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The map label for this gene is ybhR [C]

Identifier: 167625733

GI number: 167625733

Start: 4643713

End: 4644849

Strand: Reverse

Name: ybhR [C]

Synonym: Shal_3828

Alternate gene names: 167625733

Gene position: 4644849-4643713 (Counterclockwise)

Preceding gene: 167625734

Following gene: 167625730

Centisome position: 88.86

GC content: 48.2

Gene sequence:

>1137_bases
ATGAGCTTCTTACAACTTATTTTCGCTGAGATAAAAGCGGTATTAGCAGATAAAACCATTGTTCTTACCGTTTTTGGTGG
CGTGCTATTTTACTCGATTCTTTACCCGCTGCCTTATCTCAATGAGGTCCCGACAAAACAGCAAGTGGTGGTAATCGATC
ATGACCACTCGTCATTGAGCCGCAAGCTTATCCGCGATGCGAATGCCAGCCCCAAAATTGAAGTGGTTGCCCAGCTAGGT
TCAATCGATGAGGCTAAGCGGTGGATTGAAACCGGGCGGGCTCATGGTCTGCTGGTGATCCCTGCGAACTTTAGGCGAGA
TCTGTTATTGGGCCGCGGTGTCACCTTAAGTTATGGCGGCGATGCCAGTTACTTTCTGATCTACTCTGCCATTGTTGAAG
GTTTAGTATCAGCAGGTTTAGATGTCAGCAAAGATGTCCAGCGCATGGGACTGCTAGACAAGGGCGAAAACGCCGCTTCG
GTAAAGCAGAGTCTTAATGTCGTTAAGCTTAATAGTATTCCCGCTTTTAACCCAAGCTTAGGGTATACGCCTTATGTGGT
GCCGGGTTTATTCCTGCTGATATTGCACCAGACTTTGCTGATTGGCACCGGAATATTAGGGGCAAGCCAATGGAAAAAGC
AGGGCTATTGGCGGCAGGTGAGCCCGATTAAATTGATTTGTGGCCGTATGGCTGCCTTTATGTTGATTTATGCGTTACTA
AGCAGTTATTACGTTGGCTATTGCTACTATTGGTATGACGTTAGTTTGCAGGCGAGTCTAGGTCAGGTTGGGCTGCTGAT
GTTGCCTTTTTTGCTCGCCACCAGCGCAGCGGGGATAGCCTTTAGCAGCTTGTTTAGCCGTCGCGATCTACCGACCCAAG
TATTACTATTGGTTTCTATGCCGATATTGTTTGTTTCAGGCTTTGTGTGGCCAATAGCGCTTATTCCCGATGGCGTGATC
GCTGTATCGCAAGTGGTGCCAGCGGTACCCGCTATTATGGCGATGTTAGAGCTAAATCAGATGGGCGCTTCGTGGCAGAG
CATTATGCCCCAGTGGTTACAATTATGGGCTATGGTCGCAGTTTACTTTGGCTTGGCCTATTGGGGCGTATCAAAGCGAT
TAAAGCCGACAGCTTAA

Upstream 100 bases:

>100_bases
GGATTTCTGTTGTTGCTCTTTCCAATCGCTATTTTGGCTAAAAAAGGCTTCCCTGTGACAGAAGAGCCCGAGCTCGACAC
ATTGGCAAAGGAGCAATAAT

Downstream 100 bases:

>100_bases
TTAACGGCTCATCTTGATTTGACTCCGCAAGACGCCGTGAACTTATCCATGAGGGCTTAACCGCAGCATCCATGCTGCAG
ATACTTACTCCATCAATACC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-Type Multidrug Transport System Protein; ABC-2 Type Transport System Permease Protein; Conserved Transporter; ABC Transporter Permease; Transport-Related Membrane Protein; ABC-2 Type Transport System Permease; Integral Membrane Protein; Multidrug ABC Transporter Permease Component; ABC-2 Type Transporter Domain Protein; Multidrug ABC Transporter Permease Protein; ABC-2 Type Transporter Family; ABC Transporter Transmembrane Protein; Permease Component Of ABC Transporter; Antibiotic Transport System Permease Protein

