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The map label for this gene is yhhJ [C]

Identifier: 167625734

GI number: 167625734

Start: 4644851

End: 4646014

Strand: Reverse

Name: yhhJ [C]

Synonym: Shal_3829

Alternate gene names: 167625734

Gene position: 4646014-4644851 (Counterclockwise)

Preceding gene: 167625735

Following gene: 167625733

Centisome position: 88.89

GC content: 48.28

Gene sequence:

>1164_bases
TTGATAAAGGCGCTCAAACGAGAGTTCACAGCTCTGCAAGATGATCCATGGCAGTTGGCGTTGATAAGCTATATTCCGCT
GCTGTGTATTATCGCTCTGTGGCTGCTGTTTAGTGCTGGCTTACCAAGACAGCTACCGGTTGCTGTGGTTGATCTGGATA
ATAGCCAAGTTAGCCGTGCTTTAGCGCGTCAATTGCAGGCCAACCCCGTGACTAAGCCGATTAGTTACACGGGTTTGCCG
AGCGCAGTCGATGCGATGAAGCAGGGGGAGGTTTATGCTCTGCTTGTGCTACCCTATGGGCTCAATCGCGATCTACTGAC
AGCCAAAACGCCAATCATCGATATTCGTTACAACAGCCAATTCCTATTAGTCGGTAAGTTATTATCGAGTCAGTTACAGC
TGAGCATGGCCGATGGTCTCAAACCGCTCGGCAAGATGAAACTGCTTGCTGCTGGTGTTCCTATAGAGAGAGTTGCAGTT
AATTTAAGCCCTGTGAGTAGCCAAACTACCGCGCTATTTAACAGTAATACTAACTACGTTGGCTTTTTAGTACCGCCGGT
GTTGATTGCACTGTTACAGCTGGTGGCCATGATGGTGTTTGCTAACAGCCTCAATCGCGAGCTACGCTGGAATACCACTG
AGCAGTGGTATGCTCTTGGGCTCTGGAAAGTGATTGCGGCTAAGGTGCTGTTCTATACACCGTTGGTATTGCTACACGGT
GGCTTTATGTTAGCGCTTATTTATCTGTATTTGGAACTGCCTATTGCTGGCAGTATTGCGGTGTTATTAATAGCCCAAAC
CCTGATGTTTCTGGCGGTTTGGCTGATGGTGCTGACCATCTTCTTCGCCCTAAAAGATAGTGCGAGAGTCATTAGCTTTT
GCACCGCGATGTTTGCCCCCGCTTTCGCCTTTATGGGCGTGACTTTCCCAGTCCATGAGATGCCAGTCCTTGCCCAGTGG
TGGCGAGTTATCATGCCTACCAGTCATTATATTGAAACCCATATTGCGGTAGTCAGTTATGGTCAAGGTTTGCTCGCAAG
CTTATCGCAAATGGCCAGTTACTGGGGATTTCTGTTGTTGCTCTTTCCAATCGCTATTTTGGCTAAAAAAGGCTTCCCTG
TGACAGAAGAGCCCGAGCTCGACACATTGGCAAAGGAGCAATAA

Upstream 100 bases:

>100_bases
AGTAGAGCTACGTCCTAACAAATCTATTGCAGATCTAAGAGTCGGCATGTCGGTACTATTCACCCTTTAAGGTGAATAGG
ACAACTAAGAGGTCAAGGAT

Downstream 100 bases:

>100_bases
TATGAGCTTCTTACAACTTATTTTCGCTGAGATAAAAGCGGTATTAGCAGATAAAACCATTGTTCTTACCGTTTTTGGTG
GCGTGCTATTTTACTCGATT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Family; Permease Component Of ABC Transporter; ABC Transporter Permease Protein; ABC-2 Type Transport System Permease Protein; Transport-Related Membrane Protein; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; ABC Transporter Transmembrane Permease; Daunorubicin Resistance Transmembrane Protein; Transmembrane Protein; Multidrug ABC Transporter Permease Component; ABC Transport System Permease Component; Conserved Transporter; Abc-2 Type Transporter; ABC Transporter Membrane Protein; ABC Transporter Permease; Multidrug ABC Transporter Permease Protein; ABC-Type Multidrug Transport System; ABC Transporter Transmembrane Protein; ABC-Type Multidrug Transporter Permease Component

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MIKALKREFTALQDDPWQLALISYIPLLCIIALWLLFSAGLPRQLPVAVVDLDNSQVSRALARQLQANPVTKPISYTGLP
SAVDAMKQGEVYALLVLPYGLNRDLLTAKTPIIDIRYNSQFLLVGKLLSSQLQLSMADGLKPLGKMKLLAAGVPIERVAV
NLSPVSSQTTALFNSNTNYVGFLVPPVLIALLQLVAMMVFANSLNRELRWNTTEQWYALGLWKVIAAKVLFYTPLVLLHG
GFMLALIYLYLELPIAGSIAVLLIAQTLMFLAVWLMVLTIFFALKDSARVISFCTAMFAPAFAFMGVTFPVHEMPVLAQW
WRVIMPTSHYIETHIAVVSYGQGLLASLSQMASYWGFLLLLFPIAILAKKGFPVTEEPELDTLAKEQ

Sequences:

>Translated_387_residues
MIKALKREFTALQDDPWQLALISYIPLLCIIALWLLFSAGLPRQLPVAVVDLDNSQVSRALARQLQANPVTKPISYTGLP
SAVDAMKQGEVYALLVLPYGLNRDLLTAKTPIIDIRYNSQFLLVGKLLSSQLQLSMADGLKPLGKMKLLAAGVPIERVAV
NLSPVSSQTTALFNSNTNYVGFLVPPVLIALLQLVAMMVFANSLNRELRWNTTEQWYALGLWKVIAAKVLFYTPLVLLHG
GFMLALIYLYLELPIAGSIAVLLIAQTLMFLAVWLMVLTIFFALKDSARVISFCTAMFAPAFAFMGVTFPVHEMPVLAQW
WRVIMPTSHYIETHIAVVSYGQGLLASLSQMASYWGFLLLLFPIAILAKKGFPVTEEPELDTLAKEQ
>Mature_387_residues
MIKALKREFTALQDDPWQLALISYIPLLCIIALWLLFSAGLPRQLPVAVVDLDNSQVSRALARQLQANPVTKPISYTGLP
SAVDAMKQGEVYALLVLPYGLNRDLLTAKTPIIDIRYNSQFLLVGKLLSSQLQLSMADGLKPLGKMKLLAAGVPIERVAV
NLSPVSSQTTALFNSNTNYVGFLVPPVLIALLQLVAMMVFANSLNRELRWNTTEQWYALGLWKVIAAKVLFYTPLVLLHG
GFMLALIYLYLELPIAGSIAVLLIAQTLMFLAVWLMVLTIFFALKDSARVISFCTAMFAPAFAFMGVTFPVHEMPVLAQW
WRVIMPTSHYIETHIAVVSYGQGLLASLSQMASYWGFLLLLFPIAILAKKGFPVTEEPELDTLAKEQ

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42859; Mature: 42859

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKALKREFTALQDDPWQLALISYIPLLCIIALWLLFSAGLPRQLPVAVVDLDNSQVSRA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH
LARQLQANPVTKPISYTGLPSAVDAMKQGEVYALLVLPYGLNRDLLTAKTPIIDIRYNSQ
HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCEECCCCEEEEEECCC
FLLVGKLLSSQLQLSMADGLKPLGKMKLLAAGVPIERVAVNLSPVSSQTTALFNSNTNYV
EEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEECCCCCCCHHEEECCCCCEE
GFLVPPVLIALLQLVAMMVFANSLNRELRWNTTEQWYALGLWKVIAAKVLFYTPLVLLHG
EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFMLALIYLYLELPIAGSIAVLLIAQTLMFLAVWLMVLTIFFALKDSARVISFCTAMFAP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AFAFMGVTFPVHEMPVLAQWWRVIMPTSHYIETHIAVVSYGQGLLASLSQMASYWGFLLL
HHHHHCCCCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LFPIAILAKKGFPVTEEPELDTLAKEQ
HHHHHHHHHCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MIKALKREFTALQDDPWQLALISYIPLLCIIALWLLFSAGLPRQLPVAVVDLDNSQVSRA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHH
LARQLQANPVTKPISYTGLPSAVDAMKQGEVYALLVLPYGLNRDLLTAKTPIIDIRYNSQ
HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCEECCCCEEEEEECCC
FLLVGKLLSSQLQLSMADGLKPLGKMKLLAAGVPIERVAVNLSPVSSQTTALFNSNTNYV
EEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEECCCCCCCHHEEECCCCCEE
GFLVPPVLIALLQLVAMMVFANSLNRELRWNTTEQWYALGLWKVIAAKVLFYTPLVLLHG
EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFMLALIYLYLELPIAGSIAVLLIAQTLMFLAVWLMVLTIFFALKDSARVISFCTAMFAP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AFAFMGVTFPVHEMPVLAQWWRVIMPTSHYIETHIAVVSYGQGLLASLSQMASYWGFLLL
HHHHHCCCCCHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LFPIAILAKKGFPVTEEPELDTLAKEQ
HHHHHHHHHCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA