Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169627119

Identifier: 169627119

GI number: 169627119

Start: 11717

End: 12328

Strand: Reverse

Name: 169627119

Synonym: MAB_0011c

Alternate gene names: NA

Gene position: 12328-11717 (Counterclockwise)

Preceding gene: 169627120

Following gene: 169627118

Centisome position: 0.24

GC content: 58.82

Gene sequence:

>612_bases
GTGAAGATCTTCCATCACATCGCGCTCATGTCGGCGGTGGCACTCACCGTCGTTGGCTGTGGCGGCAATACCGTGTCTGG
GGACGCGATTACTGCCACAAATACTGCGCGCGCCGGACACGATACTGCCACAAGTTCCTCACCTACTGTCACTAACACGC
TCCCCGGACCGCACCCGCCCCCTAACCAAAATAGTGACGGCACTACCTTCGATCCCTGTTTGGCCTACAGTGCGGCGGAA
TTGAGCAAATGGGGACTCGATCCCGCCACAGTTAAGGACATCGGCGCCACCACGACACTCCAGCGGGGTTGCAGCTGGCA
GGGGGACGGCTGGTACGTCCAGCAACTCGTGATCAATCGCTCCATTTCAGAGTACTTGGATACCAATAACTATCCCGACG
CCAAGCCCGTGGCTATCGCCGGACTGCAAGGCTCGACACATCGCTTGGGACAATCCGGAACTGCTTTCTGCTCAGCGCAG
ATTCCGTCCCAACGCGCCGTCGTCGCCACCCTCGTCAGCCTTGACAGACCAAGCGCGCAGAAAGCGATCGGAGATGCCTG
CACAAAAGCCATCGAGATCGCCACCGACACTGTCCCGAAGCTTCCGAAATAA

Upstream 100 bases:

>100_bases
CCAAGATCGACCACGTGCTGGCTATGGAAGTTCTGTACAACAACATGGACGCCTACAACGCGGGCCGCGTCTTCGATCAC
AAGCTGTCGGTCGAATACAA

Downstream 100 bases:

>100_bases
CATGAGAGGTAACAACCATGTCCGGTGATGGCTGGGATGGCATGTCACATGCCGAGATCGTGGGCAAGCTTAGTCAGCTG
AAGCCCGACAACGCCTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPPPNQNSDGTTFDPCLAYSAAE
LSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINRSISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQ
IPSQRAVVATLVSLDRPSAQKAIGDACTKAIEIATDTVPKLPK

Sequences:

>Translated_203_residues
MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPPPNQNSDGTTFDPCLAYSAAE
LSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINRSISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQ
IPSQRAVVATLVSLDRPSAQKAIGDACTKAIEIATDTVPKLPK
>Mature_203_residues
MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPPPNQNSDGTTFDPCLAYSAAE
LSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINRSISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQ
IPSQRAVVATLVSLDRPSAQKAIGDACTKAIEIATDTVPKLPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21090; Mature: 21090

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPP
CHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCC
PNQNSDGTTFDPCLAYSAAELSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINR
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHH
SISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQIPSQRAVVATLVSLDRPSAQ
HHHHHHCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHH
KAIGDACTKAIEIATDTVPKLPK
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPP
CHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCC
PNQNSDGTTFDPCLAYSAAELSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINR
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHH
SISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQIPSQRAVVATLVSLDRPSAQ
HHHHHHCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHH
KAIGDACTKAIEIATDTVPKLPK
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA