Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624083

Identifier: 167624083

GI number: 167624083

Start: 2607619

End: 2608464

Strand: Direct

Name: 167624083

Synonym: Shal_2159

Alternate gene names: NA

Gene position: 2607619-2608464 (Clockwise)

Preceding gene: 167624081

Following gene: 167624086

Centisome position: 49.89

GC content: 38.42

Gene sequence:

>846_bases
ATGATACTGACATCTTTGATTGATAATACTAGATTGAATCATCGAACTGACCTAACAATAGAAAGAGGGTTATCTATTCA
CGTTAGCACTATGGGGAAGAGCATATTATTTGATGCTGGGAGTAGCAGTGCCTTTTGTGATAATGCCGCCTTATTGAACG
TGGATATCAAAGCTGTTGATGCAGCAGTGATTTCACATCGTCATCATGATCATTGTAATGGCGTTAACCATTTTATAGAC
AATAACTCGAAAGCTCAGGTCTATTTCCGGGAATGCGACAAGGCCAATTATGTTTTCAAAGCATTTGGTTTTAAAAGTAA
TGTAGGTATAAATAAGCAGTTACTGACTAAAGCTACTAACCGCTTGACCTTTGTTAACCAATTAACGGAGATATTTCCTA
ATATTTTTATCATCACTAATTTGGTTGATAAATACCCCAAGCCCAAAGGTAATAAATACCTTTTCACTGATTCTGAGGGC
TGTTGTAAACCCGATACATTTGATCATGAATTACTGCTAGTTATAAAGGAAGCTGATGGGCTTGTCGTGTTTACGGGTTG
CGCTCATAGTGGTGTGCTCAATATGATAGAGACTGCCGTTAATTCATTTCCCACAGCGAAAATCAAAGCCGTTGTTGGTG
GTTTTCATTTGGTCGGATTACCGCTCTTTAACAGCATCGGCGGGACTAAGCAGCAAATCGAAGAAATGGGGAAGTTGATG
TTAAATTACCCAATAGATAAGTTGTACACTGGACATTGTACAGGCATGAAAGCCTATAACATATTGAAAGGTGTGCTTGG
AGAACGCTTAGAATATTTTCCAACAGGTCGTAGCATTAACATTTGA

Upstream 100 bases:

>100_bases
GCTTTAAAAGCATGTAATTATCAGTAAGATAAAACGCGCATGTTGTATATTAGAATGTTAAGCGCTAAGGCTCCAATTCA
TATTTTTAAGTGACTTAATT

Downstream 100 bases:

>100_bases
CTTTATATAATCACTTATCAGATAAAATTTGTCGGTGATTTGTGTCGTTCAGATAGGTTCACGAGTATTAGTGGCTTAAC
AAGGCTTACACTGTAAGTGG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MILTSLIDNTRLNHRTDLTIERGLSIHVSTMGKSILFDAGSSSAFCDNAALLNVDIKAVDAAVISHRHHDHCNGVNHFID
NNSKAQVYFRECDKANYVFKAFGFKSNVGINKQLLTKATNRLTFVNQLTEIFPNIFIITNLVDKYPKPKGNKYLFTDSEG
CCKPDTFDHELLLVIKEADGLVVFTGCAHSGVLNMIETAVNSFPTAKIKAVVGGFHLVGLPLFNSIGGTKQQIEEMGKLM
LNYPIDKLYTGHCTGMKAYNILKGVLGERLEYFPTGRSINI

Sequences:

>Translated_281_residues
MILTSLIDNTRLNHRTDLTIERGLSIHVSTMGKSILFDAGSSSAFCDNAALLNVDIKAVDAAVISHRHHDHCNGVNHFID
NNSKAQVYFRECDKANYVFKAFGFKSNVGINKQLLTKATNRLTFVNQLTEIFPNIFIITNLVDKYPKPKGNKYLFTDSEG
CCKPDTFDHELLLVIKEADGLVVFTGCAHSGVLNMIETAVNSFPTAKIKAVVGGFHLVGLPLFNSIGGTKQQIEEMGKLM
LNYPIDKLYTGHCTGMKAYNILKGVLGERLEYFPTGRSINI
>Mature_281_residues
MILTSLIDNTRLNHRTDLTIERGLSIHVSTMGKSILFDAGSSSAFCDNAALLNVDIKAVDAAVISHRHHDHCNGVNHFID
NNSKAQVYFRECDKANYVFKAFGFKSNVGINKQLLTKATNRLTFVNQLTEIFPNIFIITNLVDKYPKPKGNKYLFTDSEG
CCKPDTFDHELLLVIKEADGLVVFTGCAHSGVLNMIETAVNSFPTAKIKAVVGGFHLVGLPLFNSIGGTKQQIEEMGKLM
LNYPIDKLYTGHCTGMKAYNILKGVLGERLEYFPTGRSINI

Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 31091; Mature: 31091

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTSLIDNTRLNHRTDLTIERGLSIHVSTMGKSILFDAGSSSAFCDNAALLNVDIKAVD
CEEHHHHCCCCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCCEECCEEEEEEEHHHHH
AAVISHRHHDHCNGVNHFIDNNSKAQVYFRECDKANYVFKAFGFKSNVGINKQLLTKATN
HHHHHCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHH
RLTFVNQLTEIFPNIFIITNLVDKYPKPKGNKYLFTDSEGCCKPDTFDHELLLVIKEADG
HHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCC
LVVFTGCAHSGVLNMIETAVNSFPTAKIKAVVGGFHLVGLPLFNSIGGTKQQIEEMGKLM
EEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHEEHHHHHHHCCCCHHHHHHHHHHH
LNYPIDKLYTGHCTGMKAYNILKGVLGERLEYFPTGRSINI
HCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MILTSLIDNTRLNHRTDLTIERGLSIHVSTMGKSILFDAGSSSAFCDNAALLNVDIKAVD
CEEHHHHCCCCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCCEECCEEEEEEEHHHHH
AAVISHRHHDHCNGVNHFIDNNSKAQVYFRECDKANYVFKAFGFKSNVGINKQLLTKATN
HHHHHCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHH
RLTFVNQLTEIFPNIFIITNLVDKYPKPKGNKYLFTDSEGCCKPDTFDHELLLVIKEADG
HHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCC
LVVFTGCAHSGVLNMIETAVNSFPTAKIKAVVGGFHLVGLPLFNSIGGTKQQIEEMGKLM
EEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHEEHHHHHHHCCCCHHHHHHHHHHH
LNYPIDKLYTGHCTGMKAYNILKGVLGERLEYFPTGRSINI
HCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]