| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is ftsK [H]
Identifier: 167624141
GI number: 167624141
Start: 2680124
End: 2682706
Strand: Reverse
Name: ftsK [H]
Synonym: Shal_2217
Alternate gene names: 167624141
Gene position: 2682706-2680124 (Counterclockwise)
Preceding gene: 167624142
Following gene: 167624140
Centisome position: 51.32
GC content: 44.1
Gene sequence:
>2583_bases TTGTCTAAGGGAAGTAGTGTTAAAACGCTCTCAGGCGTACAACGACTATTAGAAGGTAGTCTCATCATTTGTTGCATGTT AGCAACATACGTTCTAATCGCTTTGAGCAGTTTCCATTCTTCTGATCCAGGGTGGAGCCAGTCAAATTTTGATGGTGAAA TTAATAATCTAACGGGTGCGGTTGGCGCGTGGTTAGCCGATGTTTTATTTTACTTTTTTGGTTATTGCGCATACATCATC CCCATTATTATCGCCTTAACAGGTTGGTTGCTATTTAAGCGGACGCATAAGCTTTTAGAAATAGACTACTTCTCTGTTGG TCTTCGTTTAATTGGCTTCTTACTGATTGTTTTTAGTCTTGCCGCATTGGCGAGTATGAATGCAAACGGACTATATGGTT TTTCTGCTGGCGGGGTCGCGGGTGATGTTATTGCTCAAGCCATGCTACCTTACTTTAATAAGTTAGGTACGACGCTGTTA TTGCTCTGTTTCGTGGGCGCTGGTTTTACACTACTTACCGGTATTAGCTGGTTAACTGTGATTGATTTAACCGGGTATGC AACGATTTGGTTAGTCAAAAAACTGCGAGATCTGCCTAATAAATTTAAGCCTGATATGGGCGACACCGAAGATACACGCG GTTTTATGTCAGTGGTTGAGCGCTTTAAAGAGCGACGTAACAAACAATCAGATGATGAATATGAATTCGAAGACGGCAGT GAACAAGATGAATTTGATTCACAGCAAAACGCCCAAAACAGTAAAACGACAGAACGTGAGTTAAAGGCCCAACAAAAAGC AGAGCCAAAAATTATTGAACCTCAATTCAATGCTAAAGTGAGTGAACCTACATTGACTGGGGCTGAAGCTCAGCAAGCCA CTTTAGCCGACGTTGTTGAGCCAACAATCGCTGCGCCGTGGGTTAACGAAAGCAGTGATGAAATTGAATCAATTGACTTC AATAACAATGCATCATCAGGGGCTGTTAATGCCGTTAAACGTATCGAAGATGACAAGGCTAAGATTGTTGATGGGATTGT CGTATTACCTGGTCAAGAAATTGAACAGGAACGTCCGCCTATGGCACCGCTACCTTGTATCTCTTTATTAGATGTACCAA ATCGTAAGACCAACCCAATCAGTCAAGAAGAGTTAGAGCAAATAGGTAAGTTAGTTGAAGTTAAACTCGCCGATTTCAAC ATTACCGCAAATGTTGTTGGTGTTTATCCTGGCCCAGTTGTAACTCGTTTCGAGCTTGAATTAGCACCAGGGGTTAAAGC CTCTAAAATCACCAATCTTTCTAAAGATTTAGCACGTTCACTATTAGCTGAAAACGTGCGAGTTGTTGAGGTGATCCCTG GTAAAGCTTATGTAGGATTAGAGCTGCCGAACAAGTTCCGTGAAACGGTCTTTATGCGCGATGTGCTCGACTGTGAAGAC TTTAGAGACGGCCCATCACATCTAAGTATGGTATTAGGTGCCGATATTGGTGGTAAGCCTGTTGTCGTTGACCTAGGAAA AATGCCACACCTTCTTGTTGCGGGCACGACGGGCTCGGGTAAGTCTGTTGGCGTGAACGTGATGATCACCAGCTTACTGT ACAAATCAGGTCCTGATGATGTTCGTTTCATCATGATTGACCCTAAAATGCTTGAGCTATCAGTTTATGAAGGGATCCCG CACTTACTGTGTGAAGTGGTAACCGACATGAAAGAAGCAGCTAACTCGCTACGTTGGTGTGTCGGCGAGATGGAGCGTCG TTATAAACTGATGTCAGCACTTGGCGTGCGTAATCTCAAAGGCTATAACGCCAAAATTAAACAGGCTAAAGAGTCCGGTG ACCCAATTTTTGATCCGCTTTGGAAGTCTTCTGACAGCATGGAGCCTGAAGCGCCTGAATTAGATAAACTGCCATCTATC GTTGTTGTCGTCGATGAATTTGCCGACATGATGATGATTGTAGGTAAAAAAGTCGAAGAATTGATTGCTCGTATCGCACA AAAAGCACGTGCTGCGGGGATCCATTTAATCCTTGCAACTCAAAGGCCGTCAGTTGATGTGATCACAGGTTTGATTAAAG CTAACATTCCAACACGGATGGCGTTCCAAGTTTCATCCCGCATTGACTCAAGAACGATTCTCGATCAACAAGGCGCTGAA ACACTACTCGGTATGGGTGACATGTTGTACTTACCACCAGGAACCAGCGTGCCTATCCGTGTTCATGGTGCATTTATTGA TGACCATGAAGTTCACAAAGTAGTTGCCGATTGGCATGCACGAGGTAAGCCGCAATATATCGAGGAGATTTTGCAAGGTT CTGCCGAAGGTGAACAGGTATTATTACCAGGTGAAGCCGGTGATTCAGAAGAAGAGATGGATGCCTTATACGATGATGCT GTTGCGTTCGTGACGCAAACTCGCCGAGGTTCGATATCAAGTGTGCAGCGGAAGTTTAAAATTGGTTATAACCGCGCAGC TCGTATTATTGAACAGATGGAACTTCAAGGGGTTGTAAGTGCCCAAGGCCATAACGGTAATCGAGAAGTGTTAGCGCCGC CACCGCCAAAAGACTACGTCTAA
Upstream 100 bases:
>100_bases GCATAACTATTCAGTAGTGCCCAGAAGTCGCAAACGCTGCATAAAGTCTTAAATTCTGGTATCTTGTCCTTAATTAACGT TTTTTAGTGTAGGTTTTCCA
Downstream 100 bases:
>100_bases TTAACGAATAAGTGTACTGACCCACAGAATATATTCAGTGTTAAGCCTAGAGTAGGCTTAACTCGGAGAACAAAATGAAA AAGATTTTTGCTATTGCAGC
Product: cell divisionFtsK/SpoIIIE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 860; Mature: 859
Protein sequence:
>860_residues MSKGSSVKTLSGVQRLLEGSLIICCMLATYVLIALSSFHSSDPGWSQSNFDGEINNLTGAVGAWLADVLFYFFGYCAYII PIIIALTGWLLFKRTHKLLEIDYFSVGLRLIGFLLIVFSLAALASMNANGLYGFSAGGVAGDVIAQAMLPYFNKLGTTLL LLCFVGAGFTLLTGISWLTVIDLTGYATIWLVKKLRDLPNKFKPDMGDTEDTRGFMSVVERFKERRNKQSDDEYEFEDGS EQDEFDSQQNAQNSKTTERELKAQQKAEPKIIEPQFNAKVSEPTLTGAEAQQATLADVVEPTIAAPWVNESSDEIESIDF NNNASSGAVNAVKRIEDDKAKIVDGIVVLPGQEIEQERPPMAPLPCISLLDVPNRKTNPISQEELEQIGKLVEVKLADFN ITANVVGVYPGPVVTRFELELAPGVKASKITNLSKDLARSLLAENVRVVEVIPGKAYVGLELPNKFRETVFMRDVLDCED FRDGPSHLSMVLGADIGGKPVVVDLGKMPHLLVAGTTGSGKSVGVNVMITSLLYKSGPDDVRFIMIDPKMLELSVYEGIP HLLCEVVTDMKEAANSLRWCVGEMERRYKLMSALGVRNLKGYNAKIKQAKESGDPIFDPLWKSSDSMEPEAPELDKLPSI VVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRMAFQVSSRIDSRTILDQQGAE TLLGMGDMLYLPPGTSVPIRVHGAFIDDHEVHKVVADWHARGKPQYIEEILQGSAEGEQVLLPGEAGDSEEEMDALYDDA VAFVTQTRRGSISSVQRKFKIGYNRAARIIEQMELQGVVSAQGHNGNREVLAPPPPKDYV
Sequences:
>Translated_860_residues MSKGSSVKTLSGVQRLLEGSLIICCMLATYVLIALSSFHSSDPGWSQSNFDGEINNLTGAVGAWLADVLFYFFGYCAYII PIIIALTGWLLFKRTHKLLEIDYFSVGLRLIGFLLIVFSLAALASMNANGLYGFSAGGVAGDVIAQAMLPYFNKLGTTLL LLCFVGAGFTLLTGISWLTVIDLTGYATIWLVKKLRDLPNKFKPDMGDTEDTRGFMSVVERFKERRNKQSDDEYEFEDGS EQDEFDSQQNAQNSKTTERELKAQQKAEPKIIEPQFNAKVSEPTLTGAEAQQATLADVVEPTIAAPWVNESSDEIESIDF NNNASSGAVNAVKRIEDDKAKIVDGIVVLPGQEIEQERPPMAPLPCISLLDVPNRKTNPISQEELEQIGKLVEVKLADFN ITANVVGVYPGPVVTRFELELAPGVKASKITNLSKDLARSLLAENVRVVEVIPGKAYVGLELPNKFRETVFMRDVLDCED FRDGPSHLSMVLGADIGGKPVVVDLGKMPHLLVAGTTGSGKSVGVNVMITSLLYKSGPDDVRFIMIDPKMLELSVYEGIP HLLCEVVTDMKEAANSLRWCVGEMERRYKLMSALGVRNLKGYNAKIKQAKESGDPIFDPLWKSSDSMEPEAPELDKLPSI VVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRMAFQVSSRIDSRTILDQQGAE TLLGMGDMLYLPPGTSVPIRVHGAFIDDHEVHKVVADWHARGKPQYIEEILQGSAEGEQVLLPGEAGDSEEEMDALYDDA VAFVTQTRRGSISSVQRKFKIGYNRAARIIEQMELQGVVSAQGHNGNREVLAPPPPKDYV >Mature_859_residues SKGSSVKTLSGVQRLLEGSLIICCMLATYVLIALSSFHSSDPGWSQSNFDGEINNLTGAVGAWLADVLFYFFGYCAYIIP IIIALTGWLLFKRTHKLLEIDYFSVGLRLIGFLLIVFSLAALASMNANGLYGFSAGGVAGDVIAQAMLPYFNKLGTTLLL LCFVGAGFTLLTGISWLTVIDLTGYATIWLVKKLRDLPNKFKPDMGDTEDTRGFMSVVERFKERRNKQSDDEYEFEDGSE QDEFDSQQNAQNSKTTERELKAQQKAEPKIIEPQFNAKVSEPTLTGAEAQQATLADVVEPTIAAPWVNESSDEIESIDFN NNASSGAVNAVKRIEDDKAKIVDGIVVLPGQEIEQERPPMAPLPCISLLDVPNRKTNPISQEELEQIGKLVEVKLADFNI TANVVGVYPGPVVTRFELELAPGVKASKITNLSKDLARSLLAENVRVVEVIPGKAYVGLELPNKFRETVFMRDVLDCEDF RDGPSHLSMVLGADIGGKPVVVDLGKMPHLLVAGTTGSGKSVGVNVMITSLLYKSGPDDVRFIMIDPKMLELSVYEGIPH LLCEVVTDMKEAANSLRWCVGEMERRYKLMSALGVRNLKGYNAKIKQAKESGDPIFDPLWKSSDSMEPEAPELDKLPSIV VVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRMAFQVSSRIDSRTILDQQGAET LLGMGDMLYLPPGTSVPIRVHGAFIDDHEVHKVVADWHARGKPQYIEEILQGSAEGEQVLLPGEAGDSEEEMDALYDDAV AFVTQTRRGSISSVQRKFKIGYNRAARIIEQMELQGVVSAQGHNGNREVLAPPPPKDYV
Specific function: DNA motor protein, which is both required to move DNA out of the region of the septum during cell division and for the septum formation. Tracks DNA in an ATP-dependent manner by generating positive supercoils in front of it and negative supercoils behind
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Cytoplasmic side. Note=Located at the septum. The large C-terminal part of the protein is cytoplasmic (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain [H]
Homologues:
Organism=Escherichia coli, GI1787117, Length=498, Percent_Identity=71.0843373493976, Blast_Score=711, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018541 - InterPro: IPR002543 [H]
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE [H]
EC number: NA
Molecular weight: Translated: 94275; Mature: 94143
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKGSSVKTLSGVQRLLEGSLIICCMLATYVLIALSSFHSSDPGWSQSNFDGEINNLTGA CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH VGAWLADVLFYFFGYCAYIIPIIIALTGWLLFKRTHKLLEIDYFSVGLRLIGFLLIVFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALASMNANGLYGFSAGGVAGDVIAQAMLPYFNKLGTTLLLLCFVGAGFTLLTGISWLTV HHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH IDLTGYATIWLVKKLRDLPNKFKPDMGDTEDTRGFMSVVERFKERRNKQSDDEYEFEDGS HHHCCHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EQDEFDSQQNAQNSKTTERELKAQQKAEPKIIEPQFNAKVSEPTLTGAEAQQATLADVVE CCHHCCCHHCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHC PTIAAPWVNESSDEIESIDFNNNASSGAVNAVKRIEDDKAKIVDGIVVLPGQEIEQERPP CHHCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHCCHHHHHHCCEEECCCCHHHHCCCC MAPLPCISLLDVPNRKTNPISQEELEQIGKLVEVKLADFNITANVVGVYPGPVVTRFELE CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEEECEEEEEEEEEECCCCEEEEEEEE LAPGVKASKITNLSKDLARSLLAENVRVVEVIPGKAYVGLELPNKFRETVFMRDVLDCED ECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHCHHH