| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627124
Identifier: 169627124
GI number: 169627124
Start: 14598
End: 16145
Strand: Direct
Name: 169627124
Synonym: MAB_0016
Alternate gene names: NA
Gene position: 14598-16145 (Clockwise)
Preceding gene: 169627123
Following gene: 169627125
Centisome position: 0.29
GC content: 59.04
Gene sequence:
>1548_bases ATGCCGACGAAATCAGAAATTCTTAACTGGCGGACCGACCACCTTGGGGCTGCGGCCAAGACGTGGGGGGACCAAGCTAC GCAGCTCGACACCGCAGTCAACGGTGCGCAGGGGCTGCTGGACGGGCTGCGGGGGTCCGGCCAGTTTGTCGAGGCGTTTC GGACGCGGCTGAAAAGCTATATCGACAAAACTCGGCCAAAGGTAGACAAATTGAAGTCTGCCAAGCAGGTTGCGGAATCT TCCGAACAACAGTTGAAGGGCGCGAAGGACAAGGCCGTCTATGCGGTCCACGATCCCGAGGACGAAGACTTCAACGTGAA CGAGGACCTATCAGTCACGGAGCGACGGTCACATTCGGGCTTGGACCGTCTGAAGAGGGCAATACGTCGGAGGTGGCTGC AGGGGATTTTGCACACCCGGGCGCAGGAGCTAGTGGCGACGGATAACGCGATCGCTCGGAAGCTACACGAAATCGCGCAA GATTTAAGCAATTTCCATCTTGAAGGGCCGGATGGCAATACGGACTTCAGTGGAGACCCGAACCACCCGAAGATCATGGG GCCAGCGAAACCACTGGGACCGATCGAGCAGGAAGACTATGACCTCGGCTACACGTTCCTGGATGAAAACGGGAACCCCC TTCCGATGCTGGATGAGAACGGGAACGTGGTGATTGACCCGAAAACCGGTAGGCCGGTTCCGGATTCCGTGTGGGGGGAC CCGGCGGACAACAATGCGGATGGGTCTCCACGAGTGCCGCACCCACCCCGAGACCACCACTTTGCGGATATGGACGCCAA CGACCCATATCGAACGCTTCCGACCGGGACGACGGTAGGTCCGAATGGCGAGAGGATAGCTCTTGTAAGTAGGCCTCCGG ATGATCCTGCGTGGGCAGAAAATCAAACCAAAAACGGAAAGAGCGTGTATGTCACTCAAACTGAGGCATACGACGTTACG AGGCAGCCGCCCCAAAGTCTGGGCAAGTTGCAGGGTGTGGATGGCAGCAAGGTCTACCAGGGAAGCATCGTTTACGACAA GGCATCGGGAAGAATGTATGTCGTTGGAAACCATGGTGATGGGAGCGGCGACACGGCCCGGGGTATGTGGCGGTCGGATC CGGTCGATCCCAATCATCCGAACGATTGGGTGAAAACACTGCGGTATCAAGGCGACGTTCCGAGTCTGCCGGGATCGCGT GAGAGCAGTCTGGTCGCGTTGCCGCATGGCGGCGTTGCGCTGTTTGGAGCCGACGACTATGCCCCAGCGGAAGGCCGCAA TATGGCAGTCGGTGCAATTAGCGCGGCAACTCCCGAGGGTCTGCTGCAGGCCAGGCCAGTTACCGACCTACTGCCTGCTG GGAAGACTCCGTGGCCCGGAGGCGCGCCTTACGCAGCTCTTCCGACCGGGGTTCACTGGGATCCAGCGCTGCGCGCCGAT GTCGTAGACACCCGTGTCAGTATTTGGCGAGATGTCCCGGGTGTCCGGGGTGCATACCCTCCTGTTACGTATCAAACGTC GGTGCCGATATTTCAACCGAATTCCTAG
Upstream 100 bases:
>100_bases AGCGTTCTTAGGCCGCGCGGTTCAAGCTTTCGAGAGCATGGATCAGAACAACGCGGCCAACATCCATTCCTCCGGCCCAC AGAATATGTAGGCCACGCCA
Downstream 100 bases:
>100_bases GAGAAGTCATGATGACGATCGGGCGACTGACGGCGGGCATCGTCATTGCAGCGGCTGCAATCGCATGCCAAGCGATTCCG GCGCCGGAAGCCGCGGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MPTKSEILNWRTDHLGAAAKTWGDQATQLDTAVNGAQGLLDGLRGSGQFVEAFRTRLKSYIDKTRPKVDKLKSAKQVAES SEQQLKGAKDKAVYAVHDPEDEDFNVNEDLSVTERRSHSGLDRLKRAIRRRWLQGILHTRAQELVATDNAIARKLHEIAQ DLSNFHLEGPDGNTDFSGDPNHPKIMGPAKPLGPIEQEDYDLGYTFLDENGNPLPMLDENGNVVIDPKTGRPVPDSVWGD PADNNADGSPRVPHPPRDHHFADMDANDPYRTLPTGTTVGPNGERIALVSRPPDDPAWAENQTKNGKSVYVTQTEAYDVT RQPPQSLGKLQGVDGSKVYQGSIVYDKASGRMYVVGNHGDGSGDTARGMWRSDPVDPNHPNDWVKTLRYQGDVPSLPGSR ESSLVALPHGGVALFGADDYAPAEGRNMAVGAISAATPEGLLQARPVTDLLPAGKTPWPGGAPYAALPTGVHWDPALRAD VVDTRVSIWRDVPGVRGAYPPVTYQTSVPIFQPNS
Sequences:
