| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is pabB [H]
Identifier: 167624181
GI number: 167624181
Start: 2738607
End: 2740244
Strand: Direct
Name: pabB [H]
Synonym: Shal_2257
Alternate gene names: 167624181
Gene position: 2738607-2740244 (Clockwise)
Preceding gene: 167624178
Following gene: 167624182
Centisome position: 52.39
GC content: 44.51
Gene sequence:
>1638_bases ATGAACAAATTGACGCAAAATGCAGTTTTTACAAAGCGTCTTGATTGGAATTTAAGCACAACAGAATTATTTGAGCATTT TTCAGCCTTGCCTTGGTCAGTTTTGCTCGATTCTGCCAATGCTGCTCACATAGATGCTAAATTCGATGTGATCTGTGCCG AGCCTGTAGCCACTATAGTAAACCATGGCCAATCAACCACTATTACACGCTCAACTGACAGACAACCGCTATTTAGGTTC GATCAACAACCAGCTGACAACGACTTAGATAACCCAAAAAATGAGTACGCAGAAAAAGCCGCTAAACATTCGGTATCGAG TCGCGATCCTTTTGATCTCTTAAATGAGTTGTTGGCAGAGTACTACCCAACACAGAAATACAGCCCCTTCATCTTTAGTG GCGGCGTTATGGGAAGTTTTAGCTACGATATTGGCCGAGTCATTGAAAAGCTCCCCCAAATTGCGGCTAACGATATTTCG CTGCCTGAGATGAACCTTGCTTGTTACGACTGGGCGCTAATTTTTGACTATAAAACCCAAAGCTGGCAACTGGTTCACTA TCAATCACAACAAGCTTTGGAGGCTCTTGAGCTGAGGCTAAATCAGCTTATCGAGCCTAGCCTGTTGGTTAAAGTCAATT CGACGCTTGAAAGCTCCCTGAACGTAGAGAACTCTCTGAACTTAGAAAACACTCAGAAGTTAAATACCTCTAAAAATTCA GAAACAGACCAACAAGATAACCCTATAGCGAATAGTGCTTTTAGGCTTAACGGTCAATGGCGTAATCAGCTTTCTGAACA GGCTTATAAAGACAAGTTTGAACAGGTACAAGCATATCTGCTCAGTGGCGATTGTTATCAAATTAACCTAACTCAACGGT TTAGTGCCTCGTATACGGGTAACGAATGGCAAGCTTATAAAGCATTGCGAGAGAGTAATGGTGCACCATTTTCAGCGTTT ATCCGCTTAGAGGGCCATGCGCTACTCTCCATCTCGCCAGAGCGTTTTATCCAGCATAAAAATGGCGACATTCAAACTAA GCCGATTAAAGGCACTATGCCAAGAGGTGTTGACCCACATAGTGATAGTGAACTTGCCGCTCAACTAAAGGCTTCAGAGA AAGATCGGGCTGAGAATGTCATGATTGTCGACCTGCTACGAAACGATATAGGTAAAGTAGCACTGCCTGGCAGTGTTGCG GTCCCTCACCTATTTGAGGTTGAAAGCTTTCCTGCGGTGCACCATCTGGTCAGCACGGTTACCGCGAAACTTAAACCAGA GCTAAACCCTACAGATCTATTGAGAGCATGTTTCCCCGGGGGCTCAATAACAGGCGCGCCAAAAATTCGAGCGATGTCGA TTATTGAAGAGCTTGAACCCTCTAGAAGAAGCCTCTATTGTGGCTCTATAGGCTATATAAGCCAAGACGGTACTATGGAT ACCAGCATTACTATCCGCACGTTAGTAGCCCAAAGAGACGAAACCAGTCATCTAGCTCCCCTTAACGGAAGGCAAGGCAT CATACATTGCTGGGCTGGAGGCGGTATCGTCGCCGATTCTAAGGTCGATGCTGAGTATCAGGAGAGTTTTGATAAAATCA GTCGTATATTGCCCGTTCTTTCTAACCTAAACCGTTAA
Upstream 100 bases:
>100_bases CCATTAAAGCTCACGTGTTTTGTTTTTATTACTTGTGTAAGCAATATGATACTCTTTCGCGAGTTTGAGTTAAACATCAC ATTTTAGATAGGGTTAACAG
Downstream 100 bases:
>100_bases TAAGTCGTATATCAACCAGCCCTATACGGGGTTAATAGCAAAGGATAAGTTATGGATCTGGCGGAGTTTAGACTCAGGTA TACTCTTAATGCTCTGCCAG
Product: para-aminobenzoate synthase subunit I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MNKLTQNAVFTKRLDWNLSTTELFEHFSALPWSVLLDSANAAHIDAKFDVICAEPVATIVNHGQSTTITRSTDRQPLFRF DQQPADNDLDNPKNEYAEKAAKHSVSSRDPFDLLNELLAEYYPTQKYSPFIFSGGVMGSFSYDIGRVIEKLPQIAANDIS LPEMNLACYDWALIFDYKTQSWQLVHYQSQQALEALELRLNQLIEPSLLVKVNSTLESSLNVENSLNLENTQKLNTSKNS ETDQQDNPIANSAFRLNGQWRNQLSEQAYKDKFEQVQAYLLSGDCYQINLTQRFSASYTGNEWQAYKALRESNGAPFSAF IRLEGHALLSISPERFIQHKNGDIQTKPIKGTMPRGVDPHSDSELAAQLKASEKDRAENVMIVDLLRNDIGKVALPGSVA VPHLFEVESFPAVHHLVSTVTAKLKPELNPTDLLRACFPGGSITGAPKIRAMSIIEELEPSRRSLYCGSIGYISQDGTMD TSITIRTLVAQRDETSHLAPLNGRQGIIHCWAGGGIVADSKVDAEYQESFDKISRILPVLSNLNR
Sequences:
>Translated_545_residues MNKLTQNAVFTKRLDWNLSTTELFEHFSALPWSVLLDSANAAHIDAKFDVICAEPVATIVNHGQSTTITRSTDRQPLFRF DQQPADNDLDNPKNEYAEKAAKHSVSSRDPFDLLNELLAEYYPTQKYSPFIFSGGVMGSFSYDIGRVIEKLPQIAANDIS LPEMNLACYDWALIFDYKTQSWQLVHYQSQQALEALELRLNQLIEPSLLVKVNSTLESSLNVENSLNLENTQKLNTSKNS ETDQQDNPIANSAFRLNGQWRNQLSEQAYKDKFEQVQAYLLSGDCYQINLTQRFSASYTGNEWQAYKALRESNGAPFSAF IRLEGHALLSISPERFIQHKNGDIQTKPIKGTMPRGVDPHSDSELAAQLKASEKDRAENVMIVDLLRNDIGKVALPGSVA VPHLFEVESFPAVHHLVSTVTAKLKPELNPTDLLRACFPGGSITGAPKIRAMSIIEELEPSRRSLYCGSIGYISQDGTMD TSITIRTLVAQRDETSHLAPLNGRQGIIHCWAGGGIVADSKVDAEYQESFDKISRILPVLSNLNR >Mature_545_residues MNKLTQNAVFTKRLDWNLSTTELFEHFSALPWSVLLDSANAAHIDAKFDVICAEPVATIVNHGQSTTITRSTDRQPLFRF DQQPADNDLDNPKNEYAEKAAKHSVSSRDPFDLLNELLAEYYPTQKYSPFIFSGGVMGSFSYDIGRVIEKLPQIAANDIS LPEMNLACYDWALIFDYKTQSWQLVHYQSQQALEALELRLNQLIEPSLLVKVNSTLESSLNVENSLNLENTQKLNTSKNS ETDQQDNPIANSAFRLNGQWRNQLSEQAYKDKFEQVQAYLLSGDCYQINLTQRFSASYTGNEWQAYKALRESNGAPFSAF IRLEGHALLSISPERFIQHKNGDIQTKPIKGTMPRGVDPHSDSELAAQLKASEKDRAENVMIVDLLRNDIGKVALPGSVA VPHLFEVESFPAVHHLVSTVTAKLKPELNPTDLLRACFPGGSITGAPKIRAMSIIEELEPSRRSLYCGSIGYISQDGTMD TSITIRTLVAQRDETSHLAPLNGRQGIIHCWAGGGIVADSKVDAEYQESFDKISRILPVLSNLNR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=536, Percent_Identity=46.0820895522388, Blast_Score=442, Evalue=1e-125, Organism=Escherichia coli, GI1787518, Length=458, Percent_Identity=28.6026200873362, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI1786809, Length=221, Percent_Identity=28.9592760180996, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI87082077, Length=232, Percent_Identity=23.7068965517241, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320935, Length=472, Percent_Identity=29.2372881355932, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6324361, Length=300, Percent_Identity=29, Blast_Score=120, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 60854; Mature: 60854
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLTQNAVFTKRLDWNLSTTELFEHFSALPWSVLLDSANAAHIDAKFDVICAEPVATIV CCCCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHEECCCCCEEECCEEEEEECCHHHHHH NHGQSTTITRSTDRQPLFRFDQQPADNDLDNPKNEYAEKAAKHSVSSRDPFDLLNELLAE HCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH YYPTQKYSPFIFSGGVMGSFSYDIGRVIEKLPQIAANDISLPEMNLACYDWALIFDYKTQ HCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCC SWQLVHYQSQQALEALELRLNQLIEPSLLVKVNSTLESSLNVENSLNLENTQKLNTSKNS CEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCCCCCCCHHCCCCCCC ETDQQDNPIANSAFRLNGQWRNQLSEQAYKDKFEQVQAYLLSGDCYQINLTQRFSASYTG CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCC NEWQAYKALRESNGAPFSAFIRLEGHALLSISPERFIQHKNGDIQTKPIKGTMPRGVDPH CHHHHHHHHHHCCCCCEEEEEEEECCEEEEECHHHHHHCCCCCEEECCCCCCCCCCCCCC SDSELAAQLKASEKDRAENVMIVDLLRNDIGKVALPGSVAVPHLFEVESFPAVHHLVSTV CCHHHHHHHHCCCHHHHCCEEEHHHHHHCCCCEECCCCCCCCCEEECCCCHHHHHHHHHH TAKLKPELNPTDLLRACFPGGSITGAPKIRAMSIIEELEPSRRSLYCGSIGYISQDGTMD HHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHEEEECCCCEECCCCCCC TSITIRTLVAQRDETSHLAPLNGRQGIIHCWAGGGIVADSKVDAEYQESFDKISRILPVL CCEEEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHH SNLNR HCCCC >Mature Secondary Structure MNKLTQNAVFTKRLDWNLSTTELFEHFSALPWSVLLDSANAAHIDAKFDVICAEPVATIV CCCCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHEECCCCCEEECCEEEEEECCHHHHHH NHGQSTTITRSTDRQPLFRFDQQPADNDLDNPKNEYAEKAAKHSVSSRDPFDLLNELLAE HCCCCCEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH YYPTQKYSPFIFSGGVMGSFSYDIGRVIEKLPQIAANDISLPEMNLACYDWALIFDYKTQ HCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCC SWQLVHYQSQQALEALELRLNQLIEPSLLVKVNSTLESSLNVENSLNLENTQKLNTSKNS CEEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCCCCCCCCHHCCCCCCC ETDQQDNPIANSAFRLNGQWRNQLSEQAYKDKFEQVQAYLLSGDCYQINLTQRFSASYTG CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCC NEWQAYKALRESNGAPFSAFIRLEGHALLSISPERFIQHKNGDIQTKPIKGTMPRGVDPH CHHHHHHHHHHCCCCCEEEEEEEECCEEEEECHHHHHHCCCCCEEECCCCCCCCCCCCCC SDSELAAQLKASEKDRAENVMIVDLLRNDIGKVALPGSVAVPHLFEVESFPAVHHLVSTV CCHHHHHHHHCCCHHHHCCEEEHHHHHHCCCCEECCCCCCCCCEEECCCCHHHHHHHHHH TAKLKPELNPTDLLRACFPGGSITGAPKIRAMSIIEELEPSRRSLYCGSIGYISQDGTMD HHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHEEEECCCCEECCCCCCC TSITIRTLVAQRDETSHLAPLNGRQGIIHCWAGGGIVADSKVDAEYQESFDKISRILPVL CCEEEEEHHHCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHH SNLNR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]