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The map label for this gene is etfB [H]

Identifier: 167624029

GI number: 167624029

Start: 2537507

End: 2538256

Strand: Direct

Name: etfB [H]

Synonym: Shal_2105

Alternate gene names: 167624029

Gene position: 2537507-2538256 (Clockwise)

Preceding gene: 167624028

Following gene: 167624030

Centisome position: 48.55

GC content: 42.67

Gene sequence:

>750_bases
ATGAAAATACTGGTACCTATAAAACGAGTGGTCGATCATAACGTAAAAGTTCGTATCAAATCTGATGGCAGTGGTGTTGA
CTTTAATAACGTCAAAATGTCAATCAATCCATTTGATGAAATTGCGATTGAAGAAGCGGTACGTCTTAAGGAAGCTGGTA
TTGCTACAGAAGTAATAGCGGTGAGCTGTGGGGCAAAAGTTTGCCAAGAAACCTTACGTACTGCTTTGGCCGTTGGTGCT
GATCGTGCAATTCAGGTCGATACTGATGCCGAATTAGAACCTTTGGCTGTCGCAAAAACACTAAAAGAAATTGTAAAGCG
GGAAGCCCCTCAGCTGGTTATTTGTGGCAAACAAGCAATCGATGACGATTGTAATCAAACAGGGCAGATGTTGTCTGCTT
TATTAGGTTGGTCACAAGGTACTTTCGCTTCAGAGCTTAAAGTAGATGGTAATGAGCTAGCTGTGACTCGAGAGATCGAT
GGCGGGCTTGAAACTATCGCGCTTGGTTTGCCTGCAGTTGTTAGCTGTGACCTTCGATTAAACCAACCTCGATACGCATC
ACTACCTAATATCATGAAGGCTAAGCGTAAGCCATTAGAAGTTATTGAAATTAGTGAACTTAATGTAAATATTACACCAC
GGATTAAAGCCATAAAATATACCCTCCCGGCGTCACGCAGCGCAGGCGTTATGGTCGATGACGTTGCAGAGTTACTGAGT
AAATTGCGTGAAGAAGCGCGAGTATTATAA

Upstream 100 bases:

>100_bases
CGGAAAAGCTTATATACCGCGGGAGATGCAGGCTACAACGATTATCAATCTCATCAAATAATAACCACTAGTTAAAAGCA
ACATATTAAAGGAATAAATA

Downstream 100 bases:

>100_bases
GGAGATACTTAAATGAAAATGTTAGTTATAGCTGAACACGATAATACTCGAATAGCGGACGTGACATTCAATGCCATACA
AGCTGCAGCGCAACTTGCAA

Product: electron transfer flavoprotein subunit alpha/beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVPIKRVVDHNVKVRIKSDGSGVDFNNVKMSINPFDEIAIEEAVRLKEAGIATEVIAVSCGAKVCQETLRTALAVGA
DRAIQVDTDAELEPLAVAKTLKEIVKREAPQLVICGKQAIDDDCNQTGQMLSALLGWSQGTFASELKVDGNELAVTREID
GGLETIALGLPAVVSCDLRLNQPRYASLPNIMKAKRKPLEVIEISELNVNITPRIKAIKYTLPASRSAGVMVDDVAELLS
KLREEARVL

Sequences:

>Translated_249_residues
MKILVPIKRVVDHNVKVRIKSDGSGVDFNNVKMSINPFDEIAIEEAVRLKEAGIATEVIAVSCGAKVCQETLRTALAVGA
DRAIQVDTDAELEPLAVAKTLKEIVKREAPQLVICGKQAIDDDCNQTGQMLSALLGWSQGTFASELKVDGNELAVTREID
GGLETIALGLPAVVSCDLRLNQPRYASLPNIMKAKRKPLEVIEISELNVNITPRIKAIKYTLPASRSAGVMVDDVAELLS
KLREEARVL
>Mature_249_residues
MKILVPIKRVVDHNVKVRIKSDGSGVDFNNVKMSINPFDEIAIEEAVRLKEAGIATEVIAVSCGAKVCQETLRTALAVGA
DRAIQVDTDAELEPLAVAKTLKEIVKREAPQLVICGKQAIDDDCNQTGQMLSALLGWSQGTFASELKVDGNELAVTREID
GGLETIALGLPAVVSCDLRLNQPRYASLPNIMKAKRKPLEVIEISELNVNITPRIKAIKYTLPASRSAGVMVDDVAELLS
KLREEARVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=55.952380952381, Blast_Score=280, Evalue=1e-75,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=56.1181434599156, Blast_Score=260, Evalue=8e-70,
Organism=Escherichia coli, GI87081682, Length=216, Percent_Identity=28.7037037037037, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI2367123, Length=229, Percent_Identity=25.764192139738, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=55.7312252964427, Blast_Score=263, Evalue=4e-71,
Organism=Saccharomyces cerevisiae, GI6321646, Length=251, Percent_Identity=46.2151394422311, Blast_Score=223, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=53.3864541832669, Blast_Score=242, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=53.3864541832669, Blast_Score=242, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26966; Mature: 26966

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPIKRVVDHNVKVRIKSDGSGVDFNNVKMSINPFDEIAIEEAVRLKEAGIATEVIA
CEEEEEHHHHHCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHH
VSCGAKVCQETLRTALAVGADRAIQVDTDAELEPLAVAKTLKEIVKREAPQLVICGKQAI
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHC
DDDCNQTGQMLSALLGWSQGTFASELKVDGNELAVTREIDGGLETIALGLPAVVSCDLRL
CHHHHHHHHHHHHHHCCCCCCCHHHEEECCCEEEEEEECCCCHHHHHHCCCCEEEECEEE
NQPRYASLPNIMKAKRKPLEVIEISELNVNITPRIKAIKYTLPASRSAGVMVDDVAELLS
CCCCCCCCCHHHHHCCCCCEEEEEEECCEEECCCEEEEEEECCCCCCCCEEHHHHHHHHH
KLREEARVL
HHHHHHCCC
>Mature Secondary Structure
MKILVPIKRVVDHNVKVRIKSDGSGVDFNNVKMSINPFDEIAIEEAVRLKEAGIATEVIA
CEEEEEHHHHHCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHH
VSCGAKVCQETLRTALAVGADRAIQVDTDAELEPLAVAKTLKEIVKREAPQLVICGKQAI
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHC
DDDCNQTGQMLSALLGWSQGTFASELKVDGNELAVTREIDGGLETIALGLPAVVSCDLRL
CHHHHHHHHHHHHHHCCCCCCCHHHEEECCCEEEEEEECCCCHHHHHHCCCCEEEECEEE
NQPRYASLPNIMKAKRKPLEVIEISELNVNITPRIKAIKYTLPASRSAGVMVDDVAELLS
CCCCCCCCCHHHHHCCCCCEEEEEEECCEEECCCEEEEEEECCCCCCCCEEHHHHHHHHH
KLREEARVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]