>Translated_515_residues MPTKSEILNWRTDHLGAAAKTWGDQATQLDTAVNGAQGLLDGLRGSGQFVEAFRTRLKSYIDKTRPKVDKLKSAKQVAES SEQQLKGAKDKAVYAVHDPEDEDFNVNEDLSVTERRSHSGLDRLKRAIRRRWLQGILHTRAQELVATDNAIARKLHEIAQ DLSNFHLEGPDGNTDFSGDPNHPKIMGPAKPLGPIEQEDYDLGYTFLDENGNPLPMLDENGNVVIDPKTGRPVPDSVWGD PADNNADGSPRVPHPPRDHHFADMDANDPYRTLPTGTTVGPNGERIALVSRPPDDPAWAENQTKNGKSVYVTQTEAYDVT RQPPQSLGKLQGVDGSKVYQGSIVYDKASGRMYVVGNHGDGSGDTARGMWRSDPVDPNHPNDWVKTLRYQGDVPSLPGSR ESSLVALPHGGVALFGADDYAPAEGRNMAVGAISAATPEGLLQARPVTDLLPAGKTPWPGGAPYAALPTGVHWDPALRAD VVDTRVSIWRDVPGVRGAYPPVTYQTSVPIFQPNS >Mature_514_residues PTKSEILNWRTDHLGAAAKTWGDQATQLDTAVNGAQGLLDGLRGSGQFVEAFRTRLKSYIDKTRPKVDKLKSAKQVAESS EQQLKGAKDKAVYAVHDPEDEDFNVNEDLSVTERRSHSGLDRLKRAIRRRWLQGILHTRAQELVATDNAIARKLHEIAQD LSNFHLEGPDGNTDFSGDPNHPKIMGPAKPLGPIEQEDYDLGYTFLDENGNPLPMLDENGNVVIDPKTGRPVPDSVWGDP ADNNADGSPRVPHPPRDHHFADMDANDPYRTLPTGTTVGPNGERIALVSRPPDDPAWAENQTKNGKSVYVTQTEAYDVTR QPPQSLGKLQGVDGSKVYQGSIVYDKASGRMYVVGNHGDGSGDTARGMWRSDPVDPNHPNDWVKTLRYQGDVPSLPGSRE SSLVALPHGGVALFGADDYAPAEGRNMAVGAISAATPEGLLQARPVTDLLPAGKTPWPGGAPYAALPTGVHWDPALRADV VDTRVSIWRDVPGVRGAYPPVTYQTSVPIFQPNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55926; Mature: 55795
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKSEILNWRTDHLGAAAKTWGDQATQLDTAVNGAQGLLDGLRGSGQFVEAFRTRLKSY CCCHHHHHCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IDKTRPKVDKLKSAKQVAESSEQQLKGAKDKAVYAVHDPEDEDFNVNEDLSVTERRSHSG HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCC LDRLKRAIRRRWLQGILHTRAQELVATDNAIARKLHEIAQDLSNFHLEGPDGNTDFSGDP HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCC NHPKIMGPAKPLGPIEQEDYDLGYTFLDENGNPLPMLDENGNVVIDPKTGRPVPDSVWGD CCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCEEECCCCCCCCCCCCCCC PADNNADGSPRVPHPPRDHHFADMDANDPYRTLPTGTTVGPNGERIALVSRPPDDPAWAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCC NQTKNGKSVYVTQTEAYDVTRQPPQSLGKLQGVDGSKVYQGSIVYDKASGRMYVVGNHGD CCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECEEEEEECCCEEEEEECCCC GSGDTARGMWRSDPVDPNHPNDWVKTLRYQGDVPSLPGSRESSLVALPHGGVALFGADDY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEECCCC APAEGRNMAVGAISAATPEGLLQARPVTDLLPAGKTPWPGGAPYAALPTGVHWDPALRAD CCCCCCCEEEEEECCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VVDTRVSIWRDVPGVRGAYPPVTYQTSVPIFQPNS HHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure PTKSEILNWRTDHLGAAAKTWGDQATQLDTAVNGAQGLLDGLRGSGQFVEAFRTRLKSY CCHHHHHCCCHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IDKTRPKVDKLKSAKQVAESSEQQLKGAKDKAVYAVHDPEDEDFNVNEDLSVTERRSHSG HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCC LDRLKRAIRRRWLQGILHTRAQELVATDNAIARKLHEIAQDLSNFHLEGPDGNTDFSGDP HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCC NHPKIMGPAKPLGPIEQEDYDLGYTFLDENGNPLPMLDENGNVVIDPKTGRPVPDSVWGD CCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCEEECCCCCCCCCCCCCCC PADNNADGSPRVPHPPRDHHFADMDANDPYRTLPTGTTVGPNGERIALVSRPPDDPAWAE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCC NQTKNGKSVYVTQTEAYDVTRQPPQSLGKLQGVDGSKVYQGSIVYDKASGRMYVVGNHGD CCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECEEEEEECCCEEEEEECCCC GSGDTARGMWRSDPVDPNHPNDWVKTLRYQGDVPSLPGSRESSLVALPHGGVALFGADDY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEECCCC APAEGRNMAVGAISAATPEGLLQARPVTDLLPAGKTPWPGGAPYAALPTGVHWDPALRAD CCCCCCCEEEEEECCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VVDTRVSIWRDVPGVRGAYPPVTYQTSVPIFQPNS HHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA