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The map label for this gene is yicO [H]

Identifier: 167625083

GI number: 167625083

Start: 3872971

End: 3874260

Strand: Reverse

Name: yicO [H]

Synonym: Shal_3171

Alternate gene names: 167625083

Gene position: 3874260-3872971 (Counterclockwise)

Preceding gene: 167625084

Following gene: 167625082

Centisome position: 74.12

GC content: 46.9

Gene sequence:

>1290_bases
ATGTTAGAAAAACTATTCAAATTAAAACAAAATCAAACAACGCTAAAGCAAGAGGTTGTGGCGGGTTTAACCACATTCTT
GACCATGGCTTATATTATTTTCGTTAACCCTATGATGCTGGCCGATGCCGGTATGGATCATGGCGCCGTGTTTGTCGCCA
CCTGTTTAGCAGCAGCAATTGGTTGCTTAGTGATGGGCTTAGTGGCTAATTACCCCATTGCACTTGCGCCAGGTATGGGA
TTAAACGCCTTCTTTACCTATACGGTAGTCGGCGAGATGGGTTATTCATGGGAGACGGCCTTAGGTGCGGTGTTCCTGTC
GGGGATCTGTTTCTTGGTGCTGTCTTTAGTGCGTATTCGTGAATGGATAGTTAATAGTATTCCTATGTCACTGCGGATCG
GTATTGCTGCTGGCATCGGTCTTTTCTTGGCTTTGATAGGGCTTAAGAGTGCGGGGATTGTGGTTGCCAGCCCTGCAACA
CTCGTGACTATGGGGGATATAACTGCGTTTCCTGCGGTTATGGCTGTTTTGGGCTTTTTCTTGATTATCGCCATGGTACA
CCGAGGTATGAAGTCAGCAGTCATTGTTAGCATTCTTGCTGTTACTGCATTAGGGCTATTATTTGGTGACGTGCAGTATC
AAGGTGTGGTTTCAATGCCTCCTTCAATCGCACCGACTTTTATGAAGATGGATCTTTCTGGCGTGCTTGAAATTAGTATG
TTGTCGGTGGTATTTGCCTTTTTATTTGTCGATCTATTCGACACCTCTGGCACCTTAGTGGCAGTGGCTCAGCGTGGTGG
TTTTTTAGATGATAAAGGCCGTTTGCCAAGGCTTAATCGTGCATTAACCGCTGACAGCACTGCAACCATTGCCGGCGCCA
TGCTGGGAACCTCAACCACGACTAGCTATATCGAGAGTACCGCAGGTGTGAGTGCGGGCGGGCGCACTGGATTAACTGCC
GTTGTGGTTGGTTTGCTATTTCTCGGTTCGCTATTTATTTCGCCTTTAGCGGCAATGGTGCCTGCGTATGCAACGGCGGG
GACGCTATTTTACGTGGCGATCTTAATGATGTCAGGCCTAGTTCATGTTGAGTGGGAAGATATTACCGAAGCGGCACCCG
TTGTTGTGGTATGTATCTTAATGCCGCTAACATTCTCTATTGCCACAGGCATTGCGATGGGTTTTATCTCTTATGCTGTA
ATCAAGTTGATGAGTGGCCGCTATAAAGACTTAAGCTTTGGCGTGGTGATATTAGCGGCTCTGTTCATTGCTAAGTTTAT
TTATGGCTAG

Upstream 100 bases:

>100_bases
AATCAAATGATGATTGTTTGCTAAATAGAAAAGTCTTACTTAAGTTACCAATGGTTACACCCTACAAATCAATATAATAA
AAACCAAGGGACTGAGTTCC

Downstream 100 bases:

>100_bases
CACGTTCTGTGAGTGTGAATGGCGCGTTCAATAAATGCGAGTTGCACAATAGAAAAGCTGCACACAATGTGGCTTTTCTA
TTTATGGCGATTTAGAACCG

Product: xanthine/uracil/vitamin C permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLEKLFKLKQNQTTLKQEVVAGLTTFLTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLVANYPIALAPGMG
LNAFFTYTVVGEMGYSWETALGAVFLSGICFLVLSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT
LVTMGDITAFPAVMAVLGFFLIIAMVHRGMKSAVIVSILAVTALGLLFGDVQYQGVVSMPPSIAPTFMKMDLSGVLEISM
LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDDKGRLPRLNRALTADSTATIAGAMLGTSTTTSYIESTAGVSAGGRTGLTA
VVVGLLFLGSLFISPLAAMVPAYATAGTLFYVAILMMSGLVHVEWEDITEAAPVVVVCILMPLTFSIATGIAMGFISYAV
IKLMSGRYKDLSFGVVILAALFIAKFIYG

Sequences:

>Translated_429_residues
MLEKLFKLKQNQTTLKQEVVAGLTTFLTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLVANYPIALAPGMG
LNAFFTYTVVGEMGYSWETALGAVFLSGICFLVLSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT
LVTMGDITAFPAVMAVLGFFLIIAMVHRGMKSAVIVSILAVTALGLLFGDVQYQGVVSMPPSIAPTFMKMDLSGVLEISM
LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDDKGRLPRLNRALTADSTATIAGAMLGTSTTTSYIESTAGVSAGGRTGLTA
VVVGLLFLGSLFISPLAAMVPAYATAGTLFYVAILMMSGLVHVEWEDITEAAPVVVVCILMPLTFSIATGIAMGFISYAV
IKLMSGRYKDLSFGVVILAALFIAKFIYG
>Mature_429_residues
MLEKLFKLKQNQTTLKQEVVAGLTTFLTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAIGCLVMGLVANYPIALAPGMG
LNAFFTYTVVGEMGYSWETALGAVFLSGICFLVLSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT
LVTMGDITAFPAVMAVLGFFLIIAMVHRGMKSAVIVSILAVTALGLLFGDVQYQGVVSMPPSIAPTFMKMDLSGVLEISM
LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDDKGRLPRLNRALTADSTATIAGAMLGTSTTTSYIESTAGVSAGGRTGLTA
VVVGLLFLGSLFISPLAAMVPAYATAGTLFYVAILMMSGLVHVEWEDITEAAPVVVVCILMPLTFSIATGIAMGFISYAV
IKLMSGRYKDLSFGVVILAALFIAKFIYG

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=426, Percent_Identity=51.6431924882629, Blast_Score=467, Evalue=1e-133,
Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=52.3364485981308, Blast_Score=459, Evalue=1e-130,
Organism=Escherichia coli, GI1790499, Length=425, Percent_Identity=39.7647058823529, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI48994909, Length=435, Percent_Identity=38.8505747126437, Blast_Score=272, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 45014; Mature: 45014

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCC
>Mature Secondary Structure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HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]