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The map label for this gene is lrp [H]

Identifier: 167624142

GI number: 167624142

Start: 2682896

End: 2683399

Strand: Reverse

Name: lrp [H]

Synonym: Shal_2218

Alternate gene names: 167624142

Gene position: 2683399-2682896 (Counterclockwise)

Preceding gene: 167624144

Following gene: 167624141

Centisome position: 51.34

GC content: 38.89

Gene sequence:

>504_bases
ATGGTTAATAATAAAAAGAGTCCTATAAAAGACTTAGATCGTATCGATAGAAATATACTTAATGAATTACAAATTGATGG
ACGAATCTCTAACGTCGAGTTATCTAAGCGAGTAGGTTTGAGTCCAACACCTTGCCTTGAAAGAGTTAAAAGGCTTGAAA
AGCAAGGTTATATCAAGGGTTATACGGCATTAGTCAACCCTCATTATCTGGGAGCCTCACTGCTAGTGTTTGTAGAGATC
ACCTTAAACCGTGATACAGCAGAAGTGTTTGACAAGTTCAACAAAGCTGTACAACTACTCGATGACATCCAAGAGTGTCA
TTTAGTCTCTGGTGATTTTGACTATCTATTAAAGACCCGTGTTTCAGATATGTCTGCATATCGTCGTTTATTAGGCGAAA
CCCTTCTGAAATTGCCGGCAGTTTCCGACACTCGTACCTATGTTGTTATGGAAGAGGTCAAGCAAACAAATCGTGTCGCG
ATCAATACCGTTTCAGATACATAA

Upstream 100 bases:

>100_bases
AGGGAAATCTAGTATAGTATTCATTCCGTAGTTTATGCTGCTGAAGATTTTTTAAAAGCAGGCAATAATATCGTCCTAAA
CGTCAGCCAGGGTTATATAT

Downstream 100 bases:

>100_bases
GTAATATATTAAATGACAAAAGGAGCCTTGAGGGCTCCTTTTTTTATACAAAATCCAATATGATACAAATTGATGCAAAA
TGCTTTTATGCATAACTATT

Product: leucine-responsive transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MVNNKKSPIKDLDRIDRNILNELQIDGRISNVELSKRVGLSPTPCLERVKRLEKQGYIKGYTALVNPHYLGASLLVFVEI
TLNRDTAEVFDKFNKAVQLLDDIQECHLVSGDFDYLLKTRVSDMSAYRRLLGETLLKLPAVSDTRTYVVMEEVKQTNRVA
INTVSDT

Sequences:

>Translated_167_residues
MVNNKKSPIKDLDRIDRNILNELQIDGRISNVELSKRVGLSPTPCLERVKRLEKQGYIKGYTALVNPHYLGASLLVFVEI
TLNRDTAEVFDKFNKAVQLLDDIQECHLVSGDFDYLLKTRVSDMSAYRRLLGETLLKLPAVSDTRTYVVMEEVKQTNRVA
INTVSDT
>Mature_167_residues
MVNNKKSPIKDLDRIDRNILNELQIDGRISNVELSKRVGLSPTPCLERVKRLEKQGYIKGYTALVNPHYLGASLLVFVEI
TLNRDTAEVFDKFNKAVQLLDDIQECHLVSGDFDYLLKTRVSDMSAYRRLLGETLLKLPAVSDTRTYVVMEEVKQTNRVA
INTVSDT

Specific function: Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operons; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=163, Percent_Identity=81.5950920245399, Blast_Score=278, Evalue=2e-76,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=33.112582781457, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1790182, Length=140, Percent_Identity=25.7142857142857, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 19000; Mature: 19000

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNNKKSPIKDLDRIDRNILNELQIDGRISNVELSKRVGLSPTPCLERVKRLEKQGYIKG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHCCCCCH
YTALVNPHYLGASLLVFVEITLNRDTAEVFDKFNKAVQLLDDIQECHLVSGDFDYLLKTR
HHHHCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSDMSAYRRLLGETLLKLPAVSDTRTYVVMEEVKQTNRVAINTVSDT
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCC
>Mature Secondary Structure
MVNNKKSPIKDLDRIDRNILNELQIDGRISNVELSKRVGLSPTPCLERVKRLEKQGYIKG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHCCCCCH
YTALVNPHYLGASLLVFVEITLNRDTAEVFDKFNKAVQLLDDIQECHLVSGDFDYLLKTR
HHHHCCCHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VSDMSAYRRLLGETLLKLPAVSDTRTYVVMEEVKQTNRVAINTVSDT
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]