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The map label for this gene is rfbU

Identifier: 16765416

GI number: 16765416

Start: 2166238

End: 2167299

Strand: Reverse

Name: rfbU

Synonym: STM2086

Alternate gene names: 16765416

Gene position: 2167299-2166238 (Counterclockwise)

Preceding gene: 16765417

Following gene: 16765415

Centisome position: 44.62

GC content: 33.52

Gene sequence:

>1062_bases
ATGATCGTAAACCTATCACGTTTAGGTAAAAGTGGTACGGGAATGTGGCAATACTCGATTAAATTTTTAACGGCACTGCG
AGAAATAGCTGATGTTGACGCAATAATCTGTAGCAAGGTACACGCTGATTATTTTGAAAAGCTCGGTTATGCAGTAGTTA
CTGTTCCGAATATTGTTAGCAACACATCAAAAACATCGCGACTTAGACCATTAGTATGGTATGTATATAGTTACTGGCTT
GCGCTGAGGGTTTTAATTAAGTTTGGTAATAAAAAATTGGTGTGTACTACACATCACACTATCCCCTTACTGAGAAACCA
AACGATAACCGTACATGATATAAGACCTTTTTATTATCCAGATAGTTTTATTCAGAAAGTGTATTTTCGCTTTTTATTAA
AAATGTCCGTTAAGCGATGTAAGCATGTTTTAACGGTATCTTATACCGTTAAAGATAGCATTGCTAAAACTTATAATGTA
GATAGTGAGAAAATATCAGTAATTTATAATAGTGTTAATAAATCTGATTTTATACAAAAAAAAGAAAAAGAGAATTACTT
TTTAGCTGTTGGTGCAAGTTGGCCACATAAAAATATTCATTCATTCATAAAAAATAAAAAAGTTTGGTCTGACTCTTATA
ATTTAATTATTGTATGTGGTCGTACTGACTATGCAATGTCTCTCCAACAAATGGTCGTTGATCTGGAACTAAAAGATAAA
GTGACTTTTTTACATGAAGTCTCATTTAATGAATTAAAGATTTTATATTCTAAAGCCTACGCGCTTGTTTATCCATCTAT
TGATGAGGGTTTTGGTATACCTCCTATTGAAGCGATGGCATCAAATACTCCAGTTATAGTGTCCGATATACCAGTATTTC
ATGAAGTGTTAACCAATGGTGCATTATATGTGAATCCGGATGATGAAAAAAGCTGGCAGAGTGCAATTAAAAATATAGAG
CAGTTGCCTGATGCAATTTCCCGATTTAACAACTATGTCGCACGGTATGACTTTGATAATATGAAGCAGATGGTTGGCAA
TTGGTTGGCGGAATCAAAATAA

Upstream 100 bases:

>100_bases
CTCTATTATTAAGAATTACACCTAGTGTAAGCTTCGTAATATTATTTATCCTTATGATTATTGCTTTAAAGATGCGTATG
GAAAAACGGAGAGCTATTCA

Downstream 100 bases:

>100_bases
ATGAAAATAACATTAATTATTCCCACATATAATGCAGGGTCGCTTTGGCCTAATGTTCTGGATGCGATTAAGCAGCAAAC
TATATATCCGGATAAATTGA

Product: mannosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYVYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYPDSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVNKSDFIQKKEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELKDK
VTFLHEVSFNELKILYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIKNIE
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK

Sequences:

>Translated_353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYVYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYPDSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVNKSDFIQKKEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELKDK
VTFLHEVSFNELKILYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIKNIE
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
>Mature_353_residues
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVSNTSKTSRLRPLVWYVYSYWL
ALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYPDSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNV
DSEKISVIYNSVNKSDFIQKKEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELKDK
VTFLHEVSFNELKILYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNGALYVNPDDEKSWQSAIKNIE
QLPDAISRFNNYVARYDFDNMKQMVGNWLAESK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RFBU_SALTY (P26402)

Other databases:

- EMBL:   X56793
- EMBL:   AE006468
- PIR:   S15310
- RefSeq:   NP_461031.1
- ProteinModelPortal:   P26402
- PRIDE:   P26402
- GeneID:   1253607
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2086
- HOGENOM:   HBG614232
- OMA:   HASETPR
- ProtClustDB:   CLSK894268
- BioCyc:   STYP99287:STM2086-MONOMER
- InterPro:   IPR001296

Pfam domain/function: PF00534 Glycos_transf_1

EC number: NA

Molecular weight: Translated: 40683; Mature: 40683

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVS
CEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHC
NTSKTSRLRPLVWYVYSYWLALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEECCCCCCC
DSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNVDSEKISVIYNSVNKSDFIQK
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHCCCCCHHEEEEEECCCHHHHHHH
KEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELKDK
HCCCCEEEEEECCCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
VTFLHEVSFNELKILYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNG
HHHHHHCCHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHCC
ALYVNPDDEKSWQSAIKNIEQLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVNLSRLGKSGTGMWQYSIKFLTALREIADVDAIICSKVHADYFEKLGYAVVTVPNIVS
CEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHC
NTSKTSRLRPLVWYVYSYWLALRVLIKFGNKKLVCTTHHTIPLLRNQTITVHDIRPFYYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEECCCCCCC
DSFIQKVYFRFLLKMSVKRCKHVLTVSYTVKDSIAKTYNVDSEKISVIYNSVNKSDFIQK
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHCCCCCHHEEEEEECCCHHHHHHH
KEKENYFLAVGASWPHKNIHSFIKNKKVWSDSYNLIIVCGRTDYAMSLQQMVVDLELKDK
HCCCCEEEEEECCCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
VTFLHEVSFNELKILYSKAYALVYPSIDEGFGIPPIEAMASNTPVIVSDIPVFHEVLTNG
HHHHHHCCHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHCCCCCEEEECCHHHHHHHHCC
ALYVNPDDEKSWQSAIKNIEQLPDAISRFNNYVARYDFDNMKQMVGNWLAESK
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609