The gene/protein map for NC_012781 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is fldA [H]

Identifier: 167624167

GI number: 167624167

Start: 2718385

End: 2718912

Strand: Direct

Name: fldA [H]

Synonym: Shal_2243

Alternate gene names: 167624167

Gene position: 2718385-2718912 (Clockwise)

Preceding gene: 167624166

Following gene: 167624168

Centisome position: 52.01

GC content: 43.37

Gene sequence:

>528_bases
ATGGCAACAGTAGGTCTTTTTTTCGGGTCTGATACAGGCAACACCGAAGCCGTCGCCAAAATTATCCAGAAGAAACTGGG
TAAAAATATGGTTGAGGTAAAAGATATTGCCAAAAGTACCAAGGAACAGATTGCAGATTACGATCTGCTCATTTTTGGCA
TTCCAACTTGGTATTATGGTGAAGCACAATGTGACTGGGATGACTTCTTCCCTGAGCTTGAGCAAATCAACTTCGAAGAT
AAATTAGTCGCAATCTTTGGTTGTGGCGATCAGGAAGATTACGCAGAGTATTTCCTTGATGCTATGGGCATGGTCAACGA
AATCGTTGAAGCTCGTGGTGCAATCGTTATTGGTCACTGGCCGACCGAAGGCTATGATTTCGAAGAATCAAAAGGTTTAG
CAGACGACAAACACTTTGTTGGTCTAGGTATTGACGAAGACCGTCAGCCAGAGCTAACAGAGGCACGTGTTGATGCATGG
GTTAAGCAGATCTATGAAGAGATGTGTTTAGCTGAGCTAGAAGACTAA

Upstream 100 bases:

>100_bases
CCAACTAATCGAATCGATACTACAAAAGCAGGTTAGTGACTAACCCACTTTTAAATGCACGCATACCATTAATAGTTAAC
TAGATATTAAAGGAACAACA

Downstream 100 bases:

>100_bases
AGGAGCACGCAATAAAGGCATCATTTGCTTTATCGCATTCCTGTAAAAGCGGCATATTATTATGCCGCTTTTTTGTCTCT
ATGAATATTGGCTATTCAAT

Product: flavodoxin FldA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MATVGLFFGSDTGNTEAVAKIIQKKLGKNMVEVKDIAKSTKEQIADYDLLIFGIPTWYYGEAQCDWDDFFPELEQINFED
KLVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHWPTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEARVDAW
VKQIYEEMCLAELED

Sequences:

>Translated_175_residues
MATVGLFFGSDTGNTEAVAKIIQKKLGKNMVEVKDIAKSTKEQIADYDLLIFGIPTWYYGEAQCDWDDFFPELEQINFED
KLVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHWPTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEARVDAW
VKQIYEEMCLAELED
>Mature_174_residues
ATVGLFFGSDTGNTEAVAKIIQKKLGKNMVEVKDIAKSTKEQIADYDLLIFGIPTWYYGEAQCDWDDFFPELEQINFEDK
LVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHWPTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEARVDAWV
KQIYEEMCLAELED

Specific function: Low-potential electron donor to a number of redox enzymes (Potential). Involved in the reactivation of inactive cob(II)alamin in methionine synthase [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786900, Length=173, Percent_Identity=70.5202312138728, Blast_Score=266, Evalue=6e-73,
Organism=Escherichia coli, GI1789262, Length=168, Percent_Identity=41.6666666666667, Blast_Score=149, Evalue=1e-37,

Paralogues:

None

Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226
- InterPro:   IPR010086 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 19830; Mature: 19699

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVGLFFGSDTGNTEAVAKIIQKKLGKNMVEVKDIAKSTKEQIADYDLLIFGIPTWYYG
CCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEECC
EAQCDWDDFFPELEQINFEDKLVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHW
CCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
PTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEARVDAWVKQIYEEMCLAELED
CCCCCCCHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATVGLFFGSDTGNTEAVAKIIQKKLGKNMVEVKDIAKSTKEQIADYDLLIFGIPTWYYG
CEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEECC
EAQCDWDDFFPELEQINFEDKLVAIFGCGDQEDYAEYFLDAMGMVNEIVEARGAIVIGHW
CCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
PTEGYDFEESKGLADDKHFVGLGIDEDRQPELTEARVDAWVKQIYEEMCLAELED
CCCCCCCHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]