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The map label for this gene is 167624178

Identifier: 167624178

GI number: 167624178

Start: 2733919

End: 2734500

Strand: Direct

Name: 167624178

Synonym: Shal_2254

Alternate gene names: NA

Gene position: 2733919-2734500 (Clockwise)

Preceding gene: 167624177

Following gene: 167624181

Centisome position: 52.3

GC content: 43.13

Gene sequence:

>582_bases
ATGCTACTGACACGAAAACATATCTTTCCCAAAAAGTCTTCCGGTTTTACCTTAATAGAATTAGTCGTCGTCATCGTTAT
TTTGGGTATTATTGCCGTTGTTGCCGCAAGCAAATTTGTTAACTTTAACCGTGATGCTCAAGTGGCACAGCTAGATAATC
TTGCTACCGATCTGAGCGGTCAAAATCAATTGGTTTATAGTAAAAGCGCTATAGATAATATTGAACAACTTAAGGGTTGT
ACTTACCAATGTGGCGGTCATGAAAACTGGGACGTATTGGTGGGGGAATATTTTGTCGATGTCTCTGGCACTCGGCTCTA
TGTCAGTTTGGGCTATCCTTTACCACCATTGTCCTCTAGCGACGTCGTGAACCAAAACTACCGCAGCGCCTTTGGCTTGC
CTGAATCGGAGTTTGTTTTCACCAGTGTACCAAGACACGTATCGGCAACGGCTATCGTTCCCATCAAGTGGCAAGATAAA
CTCACTGATATTAACACTGGCAAATTTGAATGCCATGTAGAATATAGCTCGCCAACCGCCATACGGGACTATAGCGTTCG
AGTTTATGATAAAGACTGCTAG

Upstream 100 bases:

>100_bases
AACACTTCAGCAATCTTGTATCACAATGTATCACCAATGCCTTGTTAGGCACTGGATTGATCGATAACCTTTCGCGCTTT
GTAAATAAAGAGCCAAAGTA

Downstream 100 bases:

>100_bases
ATAACGTTAGAGACAGCTAGAAGCGCTCGTGAGCTAGATAAAATGACTGTTTAGCTAACTCACCCTTTATCGTCCGTTAC
CTGTCTTTGAGAATATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: MSHA Pilin Protein MshA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLLTRKHIFPKKSSGFTLIELVVVIVILGIIAVVAASKFVNFNRDAQVAQLDNLATDLSGQNQLVYSKSAIDNIEQLKGC
TYQCGGHENWDVLVGEYFVDVSGTRLYVSLGYPLPPLSSSDVVNQNYRSAFGLPESEFVFTSVPRHVSATAIVPIKWQDK
LTDINTGKFECHVEYSSPTAIRDYSVRVYDKDC

Sequences:

>Translated_193_residues
MLLTRKHIFPKKSSGFTLIELVVVIVILGIIAVVAASKFVNFNRDAQVAQLDNLATDLSGQNQLVYSKSAIDNIEQLKGC
TYQCGGHENWDVLVGEYFVDVSGTRLYVSLGYPLPPLSSSDVVNQNYRSAFGLPESEFVFTSVPRHVSATAIVPIKWQDK
LTDINTGKFECHVEYSSPTAIRDYSVRVYDKDC
>Mature_193_residues
MLLTRKHIFPKKSSGFTLIELVVVIVILGIIAVVAASKFVNFNRDAQVAQLDNLATDLSGQNQLVYSKSAIDNIEQLKGC
TYQCGGHENWDVLVGEYFVDVSGTRLYVSLGYPLPPLSSSDVVNQNYRSAFGLPESEFVFTSVPRHVSATAIVPIKWQDK
LTDINTGKFECHVEYSSPTAIRDYSVRVYDKDC

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21444; Mature: 21444

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTRKHIFPKKSSGFTLIELVVVIVILGIIAVVAASKFVNFNRDAQVAQLDNLATDLSG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
QNQLVYSKSAIDNIEQLKGCTYQCGGHENWDVLVGEYFVDVSGTRLYVSLGYPLPPLSSS
CCEEEEEHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCC
DVVNQNYRSAFGLPESEFVFTSVPRHVSATAIVPIKWQDKLTDINTGKFECHVEYSSPTA
CCCCCCHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCE
IRDYSVRVYDKDC
EEEEEEEEEECCC
>Mature Secondary Structure
MLLTRKHIFPKKSSGFTLIELVVVIVILGIIAVVAASKFVNFNRDAQVAQLDNLATDLSG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
QNQLVYSKSAIDNIEQLKGCTYQCGGHENWDVLVGEYFVDVSGTRLYVSLGYPLPPLSSS
CCEEEEEHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCC
DVVNQNYRSAFGLPESEFVFTSVPRHVSATAIVPIKWQDKLTDINTGKFECHVEYSSPTA
CCCCCCHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCE
IRDYSVRVYDKDC
EEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA