| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is pduT [C]
Identifier: 16765384
GI number: 16765384
Start: 2130094
End: 2130648
Strand: Direct
Name: pduT [C]
Synonym: STM2054
Alternate gene names: 16765384
Gene position: 2130094-2130648 (Clockwise)
Preceding gene: 16765383
Following gene: 16765385
Centisome position: 43.85
GC content: 58.38
Gene sequence:
>555_bases ATGTCTCAGGCTATAGGAATTTTAGAACTCACCAGCATCGCCAAAGGCATGGAGCTTGGTGATGCCATGCTGAAAAGCGC CAACGTCGATCTACTGGTCAGCAAGACCATCTGTCCGGGGAAGTTTTTACTGATGCTGGGCGGCGATATCGGCGCTATCC AGCAGGCCATTGAAACCGGTACGTCGCAGGCCGGCGAGATGCTCGTCGACAGCCTGGTGCTGGCGAATATTCATCCCAGC GTACTTCCGGCCATCAGCGGCCTGAACAGCGTCGATAAGCGCCAGGCGGTAGGTATCGTCGAAACCTGGAGCGTGGCGGC CTGCATTAGCGCCGCAGACCGGGCGGTGAAAGGCTCAAACGTCACCCTGGTGCGGGTGCATATGGCCTTCGGTATCGGCG GTAAATGCTACATGGTGGTGGCGGGCGACGTTTCTGACGTCAATAACGCCGTGACGGTTGCCAGCGAAAGCGCGGGCGAG AAAGGGTTGTTGGTTTACCGTTCGGTGATCCCACGCCCGCATGAAGCCATGTGGCGACAGATGGTGGAGGGGTAA
Upstream 100 bases:
>100_bases ATGTCCCGCCTGGCGCGCTCGGCGCACCCATTCACGCCAGCATCGACGGCGTTGTATCGGCCATCAGCGAACAGGCCATC ACTGTTGTAAGAGGTTAACC
Downstream 100 bases:
>100_bases TGGAAAGACAACCGACAACGGATCGCATGATTCAGGAATACGTGCCGGGGAAACAGGTCACTCTCGCGCACCTGATTGCT AATCCAGGGAAAGATCTCTT
Product: polyhedral body protein
Products: NA
Alternate protein names: BMC Domain Protein; Propanediol Utilization Protein; Propanediol Utilization Protein PduT; Propanediol Utilization Protein Polyhedral Bodies; PduT Protein; Propanediol Utilization Polyhedral Bodies PduT; Ethanolamine/Propanediol Utilization Protein; Ethanolamine Utilization Protein; Propanediol Utilization Polyhedral Body Protein PduT; Microcompartment Shellprotein; Propanediol Utilization Polyhedral Bodies; Ethanolamine Utilization Protein EutM; Propanediol Utilization Protein-Like
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPS VLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGE KGLLVYRSVIPRPHEAMWRQMVEG
Sequences:
>Translated_184_residues MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPS VLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGE KGLLVYRSVIPRPHEAMWRQMVEG >Mature_183_residues SQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPSV LPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEK GLLVYRSVIPRPHEAMWRQMVEG
Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]
COG id: COG4577
COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19151; Mature: 19019
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAIQQAIETG CCCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHC TSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSN CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC VTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQ EEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEHHHCCCCHHHHHHH MVEG HHCC >Mature Secondary Structure SQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAIQQAIETG CCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHC TSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSN CCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC VTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQ EEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEHHHCCCCHHHHHHH MVEG HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA