Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624168

Identifier: 167624168

GI number: 167624168

Start: 2719062

End: 2720255

Strand: Direct

Name: 167624168

Synonym: Shal_2244

Alternate gene names: NA

Gene position: 2719062-2720255 (Clockwise)

Preceding gene: 167624167

Following gene: 167624169

Centisome position: 52.02

GC content: 42.46

Gene sequence:

>1194_bases
ATGACAAGTCAAAATAGCCCAGAACGTTGGGATATCTTTTGTGCCGTTGTTGATAATTATGGTGACATTGGCGTCACATG
GCGACTTGCAAAGCAACTGTCTGCAGAGCAACCTATTGCTATCACCTTATGGGTCGATGATTTAAAAAGCTTCTCACACA
TATTACCCGCATTAGATCCTGAGCTGGTTAGCCAAGTGCACTTTGGAGTCACCATCAATCAGTGGTCTACTCCGTTAGCT
ATCGCGTATCAAACTGGTAATGTGCTTATCGAGGCCTTTGCATGTGAATTGCCCGAGCAAGTCAAAACCAGCTTAATTGC
AATGCAACAAGCATCCAAGCTCGACTCAAGCGCAGCGAAGCCGCCTTTATGGCTCAACCTTGAATATCTCAGTGCCGAAT
CTTGGGTAGAAGGGTGCCATGGCTTACCCTCTATGCAAGCTAGCGGTTTAAAGAAGTATTTTTACTTTCCTGGGTTCACC
GCTAAAACGGGTGGGCTTATTTGTGAAAACAAGCTGTTTGAAAAGCGCGATGCTTGGCAATTAAATCTGCAAAATCGACA
GGATCTGTTTGCAAGTCTCGGGCTCAGTGGCATAGAGCCGATTGATAAAGTTGTTAGCGTTTTTAGCTATGAGACGAAGG
CGTTACTCGCTCTGTGTGAAACATGGCAAGATAGTGAACAAACTATTCATGCGTTGTTCCCTAAAGGGCGTAGCCTTAAC
AGCTTGCAATCGATTCTCCCCTGCTCTATTGAAGAACTCAGTGCAGGAATGCAGATTAAGCTTGGTAATTTGGTCATTCA
TATTTTGCCAATGACAGATCAAGAAGGTTACGATAAGTTACTTTGGAGCTGTGATTTTAATATTGTGCGCGGTGAGGATT
CATTTTTAAGAGCCCAATGGGCCGCAAAACCCTTCATTTGGCACATATATGCACAAGAAGATGACTATCATCTAATAAAA
TTAGATGCCTTTATGCAGCTTTACTGTAATAATCTGCCGCCAGAATTAGCTAAAAGCTGGAAAGTGTTAAATCTTGCCTT
CAATAATGAACAGCAAGAACTGACAGCTAGCCACTGGCAAAAAATAAATTTAGTCGATTTGCCGCTATTGCAACACGCAA
AACAATGGCCAATCGATGCAATCAATGATGTAGATCTTGTTTCTCGACTAGTTCAATTCGTCAAAAATAGCTAA

Upstream 100 bases:

>100_bases
CGGCATATTATTATGCCGCTTTTTTGTCTCTATGAATATTGGCTATTCAATAACCTATTTAACCAACTCCTAATGAGCTG
ATACTGTGAGTGTTTGTAAT

Downstream 100 bases:

>100_bases
GATACTACGTTTAAATAGAAAAACCTAAAATAGGAAATAGTGTAATGAAAACTGCTCATGAACTCCGTCCTGGTAACGTG
ATCATGTTAGATGGCAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTSQNSPERWDIFCAVVDNYGDIGVTWRLAKQLSAEQPIAITLWVDDLKSFSHILPALDPELVSQVHFGVTINQWSTPLA
IAYQTGNVLIEAFACELPEQVKTSLIAMQQASKLDSSAAKPPLWLNLEYLSAESWVEGCHGLPSMQASGLKKYFYFPGFT
AKTGGLICENKLFEKRDAWQLNLQNRQDLFASLGLSGIEPIDKVVSVFSYETKALLALCETWQDSEQTIHALFPKGRSLN
SLQSILPCSIEELSAGMQIKLGNLVIHILPMTDQEGYDKLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYAQEDDYHLIK
LDAFMQLYCNNLPPELAKSWKVLNLAFNNEQQELTASHWQKINLVDLPLLQHAKQWPIDAINDVDLVSRLVQFVKNS

Sequences:

>Translated_397_residues
MTSQNSPERWDIFCAVVDNYGDIGVTWRLAKQLSAEQPIAITLWVDDLKSFSHILPALDPELVSQVHFGVTINQWSTPLA
IAYQTGNVLIEAFACELPEQVKTSLIAMQQASKLDSSAAKPPLWLNLEYLSAESWVEGCHGLPSMQASGLKKYFYFPGFT
AKTGGLICENKLFEKRDAWQLNLQNRQDLFASLGLSGIEPIDKVVSVFSYETKALLALCETWQDSEQTIHALFPKGRSLN
SLQSILPCSIEELSAGMQIKLGNLVIHILPMTDQEGYDKLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYAQEDDYHLIK
LDAFMQLYCNNLPPELAKSWKVLNLAFNNEQQELTASHWQKINLVDLPLLQHAKQWPIDAINDVDLVSRLVQFVKNS
>Mature_396_residues
TSQNSPERWDIFCAVVDNYGDIGVTWRLAKQLSAEQPIAITLWVDDLKSFSHILPALDPELVSQVHFGVTINQWSTPLAI
AYQTGNVLIEAFACELPEQVKTSLIAMQQASKLDSSAAKPPLWLNLEYLSAESWVEGCHGLPSMQASGLKKYFYFPGFTA
KTGGLICENKLFEKRDAWQLNLQNRQDLFASLGLSGIEPIDKVVSVFSYETKALLALCETWQDSEQTIHALFPKGRSLNS
LQSILPCSIEELSAGMQIKLGNLVIHILPMTDQEGYDKLLWSCDFNIVRGEDSFLRAQWAAKPFIWHIYAQEDDYHLIKL
DAFMQLYCNNLPPELAKSWKVLNLAFNNEQQELTASHWQKINLVDLPLLQHAKQWPIDAINDVDLVSRLVQFVKNS

Specific function: Unknown

COG id: COG4394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44917; Mature: 44786

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQNSPERWDIFCAVVDNYGDIGVTWRLAKQLSAEQPIAITLWVDDLKSFSHILPALDP
CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCH
ELVSQVHFGVTINQWSTPLAIAYQTGNVLIEAFACELPEQVKTSLIAMQQASKLDSSAAK
HHHHHHHCCEEEECCCCCEEEEEECCCEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
PPLWLNLEYLSAESWVEGCHGLPSMQASGLKKYFYFPGFTAKTGGLICENKLFEKRDAWQ
CCEEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHCCCCCEE
LNLQNRQDLFASLGLSGIEPIDKVVSVFSYETKALLALCETWQDSEQTIHALFPKGRSLN
EECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHH
SLQSILPCSIEELSAGMQIKLGNLVIHILPMTDQEGYDKLLWSCDFNIVRGEDSFLRAQW
HHHHHCCCCHHHHCCCCEEEECCEEEEEEECCCCCCHHHHEEEECCEEEECCCHHHHHHH
AAKPFIWHIYAQEDDYHLIKLDAFMQLYCNNLPPELAKSWKVLNLAFNNEQQELTASHWQ
CCCCEEEEEEECCCCEEEEEHHHHHHHHHCCCCHHHHCCEEEEEEEECCCHHHHHHHHCC
KINLVDLPLLQHAKQWPIDAINDVDLVSRLVQFVKNS
CCCEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSQNSPERWDIFCAVVDNYGDIGVTWRLAKQLSAEQPIAITLWVDDLKSFSHILPALDP
CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCH
ELVSQVHFGVTINQWSTPLAIAYQTGNVLIEAFACELPEQVKTSLIAMQQASKLDSSAAK
HHHHHHHCCEEEECCCCCEEEEEECCCEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
PPLWLNLEYLSAESWVEGCHGLPSMQASGLKKYFYFPGFTAKTGGLICENKLFEKRDAWQ
CCEEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEECCHHHCCCCCEE
LNLQNRQDLFASLGLSGIEPIDKVVSVFSYETKALLALCETWQDSEQTIHALFPKGRSLN
EECCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHH
SLQSILPCSIEELSAGMQIKLGNLVIHILPMTDQEGYDKLLWSCDFNIVRGEDSFLRAQW
HHHHHCCCCHHHHCCCCEEEECCEEEEEEECCCCCCHHHHEEEECCEEEECCCHHHHHHH
AAKPFIWHIYAQEDDYHLIKLDAFMQLYCNNLPPELAKSWKVLNLAFNNEQQELTASHWQ
CCCCEEEEEEECCCCEEEEEHHHHHHHHHCCCCHHHHCCEEEEEEEECCCHHHHHHHHCC
KINLVDLPLLQHAKQWPIDAINDVDLVSRLVQFVKNS
CCCEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA