| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cls [H]
Identifier: 167624148
GI number: 167624148
Start: 2690957
End: 2692414
Strand: Direct
Name: cls [H]
Synonym: Shal_2224
Alternate gene names: 167624148
Gene position: 2690957-2692414 (Clockwise)
Preceding gene: 167624143
Following gene: 167624149
Centisome position: 51.48
GC content: 42.8
Gene sequence:
>1458_bases ATGTATGAGTTTTACCAGCTGCTAACCATAGCTGGAGTCTTTCTATACTGGTTGATTATTGCTGGTATAAGCATTCGTGT AGTCGCCAAAAGACGTACCATTGGTGTGTCGCTCGCTTGGTTAATGATTATCTACATCGTTCCCTTAGGTGGCGCTTTCG CGTACCTACTTTTCGGCGAACTCAATTTAGGAAAAAAAAGAGCTGTACGTGCAGAATTAATGTTCAAACCTTATGGTGAG TGGTTTAAAAAGCTCTATGAGTATCGTCAGTATCGGCCTCATGTTGCTAGTCTCTATGGTCAGTCAATCAGCGCCATTTG TGAGAAACAAGTTGGGATCCCTGCATTAGCCGATAACCACTTAACCCTGTGTAGTGAAACCTATGAGATTTTAGATAATC TAATTGACGACATACACCAAGCAACAGAAACTATATTACTGGAGTTTTATATCTGGCATCCAGGTGGCAGGGCCGATGAC GTTGCCAAGGCTCTGATACAAAGTGCGGCGCGAGGGGTAAAAATACGCTTATTACTTGACGCTGCAGGGAGTCGGCATTT TTTCAAAAGCCAGTGGCCAAAACTGATGAAGCAAAGTGGTATACATGTCGTTAGTGCACTACAAGTCTCGCCTTTTCGTA TGTTCTTTCGACGTTTAGATCTTAGATTACATCGTAAAATTGTTGTCATAGATAATCAAATTGCCTACACAGGTTCCATG AATTTGGTTGACCCGGAGTTTTTTAATCAAGATGCGGGAGTTGGCCAATGGATTGATGTTATGGTGCGGATCACTGGCAC CTCTGTACCCGTACTTAATAGTATTCACGCATGGGACTGGGAAGTTGAAACCAATGAACGTTTCCTTCCAGAACAACCTA AATGCCTGTCTCATGAAGACAGTGAAATTACCGATTTAGTACAAGTTATCCCATCAGGCCCCGGCATGCGTGAAGAGGTT ATTCACCGAGTGCTACTCCAAAGTATTTATCAGGCACAAAAAAGTATCGTTATAACAACGCCCTATTTTGTACCCAGTGA TAATCTCCACATGGCATTAATTATCGCCGCGCAGCGTAATGTCACGGTCGATATTATCGTTCCTGATAAAAATGACTCAT TGATGGTTGAGTGGGCAAGCCGCGCCTTTTTTAGTGAGCTGTTAGAAGCCGGCGTTAACATACATAGATTTAAAGGTGGC CTACTGCATACCAAGTCCGTCGTTATCGATAGTAATCATTGTTTAATCGGCACGGTTAACTGGGATATGCGTAGTCTATG GCTTAACTTTGAAGTTACCCTTGCTGTCGATAATCTAGGGTTTACTCAAAAACTTGAAACCGTACAGCAAGATTACCTTA AAAATACAGTCATGATCTCACCAGAGGAATGGAAAAAGCGACCTTTAGCCAGCCGTGCAGCAGAGCGAGTCTTCTATCTA TTTAGCCCGTTACTGTAA
Upstream 100 bases:
>100_bases TCACATGATCATTCTATATAGGGATTATTCACTCAAGTCCTCTTCAAGAGTATTTGCCACTTGGCTTTGAGAGAGTAAGG ACAATGTTATCAAACAAAAT
Downstream 100 bases:
>100_bases CTTTTGCGATCACTTTATTCATTGGCTTGATGAACGTATTAATGCGTTCATCAAGCAGTATTTCCCATTAATCTTGAATT GTTTTTTGGTAACCTATAAA
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGELNLGKKRAVRAELMFKPYGE WFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNHLTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADD VAKALIQSAARGVKIRLLLDAAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHEDSEITDLVQVIPSGPGMREEV IHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRNVTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGG LLHTKSVVIDSNHCLIGTVNWDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL FSPLL
Sequences:
>Translated_485_residues MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGELNLGKKRAVRAELMFKPYGE WFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNHLTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADD VAKALIQSAARGVKIRLLLDAAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHEDSEITDLVQVIPSGPGMREEV IHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRNVTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGG LLHTKSVVIDSNHCLIGTVNWDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL FSPLL >Mature_485_residues MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGELNLGKKRAVRAELMFKPYGE WFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNHLTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADD VAKALIQSAARGVKIRLLLDAAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHEDSEITDLVQVIPSGPGMREEV IHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRNVTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGG LLHTKSVVIDSNHCLIGTVNWDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL FSPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=487, Percent_Identity=49.8973305954826, Blast_Score=503, Evalue=1e-143, Organism=Escherichia coli, GI1787007, Length=337, Percent_Identity=27.5964391691395, Blast_Score=102, Evalue=5e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 55385; Mature: 55385
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGE CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCHHHHHHHHHHHHCCCHHHHHHHHHC LNLGKKRAVRAELMFKPYGEWFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNH CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCC LTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADDVAKALIQSAARGVKIRLLLD CHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEE AAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM CCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECEEEEECCC NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHED CCCCHHHCCCCCCCCHHEEEEEEECCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCCCC SEITDLVQVIPSGPGMREEVIHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRN HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCEEECCCCCEEEEEEEECCC VTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGGLLHTKSVVIDSNHCLIGTVN EEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEECCCEEEEEEC WDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL CCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEECCHHHHCCCHHHHHHHHHHHH FSPLL HHCCC >Mature Secondary Structure MYEFYQLLTIAGVFLYWLIIAGISIRVVAKRRTIGVSLAWLMIIYIVPLGGAFAYLLFGE CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCHHHHHHHHHHHHCCCHHHHHHHHHC LNLGKKRAVRAELMFKPYGEWFKKLYEYRQYRPHVASLYGQSISAICEKQVGIPALADNH CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCC LTLCSETYEILDNLIDDIHQATETILLEFYIWHPGGRADDVAKALIQSAARGVKIRLLLD CHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEE AAGSRHFFKSQWPKLMKQSGIHVVSALQVSPFRMFFRRLDLRLHRKIVVIDNQIAYTGSM CCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCEEEEEECEEEEECCC NLVDPEFFNQDAGVGQWIDVMVRITGTSVPVLNSIHAWDWEVETNERFLPEQPKCLSHED CCCCHHHCCCCCCCCHHEEEEEEECCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCCCC SEITDLVQVIPSGPGMREEVIHRVLLQSIYQAQKSIVITTPYFVPSDNLHMALIIAAQRN HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCEEECCCCCEEEEEEEECCC VTVDIIVPDKNDSLMVEWASRAFFSELLEAGVNIHRFKGGLLHTKSVVIDSNHCLIGTVN EEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEECCCEEEEEEC WDMRSLWLNFEVTLAVDNLGFTQKLETVQQDYLKNTVMISPEEWKKRPLASRAAERVFYL CCEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCEEECCHHHHCCCHHHHHHHHHHHH FSPLL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA