAGTTCACCGAACGATCCGGGGGAGTCTGGCGCAAACGAACGCCCCGTGGACCAGGCGGACTTGCCTCCCTGGCAGCG
GGCGGAGCGGCGGCGTGGTTCACACGCCGCCGCTACCGGCCCGCAGCGGATTCCCGACCGCGAGCCGCGCCCCGGTGGCG
CACCGACCGAGATCATCCCGATTGTGGACGACGCTTCGGCCCCTCCTACGGCGCCGACATCGGCCCCGCGCCCCAGTGGC
CGTCCGTCCGCAGGACTGGATGCCCGGCTCAGCAGATTCATCTCCGGAACGGCCGCACCGGCCGGATTCACCACCCCGCC
TGCGCGGGCTGAGGCGGATCCGGAGCCCGAACCGTACGACGAGGTGCCGGAGCGCCCCGAAAGATCCGAGAGGGCCGATC
GGCCCGAGCCGCCCCGCGCGGGCACTCCGTGGGGCGAGTCCGGCGCGCAAGAGCCGGTGCGCGCCTCCAAGAGCGCTCTC
AAGAACGAAGACCTGCCGGATCTGTCCGGGCCGGTCCCCCGTCCGCCCCGCAGAAGTGATGCGGCACAAGGCGGTTCGGC
AGTTACCGTGGGCCCGTCGCGGCGGGGTCCGCTGCGTGCGGCCATGCAGATCCGGCGCATCGATCCGTGGGCGACGCTCA
AGGTGTCGCTGGTGCTGTCGGTGGTGTTCTTCTTCGTCTGGATGATCGCCGTCGCCATGCTGTATCTGGTGCTCGGCGCG
ATGGGTGTGTGGTCGAAGCTCAACGAGAACGTGGGTGAGCTCATCACCAACAGCGGCGGCGGTGAGCTGGTGTCCAGCGG
CACCATCTTCGGTACCGCGCTGCTGATCGGTTTGGTGAATATCGTCCTGATGACCGCGGCCGCGACCATTGGTGCGTTCA
TCTACAACTTGACCACCGATCTTGTCGGAGGCATCGAGATCACATTGGCCGATCGTGACTAA

Upstream 100 bases:

>100_bases
GGCGACACCCTTTTGGCGATCGCGCATAATGCCGATGAGGGAGATGCTGACCCCGATGAGGATGCAGCCGGCACGACCGC
AGGCGAGTAAGGAGCTGTAG

Downstream 100 bases:

>100_bases
CGGTTTGGGATGCAACCCATCCGTGGGGTAATCTCTGCGTTCGGCTCAGGGGCTATAGCTCAGGCGGTTAGAGCGCTTCG
CTGATAACGAAGAGGTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSSPNDPGESGANERPVDQADLPPWQRAERRRGSHAAATGPQRIPDREPRPGGAPTEIIPIVDDASAPPTAPTSAPRPSG
RPSAGLDARLSRFISGTAAPAGFTTPPARAEADPEPEPYDEVPERPERSERADRPEPPRAGTPWGESGAQEPVRASKSAL
KNEDLPDLSGPVPRPPRRSDAAQGGSAVTVGPSRRGPLRAAMQIRRIDPWATLKVSLVLSVVFFFVWMIAVAMLYLVLGA
MGVWSKLNENVGELITNSGGGELVSSGTIFGTALLIGLVNIVLMTAAATIGAFIYNLTTDLVGGIEITLADRD

Sequences:

>Translated_313_residues
MSSPNDPGESGANERPVDQADLPPWQRAERRRGSHAAATGPQRIPDREPRPGGAPTEIIPIVDDASAPPTAPTSAPRPSG
RPSAGLDARLSRFISGTAAPAGFTTPPARAEADPEPEPYDEVPERPERSERADRPEPPRAGTPWGESGAQEPVRASKSAL
KNEDLPDLSGPVPRPPRRSDAAQGGSAVTVGPSRRGPLRAAMQIRRIDPWATLKVSLVLSVVFFFVWMIAVAMLYLVLGA
MGVWSKLNENVGELITNSGGGELVSSGTIFGTALLIGLVNIVLMTAAATIGAFIYNLTTDLVGGIEITLADRD
>Mature_312_residues
SSPNDPGESGANERPVDQADLPPWQRAERRRGSHAAATGPQRIPDREPRPGGAPTEIIPIVDDASAPPTAPTSAPRPSGR
PSAGLDARLSRFISGTAAPAGFTTPPARAEADPEPEPYDEVPERPERSERADRPEPPRAGTPWGESGAQEPVRASKSALK
NEDLPDLSGPVPRPPRRSDAAQGGSAVTVGPSRRGPLRAAMQIRRIDPWATLKVSLVLSVVFFFVWMIAVAMLYLVLGAM
GVWSKLNENVGELITNSGGGELVSSGTIFGTALLIGLVNIVLMTAAATIGAFIYNLTTDLVGGIEITLADRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0007 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021949 [H]

Pfam domain/function: PF12089 DUF3566 [H]

EC number: NA

Molecular weight: Translated: 32979; Mature: 32848

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPNDPGESGANERPVDQADLPPWQRAERRRGSHAAATGPQRIPDREPRPGGAPTEIIP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
IVDDASAPPTAPTSAPRPSGRPSAGLDARLSRFISGTAAPAGFTTPPARAEADPEPEPYD
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
EVPERPERSERADRPEPPRAGTPWGESGAQEPVRASKSALKNEDLPDLSGPVPRPPRRSD
HCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
AAQGGSAVTVGPSRRGPLRAAMQIRRIDPWATLKVSLVLSVVFFFVWMIAVAMLYLVLGA
HHCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGVWSKLNENVGELITNSGGGELVSSGTIFGTALLIGLVNIVLMTAAATIGAFIYNLTTD
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGGIEITLADRD
HHCCEEEEEECCC
>Mature Secondary Structure 
SSPNDPGESGANERPVDQADLPPWQRAERRRGSHAAATGPQRIPDREPRPGGAPTEIIP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
IVDDASAPPTAPTSAPRPSGRPSAGLDARLSRFISGTAAPAGFTTPPARAEADPEPEPYD
EECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
EVPERPERSERADRPEPPRAGTPWGESGAQEPVRASKSALKNEDLPDLSGPVPRPPRRSD
HCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
AAQGGSAVTVGPSRRGPLRAAMQIRRIDPWATLKVSLVLSVVFFFVWMIAVAMLYLVLGA
HHCCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGVWSKLNENVGELITNSGGGELVSSGTIFGTALLIGLVNIVLMTAAATIGAFIYNLTTD
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGGIEITLADRD
HHCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]