Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624081

Identifier: 167624081

GI number: 167624081

Start: 2605174

End: 2605812

Strand: Direct

Name: 167624081

Synonym: Shal_2157

Alternate gene names: NA

Gene position: 2605174-2605812 (Clockwise)

Preceding gene: 167624080

Following gene: 167624083

Centisome position: 49.84

GC content: 43.19

Gene sequence:

>639_bases
ATGCCAGCCAATCAGCCAAACATTCAAAACGAACCTTTAGCGCTTTATTTTATTTATGATTCTCATTGTCCATGGAGCTA
TGCTGCTACACCGGTTGTCGCTGAGCTGATTAACGCGTTCGACTTTGCAGAGACTCACTTACTGCACTGCGCGCATTATA
ATGGCAAAGATGCGCCTAAAATGGCGCAAATCAACCAGGTTAGGGCACTTAGCCCGGTGACGTTCGGTGATGCTTACTTG
AAACAAGCGGGCAATAAAGCGAATTCATTTAAAACGGCTAACTTCATGTCTTGGGTGCAATCAAAACAAGCCGATAAAGA
GTTTGAGCTACTGCAAGCGCTGCAGCAGCAACACTTTGTTGAGGCTAACCCATTAAATTATCGAGAAGATTTCGACAAAA
TTATCAATCAATATAAATTATCGCCATCAAACAAAGTCTTCAAAGATACCATTAGTCATGAAGCAGAGAGTGTTTTAGCG
GGTATTGCAGAGATTGGTGAGGCCATTGGTACTTCGGCGTTTCCAGTACTCGTGATGACATTAGGCGATGAAGCGATATT
TATCGACCACTCTCAATACTTAGCTAAACCGGAAGATGTAGTTGCTGCGGCAAACAAAGAGTTAGCGGCACTCAGTTAA

Upstream 100 bases:

>100_bases
TTACGCATAAATTGACCTAGATAACGCAATTGATATTTGAATAAAAACCCTAAAGCCCTTAGGATCGGCGCTACAGAATT
TATTAACAAGACAACCGTCA

Downstream 100 bases:

>100_bases
CATTAGTGCTTGCGCCTACAACTGCGCAAATCACGCAACAGATAAGCGTTAAATTTGCGCTAGCAGAGAGTTATTGTTAG
CGCTATTTAACCGCCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPANQPNIQNEPLALYFIYDSHCPWSYAATPVVAELINAFDFAETHLLHCAHYNGKDAPKMAQINQVRALSPVTFGDAYL
KQAGNKANSFKTANFMSWVQSKQADKEFELLQALQQQHFVEANPLNYREDFDKIINQYKLSPSNKVFKDTISHEAESVLA
GIAEIGEAIGTSAFPVLVMTLGDEAIFIDHSQYLAKPEDVVAAANKELAALS

Sequences:

>Translated_212_residues
MPANQPNIQNEPLALYFIYDSHCPWSYAATPVVAELINAFDFAETHLLHCAHYNGKDAPKMAQINQVRALSPVTFGDAYL
KQAGNKANSFKTANFMSWVQSKQADKEFELLQALQQQHFVEANPLNYREDFDKIINQYKLSPSNKVFKDTISHEAESVLA
GIAEIGEAIGTSAFPVLVMTLGDEAIFIDHSQYLAKPEDVVAAANKELAALS
>Mature_211_residues
PANQPNIQNEPLALYFIYDSHCPWSYAATPVVAELINAFDFAETHLLHCAHYNGKDAPKMAQINQVRALSPVTFGDAYLK
QAGNKANSFKTANFMSWVQSKQADKEFELLQALQQQHFVEANPLNYREDFDKIINQYKLSPSNKVFKDTISHEAESVLAG
IAEIGEAIGTSAFPVLVMTLGDEAIFIDHSQYLAKPEDVVAAANKELAALS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23493; Mature: 23361

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANQPNIQNEPLALYFIYDSHCPWSYAATPVVAELINAFDFAETHLLHCAHYNGKDAPK
CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
MAQINQVRALSPVTFGDAYLKQAGNKANSFKTANFMSWVQSKQADKEFELLQALQQQHFV
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
EANPLNYREDFDKIINQYKLSPSNKVFKDTISHEAESVLAGIAEIGEAIGTSAFPVLVMT
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEE
LGDEAIFIDHSQYLAKPEDVVAAANKELAALS
ECCCEEEEECHHHHCCHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
PANQPNIQNEPLALYFIYDSHCPWSYAATPVVAELINAFDFAETHLLHCAHYNGKDAPK
CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
MAQINQVRALSPVTFGDAYLKQAGNKANSFKTANFMSWVQSKQADKEFELLQALQQQHFV
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
EANPLNYREDFDKIINQYKLSPSNKVFKDTISHEAESVLAGIAEIGEAIGTSAFPVLVMT
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEE
LGDEAIFIDHSQYLAKPEDVVAAANKELAALS
ECCCEEEEECHHHHCCHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA