| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627125
Identifier: 169627125
GI number: 169627125
Start: 16690
End: 17262
Strand: Direct
Name: 169627125
Synonym: MAB_0017
Alternate gene names: NA
Gene position: 16690-17262 (Clockwise)
Preceding gene: 169627124
Following gene: 169627127
Centisome position: 0.33
GC content: 63.35
Gene sequence:
>573_bases ATGGCCGCCGATCGCCCCACCATCTACTTTGCCTCCCAACGGGACTGGGAAGCATGGCTGGAACAGAACCACGAGGACTC CCCCGGCGTCTGGATCAAGATGGCCAAGAAGGCCAGCGGCATTGCCAGCCTCAACCACAAGGAAGCCTTGGAAGAAGCGT TGTGCTTCGGGTGGATCGATGGCCAGGCCAGGTCACTCGACGAGCAGTACACCTTGCGCATGTTCACTCCGCGGCGTCCC CGCAGCACCTGGTCGAAGATCAACGTCGGCCACATCGAGCGACTCGCCACAGAGGGCCGCATCAGACCCGCAGGTCAACG CGAAGTCGACGCCGCCAAGGCCGATGGTCGTTGGGACGCCGCCTATAGTTCACAAGCCACCATCGAGGTGCCCGGGGACT TCGCGCGCGCCCTCGAATCCGAGCCCGGAGCCTTGGCGTTCTTCGACTCCCTGAACAAGACGGCGCGGTGGCCGTTCCTG TTTCGGCTCACCACCATCAAGAAGCCGGAGACCCGCGCCCGGCGTATCGCGCAGTATGTCGAGTTACTGGCCGAGGGAAA GACGTTGCACTGA
Upstream 100 bases:
>100_bases TTGCGTGTATCAACACTCGGGGAAACCACGGCTTCGTCCTCCGCCCAGAAGGCAGTTGGACCTTCTAAGCAGTGTCACCG CACACCCATAGAGTGACCAC
Downstream 100 bases:
>100_bases GGCGATCTACGCCTTGTGTGCCACCGCCACGATGTAGTCCGAGTGCAACGAGAACAACCGCATACCCACCGAGTTGAACT GGGCCCGCAGCAACGGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAADRPTIYFASQRDWEAWLEQNHEDSPGVWIKMAKKASGIASLNHKEALEEALCFGWIDGQARSLDEQYTLRMFTPRRP RSTWSKINVGHIERLATEGRIRPAGQREVDAAKADGRWDAAYSSQATIEVPGDFARALESEPGALAFFDSLNKTARWPFL FRLTTIKKPETRARRIAQYVELLAEGKTLH
Sequences:
>Translated_190_residues MAADRPTIYFASQRDWEAWLEQNHEDSPGVWIKMAKKASGIASLNHKEALEEALCFGWIDGQARSLDEQYTLRMFTPRRP RSTWSKINVGHIERLATEGRIRPAGQREVDAAKADGRWDAAYSSQATIEVPGDFARALESEPGALAFFDSLNKTARWPFL FRLTTIKKPETRARRIAQYVELLAEGKTLH >Mature_189_residues AADRPTIYFASQRDWEAWLEQNHEDSPGVWIKMAKKASGIASLNHKEALEEALCFGWIDGQARSLDEQYTLRMFTPRRPR STWSKINVGHIERLATEGRIRPAGQREVDAAKADGRWDAAYSSQATIEVPGDFARALESEPGALAFFDSLNKTARWPFLF RLTTIKKPETRARRIAQYVELLAEGKTLH
Specific function: Unknown
COG id: COG4430
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21605; Mature: 21473
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADRPTIYFASQRDWEAWLEQNHEDSPGVWIKMAKKASGIASLNHKEALEEALCFGWID CCCCCCEEEEECCCCHHHHHHCCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHCCC GQARSLDEQYTLRMFTPRRPRSTWSKINVGHIERLATEGRIRPAGQREVDAAKADGRWDA CHHHCCCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC AYSSQATIEVPGDFARALESEPGALAFFDSLNKTARWPFLFRLTTIKKPETRARRIAQYV CCCCCCEEECCHHHHHHHCCCCCEEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH ELLAEGKTLH HHHHCCCCCC >Mature Secondary Structure AADRPTIYFASQRDWEAWLEQNHEDSPGVWIKMAKKASGIASLNHKEALEEALCFGWID CCCCCEEEEECCCCHHHHHHCCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHCCC GQARSLDEQYTLRMFTPRRPRSTWSKINVGHIERLATEGRIRPAGQREVDAAKADGRWDA CHHHCCCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCC AYSSQATIEVPGDFARALESEPGALAFFDSLNKTARWPFLFRLTTIKKPETRARRIAQYV CCCCCCEEECCHHHHHHHCCCCCEEEEHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHH ELLAEGKTLH HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA