Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624606

Identifier: 167624606

GI number: 167624606

Start: 3261095

End: 3261901

Strand: Reverse

Name: 167624606

Synonym: Shal_2688

Alternate gene names: NA

Gene position: 3261901-3261095 (Counterclockwise)

Preceding gene: 167624607

Following gene: 167624589

Centisome position: 62.41

GC content: 45.11

Gene sequence:

>807_bases
ATGGCCCGTTTGCGTTACCTTTCCATTTCACCTCTCTTGTTTATATTGCCTGCTCATTCTGAGACCGATTACAGCCATTA
CGCATTTGCTAATTATTTGGGTAGCGGACTCTATCGCACGGCTGGTCAAAACGCGACGGTCGCCAATATTCCCATTAGTT
TCGACTTGCAGCGCAGTGAAACAGAATCATTAGTCCTGAAAACACCGGTATCCATGGGTTTTTTCAACTTTACTTGGCGT
GATTTACCCGAAGGTGAATTTCCCTCGAGTGTCGGAACCTTAACGGTAACTCCTGGATTGGAGTATCGAATCAAAACCTC
AGATACCCATGAATTCCAAACGTATGCCGATCTTGGTTTTGGCACCAACTTTACCAATAGTAACGATGTGATTATCTATT
CAGCTGGGATGTCGAGCCTGCTTGATTTTGAGTTGGGCGATTCTGATCCTGTATGGGTGAACCGTATATTTTTTGCCGGT
TATAGCACCTTACATGATGGTTCGAGCGAGACATATTCCGCAGTGCAATCCGGTGTCGATATCGGTACCAATCTTCATTT
TCAGCTTGGGGGAGTCGATATGGAACCTCGATTTTTCGCCGCAGGCTATTGGTATTTCGATCGCTTAAAGTTCACTACGC
CATTTGAAGAGGACGTGCTGGTGGCGAATAGTTTTGAAGCTGGGATCACCTTGGCTTTTTCAAAGCCGATAGGTTGGGAC
TTAGTTAATATTGATCGCTTTGGGATTAGTTACCGGGCGGGTGATGGTGTTGAGGTTTGGCGTTTAATTTTTGAGTTTCC
TCTCTAA

Upstream 100 bases:

>100_bases
AATCCCTTTCGGTAAAAGTGTTAGTTTTCATGGATTTTACCCTGCAATACCGCTATATTCGGGCTATCGATTAGAGTTTA
ATTAAGTTTAAAGTCAATTT

Downstream 100 bases:

>100_bases
AAATCATCGTAAATCATTGGCTTAATCAGATCGACGATTAAACCAACGTATTTAGTCTCTTGCTTAATGGGATTATTTTC
CCCAAATTTTCGCATTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MARLRYLSISPLLFILPAHSETDYSHYAFANYLGSGLYRTAGQNATVANIPISFDLQRSETESLVLKTPVSMGFFNFTWR
DLPEGEFPSSVGTLTVTPGLEYRIKTSDTHEFQTYADLGFGTNFTNSNDVIIYSAGMSSLLDFELGDSDPVWVNRIFFAG
YSTLHDGSSETYSAVQSGVDIGTNLHFQLGGVDMEPRFFAAGYWYFDRLKFTTPFEEDVLVANSFEAGITLAFSKPIGWD
LVNIDRFGISYRAGDGVEVWRLIFEFPL

Sequences:

>Translated_268_residues
MARLRYLSISPLLFILPAHSETDYSHYAFANYLGSGLYRTAGQNATVANIPISFDLQRSETESLVLKTPVSMGFFNFTWR
DLPEGEFPSSVGTLTVTPGLEYRIKTSDTHEFQTYADLGFGTNFTNSNDVIIYSAGMSSLLDFELGDSDPVWVNRIFFAG
YSTLHDGSSETYSAVQSGVDIGTNLHFQLGGVDMEPRFFAAGYWYFDRLKFTTPFEEDVLVANSFEAGITLAFSKPIGWD
LVNIDRFGISYRAGDGVEVWRLIFEFPL
>Mature_267_residues
ARLRYLSISPLLFILPAHSETDYSHYAFANYLGSGLYRTAGQNATVANIPISFDLQRSETESLVLKTPVSMGFFNFTWRD
LPEGEFPSSVGTLTVTPGLEYRIKTSDTHEFQTYADLGFGTNFTNSNDVIIYSAGMSSLLDFELGDSDPVWVNRIFFAGY
STLHDGSSETYSAVQSGVDIGTNLHFQLGGVDMEPRFFAAGYWYFDRLKFTTPFEEDVLVANSFEAGITLAFSKPIGWDL
VNIDRFGISYRAGDGVEVWRLIFEFPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29987; Mature: 29856

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLRYLSISPLLFILPAHSETDYSHYAFANYLGSGLYRTAGQNATVANIPISFDLQRSE
CCEEEEEEECCEEEEEECCCCCCCCHHHHHHHHCCCCEECCCCCCEEEECCEEEEECCCC
TESLVLKTPVSMGFFNFTWRDLPEGEFPSSVGTLTVTPGLEYRIKTSDTHEFQTYADLGF
CCEEEEECCCCCCEEECEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEEECCC
GTNFTNSNDVIIYSAGMSSLLDFELGDSDPVWVNRIFFAGYSTLHDGSSETYSAVQSGVD
CCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCEECCCCCHHHHHHHCCCC
IGTNLHFQLGGVDMEPRFFAAGYWYFDRLKFTTPFEEDVLVANSFEAGITLAFSKPIGWD
CCCEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCE
LVNIDRFGISYRAGDGVEVWRLIFEFPL
EEEEEECCEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ARLRYLSISPLLFILPAHSETDYSHYAFANYLGSGLYRTAGQNATVANIPISFDLQRSE
CEEEEEEECCEEEEEECCCCCCCCHHHHHHHHCCCCEECCCCCCEEEECCEEEEECCCC
TESLVLKTPVSMGFFNFTWRDLPEGEFPSSVGTLTVTPGLEYRIKTSDTHEFQTYADLGF
CCEEEEECCCCCCEEECEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCEEEEEECCC
GTNFTNSNDVIIYSAGMSSLLDFELGDSDPVWVNRIFFAGYSTLHDGSSETYSAVQSGVD
CCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCEECCCCCHHHHHHHCCCC
IGTNLHFQLGGVDMEPRFFAAGYWYFDRLKFTTPFEEDVLVANSFEAGITLAFSKPIGWD
CCCEEEEEECCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCE
LVNIDRFGISYRAGDGVEVWRLIFEFPL
EEEEEECCEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA