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The map label for this gene is rfbN

Identifier: 16765415

GI number: 16765415

Start: 2165293

End: 2166237

Strand: Reverse

Name: rfbN

Synonym: STM2085

Alternate gene names: 16765415

Gene position: 2166237-2165293 (Counterclockwise)

Preceding gene: 16765416

Following gene: 16765414

Centisome position: 44.6

GC content: 37.46

Gene sequence:

>945_bases
ATGAAAATAACATTAATTATTCCCACATATAATGCAGGGTCGCTTTGGCCTAATGTTCTGGATGCGATTAAGCAGCAAAC
TATATATCCGGATAAATTGATTGTTATAGACTCAGGTTCTAAAGATGAAACGGTTCCGTTAGCCTCAGACCTGAAAAATA
TATCAATATTTAATATTGACTCTAAAGATTTTAATCATGGAGGAACCAGAAATTTAGCAGTTGCAAAAACTCTGGACGCT
GATGTTATAATTTTTCTAACGCAAGATGCAATTCTCGCGGATTCGGATGCAATTAAAAATTTGGTTTATTATTTTTCAGA
TCCATTGATAGCAGCGGTTTGTGGTAGACAACTTCCTCATAAAGATGCTAATCCCCTTGCAGTGCATGCCAGAAATTTTA
ATTATAGTTCAAAATCTATTGTTAAAAGTAAGGCAGATATAGAAAAATTGGGTATTAAAACTGTATTTATGTCCAATTCT
TTTGCTGCCTATCGCCGTTCCGTTTTTGAAGAGTTAAGTGGGTTTCCTGAACATACAATTCTTGCCGAGGATATGTTTAT
GGCGGCTAAGATGATTCAGGCGGGTTATAAGGTCGCCTACTGCGCTGAAGCGGTGGTAAGACACTCCCATAATTATACCC
CGCGAGAAGAGTTTCAACGATATTTTGATACTGGTGTATTTCATGCTTGTTCTCCGTGGATTCAGCGTGACTTTGGCGGA
GCCGGTGGTGAGGGTTTCCGCTTCGTAAAATCAGAGATTCAATTCCTGCTTAAAAATGCACCGTTCTGGATTCCAAGAGC
TTTATTAACAACCTTTGCTAAATTCTTGGGTTACAAATTAGGCAAGCATTGGCAATCTTTACCGTTGTCTACATGTCGCT
ATTTTAGCATGTACAAGAGTTATTGGAATAATATCCAATATTCTTCGTCAAAAGAGATAAAATAA

Upstream 100 bases:

>100_bases
GTTGCCTGATGCAATTTCCCGATTTAACAACTATGTCGCACGGTATGACTTTGATAATATGAAGCAGATGGTTGGCAATT
GGTTGGCGGAATCAAAATAA

Downstream 100 bases:

>100_bases
ATGTCTTTTCTTCCCGTAATTATGGCTGGCGGCACAGGTAGCCGTTTATGGCCGCTTTCACGCGAATATCATCCGAAGCA
GTTTCTAAGCGTTGAAGGTA

Product: rhamnosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNIDSKDFNHGGTRNLAVAKTLDA
DVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPHKDANPLAVHARNFNYSSKSIVKSKADIEKLGIKTVFMSNS
FAAYRRSVFEELSGFPEHTILAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKSYWNNIQYSSSKEIK

Sequences:

>Translated_314_residues
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNIDSKDFNHGGTRNLAVAKTLDA
DVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPHKDANPLAVHARNFNYSSKSIVKSKADIEKLGIKTVFMSNS
FAAYRRSVFEELSGFPEHTILAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKSYWNNIQYSSSKEIK
>Mature_314_residues
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNIDSKDFNHGGTRNLAVAKTLDA
DVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPHKDANPLAVHARNFNYSSKSIVKSKADIEKLGIKTVFMSNS
FAAYRRSVFEELSGFPEHTILAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKSYWNNIQYSSSKEIK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RFBN_SALTY (P26403)

Other databases:

- EMBL:   X56793
- EMBL:   AE006468
- PIR:   S15311
- RefSeq:   NP_461030.1
- ProteinModelPortal:   P26403
- PRIDE:   P26403
- GeneID:   1253606
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM2085
- NMPDR:   fig|99287.1.peg.2010
- HOGENOM:   HBG427669
- OMA:   FDIGVFH
- ProtClustDB:   CLSK894267
- BioCyc:   STYP99287:STM2085-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: NA

Molecular weight: Translated: 35509; Mature: 35509

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNID
CEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCEEEECC
SKDFNHGGTRNLAVAKTLDADVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPH
CCCCCCCCCCCEEEEEECCCCEEEEEECCCHHCCHHHHHHHHHHHCCHHHHHHHCCCCCC
KDANPLAVHARNFNYSSKSIVKSKADIEKLGIKTVFMSNSFAAYRRSVFEELSGFPEHTI
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCHHH
LAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCHHHHHHCCC
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKS
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YWNNIQYSSSKEIK
HHCCCCCCCCCCCC
>Mature Secondary Structure
MKITLIIPTYNAGSLWPNVLDAIKQQTIYPDKLIVIDSGSKDETVPLASDLKNISIFNID
CEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCCCEEEECC
SKDFNHGGTRNLAVAKTLDADVIIFLTQDAILADSDAIKNLVYYFSDPLIAAVCGRQLPH
CCCCCCCCCCCEEEEEECCCCEEEEEECCCHHCCHHHHHHHHHHHCCHHHHHHHCCCCCC
KDANPLAVHARNFNYSSKSIVKSKADIEKLGIKTVFMSNSFAAYRRSVFEELSGFPEHTI
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCHHH
LAEDMFMAAKMIQAGYKVAYCAEAVVRHSHNYTPREEFQRYFDTGVFHACSPWIQRDFGG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCHHHHHHCCC
AGGEGFRFVKSEIQFLLKNAPFWIPRALLTTFAKFLGYKLGKHWQSLPLSTCRYFSMYKS
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YWNNIQYSSSKEIK
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609