FRDGPSHLSMVLGADIGGKPVVVDLGKMPHLLVAGTTGSGKSVGVNVMITSLLYKSGPDD CCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC VRFIMIDPKMLELSVYEGIPHLLCEVVTDMKEAANSLRWCVGEMERRYKLMSALGVRNLK EEEEEECCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GYNAKIKQAKESGDPIFDPLWKSSDSMEPEAPELDKLPSIVVVVDEFADMMMIVGKKVEE CCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHH LIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRMAFQVSSRIDSRTILDQQGAE HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCHH TLLGMGDMLYLPPGTSVPIRVHGAFIDDHEVHKVVADWHARGKPQYIEEILQGSAEGEQV HHHCCCCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEE LLPGEAGDSEEEMDALYDDAVAFVTQTRRGSISSVQRKFKIGYNRAARIIEQMELQGVVS EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHE AQGHNGNREVLAPPPPKDYV ECCCCCCCCEECCCCCCCCC >Mature Secondary Structure SKGSSVKTLSGVQRLLEGSLIICCMLATYVLIALSSFHSSDPGWSQSNFDGEINNLTGA CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH VGAWLADVLFYFFGYCAYIIPIIIALTGWLLFKRTHKLLEIDYFSVGLRLIGFLLIVFSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALASMNANGLYGFSAGGVAGDVIAQAMLPYFNKLGTTLLLLCFVGAGFTLLTGISWLTV HHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH IDLTGYATIWLVKKLRDLPNKFKPDMGDTEDTRGFMSVVERFKERRNKQSDDEYEFEDGS HHHCCHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EQDEFDSQQNAQNSKTTERELKAQQKAEPKIIEPQFNAKVSEPTLTGAEAQQATLADVVE CCHHCCCHHCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHC PTIAAPWVNESSDEIESIDFNNNASSGAVNAVKRIEDDKAKIVDGIVVLPGQEIEQERPP CHHCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHHCCHHHHHHCCEEECCCCHHHHCCCC MAPLPCISLLDVPNRKTNPISQEELEQIGKLVEVKLADFNITANVVGVYPGPVVTRFELE CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHEEEEECEEEEEEEEEECCCCEEEEEEEE LAPGVKASKITNLSKDLARSLLAENVRVVEVIPGKAYVGLELPNKFRETVFMRDVLDCED ECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHCHHH FRDGPSHLSMVLGADIGGKPVVVDLGKMPHLLVAGTTGSGKSVGVNVMITSLLYKSGPDD CCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC VRFIMIDPKMLELSVYEGIPHLLCEVVTDMKEAANSLRWCVGEMERRYKLMSALGVRNLK EEEEEECCCEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GYNAKIKQAKESGDPIFDPLWKSSDSMEPEAPELDKLPSIVVVVDEFADMMMIVGKKVEE CCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHH LIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRMAFQVSSRIDSRTILDQQGAE HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCHH TLLGMGDMLYLPPGTSVPIRVHGAFIDDHEVHKVVADWHARGKPQYIEEILQGSAEGEQV HHHCCCCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEE LLPGEAGDSEEEMDALYDDAVAFVTQTRRGSISSVQRKFKIGYNRAARIIEQMELQGVVS EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHE AQGHNGNREVLAPPPPKDYV ECCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]