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSFLQLIFAEIKAVLADKTIVLTVFGGVLFYSILYPLPYLNEVPTKQQVVVIDHDHSSLSRKLIRDANASPKIEVVAQLG
SIDEAKRWIETGRAHGLLVIPANFRRDLLLGRGVTLSYGGDASYFLIYSAIVEGLVSAGLDVSKDVQRMGLLDKGENAAS
VKQSLNVVKLNSIPAFNPSLGYTPYVVPGLFLLILHQTLLIGTGILGASQWKKQGYWRQVSPIKLICGRMAAFMLIYALL
SSYYVGYCYYWYDVSLQASLGQVGLLMLPFLLATSAAGIAFSSLFSRRDLPTQVLLLVSMPILFVSGFVWPIALIPDGVI
AVSQVVPAVPAIMAMLELNQMGASWQSIMPQWLQLWAMVAVYFGLAYWGVSKRLKPTA

Sequences:

>Translated_378_residues
MSFLQLIFAEIKAVLADKTIVLTVFGGVLFYSILYPLPYLNEVPTKQQVVVIDHDHSSLSRKLIRDANASPKIEVVAQLG
SIDEAKRWIETGRAHGLLVIPANFRRDLLLGRGVTLSYGGDASYFLIYSAIVEGLVSAGLDVSKDVQRMGLLDKGENAAS
VKQSLNVVKLNSIPAFNPSLGYTPYVVPGLFLLILHQTLLIGTGILGASQWKKQGYWRQVSPIKLICGRMAAFMLIYALL
SSYYVGYCYYWYDVSLQASLGQVGLLMLPFLLATSAAGIAFSSLFSRRDLPTQVLLLVSMPILFVSGFVWPIALIPDGVI
AVSQVVPAVPAIMAMLELNQMGASWQSIMPQWLQLWAMVAVYFGLAYWGVSKRLKPTA
>Mature_377_residues
SFLQLIFAEIKAVLADKTIVLTVFGGVLFYSILYPLPYLNEVPTKQQVVVIDHDHSSLSRKLIRDANASPKIEVVAQLGS
IDEAKRWIETGRAHGLLVIPANFRRDLLLGRGVTLSYGGDASYFLIYSAIVEGLVSAGLDVSKDVQRMGLLDKGENAASV
KQSLNVVKLNSIPAFNPSLGYTPYVVPGLFLLILHQTLLIGTGILGASQWKKQGYWRQVSPIKLICGRMAAFMLIYALLS
SYYVGYCYYWYDVSLQASLGQVGLLMLPFLLATSAAGIAFSSLFSRRDLPTQVLLLVSMPILFVSGFVWPIALIPDGVIA
VSQVVPAVPAIMAMLELNQMGASWQSIMPQWLQLWAMVAVYFGLAYWGVSKRLKPTA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41501; Mature: 41369

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLQLIFAEIKAVLADKTIVLTVFGGVLFYSILYPLPYLNEVPTKQQVVVIDHDHSSLS
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHH
RKLIRDANASPKIEVVAQLGSIDEAKRWIETGRAHGLLVIPANFRRDLLLGRGVTLSYGG
HHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCEEEEECC
DASYFLIYSAIVEGLVSAGLDVSKDVQRMGLLDKGENAASVKQSLNVVKLNSIPAFNPSL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCC
GYTPYVVPGLFLLILHQTLLIGTGILGASQWKKQGYWRQVSPIKLICGRMAAFMLIYALL
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SSYYVGYCYYWYDVSLQASLGQVGLLMLPFLLATSAAGIAFSSLFSRRDLPTQVLLLVSM
HHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PILFVSGFVWPIALIPDGVIAVSQVVPAVPAIMAMLELNQMGASWQSIMPQWLQLWAMVA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VYFGLAYWGVSKRLKPTA
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SFLQLIFAEIKAVLADKTIVLTVFGGVLFYSILYPLPYLNEVPTKQQVVVIDHDHSSLS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHH
RKLIRDANASPKIEVVAQLGSIDEAKRWIETGRAHGLLVIPANFRRDLLLGRGVTLSYGG
HHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCEEEEECC
DASYFLIYSAIVEGLVSAGLDVSKDVQRMGLLDKGENAASVKQSLNVVKLNSIPAFNPSL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCC
GYTPYVVPGLFLLILHQTLLIGTGILGASQWKKQGYWRQVSPIKLICGRMAAFMLIYALL
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SSYYVGYCYYWYDVSLQASLGQVGLLMLPFLLATSAAGIAFSSLFSRRDLPTQVLLLVSM
HHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PILFVSGFVWPIALIPDGVIAVSQVVPAVPAIMAMLELNQMGASWQSIMPQWLQLWAMVA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VYFGLAYWGVSKRLKPTA
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA