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The map label for this gene is pduU

Identifier: 16765385

GI number: 16765385

Start: 2130648

End: 2130998

Strand: Direct

Name: pduU

Synonym: STM2055

Alternate gene names: 16765385

Gene position: 2130648-2130998 (Clockwise)

Preceding gene: 16765384

Following gene: 16765386

Centisome position: 43.86

GC content: 55.56

Gene sequence:

>351_bases
ATGGAAAGACAACCGACAACGGATCGCATGATTCAGGAATACGTGCCGGGGAAACAGGTCACTCTCGCGCACCTGATTGC
TAATCCAGGGAAAGATCTCTTTAAGAAGCTGGGCCTGCAGGATGCAGTGTCCGCCATTGGCATCCTTACCATCACGCCGA
GCGAAGCATCGATTATCGCCTGCGATATCGCCACCAAATCCGGCGCGGTGGAAATTGGTTTTCTCGATCGCTTTACCGGT
GCCGTGGTGCTGACCGGCGACGTTTCTGCCGTCGAGTATGCCCTCAAGCAGGTAACGCGCACGCTGGGCGAAATGATGCA
GTTCACCACTTGCTCGATCACCCGGACGTAA

Upstream 100 bases:

>100_bases
CGGTTGCCAGCGAAAGCGCGGGCGAGAAAGGGTTGTTGGTTTACCGTTCGGTGATCCCACGCCCGCATGAAGCCATGTGG
CGACAGATGGTGGAGGGGTA

Downstream 100 bases:

>100_bases
AGTCATGAAGCGTTTGATGTTTATCGGCCCCAGCCAGTGCGGAAAAACCTCGCTGACCCAAAGCCTGCGCGGCGAAGCGC
TCCATTATAAGAAAACTCAG

Product: polyhedral body protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTG
AVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT

Sequences:

>Translated_116_residues
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTG
AVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT
>Mature_116_residues
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTG
AVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4810

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutS/PduU family

Homologues:

Organism=Escherichia coli, GI87082109, Length=109, Percent_Identity=56.8807339449541, Blast_Score=131, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PDUU_SALTI (P0A1D2)

Other databases:

- EMBL:   AL627273
- EMBL:   AE014613
- RefSeq:   NP_456604.1
- RefSeq:   NP_804659.1
- PRIDE:   P0A1D2
- GeneID:   1070091
- GeneID:   1248598
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t0819
- KEGG:   sty:STY2260
- HOGENOM:   HBG304658
- OMA:   EFLERNI
- ProtClustDB:   CLSK2753019
- BioCyc:   SENT209261:T0819-MONOMER
- BioCyc:   SENT220341:STY2260-MONOMER
- InterPro:   IPR009307
- InterPro:   IPR000249
- PIRSF:   PIRSF012296
- SMART:   SM00877

Pfam domain/function: PF00936 BMC

EC number: NA

Molecular weight: Translated: 12477; Mature: 12477

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIA
CCCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHEEEEECCCCCEEEE
CDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT
EEECCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIA
CCCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHEEEEECCCCCEEEE
CDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT
EEECCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504