| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is nemA [H]
Identifier: 167624028
GI number: 167624028
Start: 2536378
End: 2537481
Strand: Direct
Name: nemA [H]
Synonym: Shal_2104
Alternate gene names: 167624028
Gene position: 2536378-2537481 (Clockwise)
Preceding gene: 167624027
Following gene: 167624029
Centisome position: 48.53
GC content: 43.93
Gene sequence:
>1104_bases ATGATAAATAACCAATGTATACAAGCCAAACAAAAATTACTTAGCCCATTGAAGCTAGGTGAGATAATCCTCAATAATCG CGTTGTTATGGCGCCAATGACTCGAAATCGAGCTAACAGTGACGGTACACCCACTCAAAGTATGGTTCAACATTATGCGG ATAGAGCATCTGCGGGGTTAATTGTTGCTGAAGGGACCTGGCCTAGCCATTCTGGCCAAGCATATAGTAGGCAGCCAGGT ATTGAGACCAAAGCGCATTGTCAGGCGTGGCGCCATGTCACTGATGCTGTGCATGCTAAAGGTGGCAAAATCGTGTTGCA AATAATGCACAGTGGACGGATTGGCAGTAAGCACATAAAAGGTGAAGCGGTTAACAGTGTCGCGCCTTCTGCAATACAAG CCGCAGGACAAGTTTATACCGACAGCGCAGGCATGCAAGACTTTGATATGCCGCTAGCCCTCAGCTCTGTTCAGATTGCA AAAGTTATAGCTGAGCATCGACAAGCTGCAATCAATGCCATTGAGGCGGGTTTTGATGGAGTAGAACTTCACTGCACTAG CGGTTATTTACCCATGCAGTTTCTATGTTCCGGAACGAACCAGCGTACTGATAAATATGGCGGTAGTAGCGATAAACGTG CAAGTTTTGCTTACGAATGTTTATTAAGTATGAGTGATGCCATAGGCGCAGGGCGTGTTGGCTTAAGAATTAATCCGGGA AATAGCTTTAACGATTGTTCTGATGACGATCCAGCACAAAGCCATATCAGTTTACTAAAGCAAGTTAAAAGCTTAAACCT TGCGTATTTACATGTGATGAAATCACCGTTAACTGACATTGATGCATTTGCGCTAGCGCGTGAGCATTTTAACGGACCGC TAATTTTAAACGACGGCTTTGAACCTAGCAGTGCTGCACAAGCGGTACAAGATGAGCAAGGTCAAGCGGTGTCTTTTGCC AGACATTTTATTGCCAACCCTGATTTAGTTTACCGAATTAATGATGACCTACCGTTATCAAAATTTGATCGGAAAAGCTT ATATACCGCGGGAGATGCAGGCTACAACGATTATCAATCTCATCAAATAATAACCACTAGTTAA
Upstream 100 bases:
>100_bases TTTTTGGCGAGTGATGATGCTTCATATGTTACAGGCGTGAGCTTACCCGTTGATGGTGGTCGCTCGGCAGTACTCGTAAC GGCCTTGGATTGAGGTAGCA
Downstream 100 bases:
>100_bases AAGCAACATATTAAAGGAATAAATAATGAAAATACTGGTACCTATAAAACGAGTGGTCGATCATAACGTAAAAGTTCGTA TCAAATCTGATGGCAGTGGT
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MINNQCIQAKQKLLSPLKLGEIILNNRVVMAPMTRNRANSDGTPTQSMVQHYADRASAGLIVAEGTWPSHSGQAYSRQPG IETKAHCQAWRHVTDAVHAKGGKIVLQIMHSGRIGSKHIKGEAVNSVAPSAIQAAGQVYTDSAGMQDFDMPLALSSVQIA KVIAEHRQAAINAIEAGFDGVELHCTSGYLPMQFLCSGTNQRTDKYGGSSDKRASFAYECLLSMSDAIGAGRVGLRINPG NSFNDCSDDDPAQSHISLLKQVKSLNLAYLHVMKSPLTDIDAFALAREHFNGPLILNDGFEPSSAAQAVQDEQGQAVSFA RHFIANPDLVYRINDDLPLSKFDRKSLYTAGDAGYNDYQSHQIITTS
Sequences:
>Translated_367_residues MINNQCIQAKQKLLSPLKLGEIILNNRVVMAPMTRNRANSDGTPTQSMVQHYADRASAGLIVAEGTWPSHSGQAYSRQPG IETKAHCQAWRHVTDAVHAKGGKIVLQIMHSGRIGSKHIKGEAVNSVAPSAIQAAGQVYTDSAGMQDFDMPLALSSVQIA KVIAEHRQAAINAIEAGFDGVELHCTSGYLPMQFLCSGTNQRTDKYGGSSDKRASFAYECLLSMSDAIGAGRVGLRINPG NSFNDCSDDDPAQSHISLLKQVKSLNLAYLHVMKSPLTDIDAFALAREHFNGPLILNDGFEPSSAAQAVQDEQGQAVSFA RHFIANPDLVYRINDDLPLSKFDRKSLYTAGDAGYNDYQSHQIITTS >Mature_367_residues MINNQCIQAKQKLLSPLKLGEIILNNRVVMAPMTRNRANSDGTPTQSMVQHYADRASAGLIVAEGTWPSHSGQAYSRQPG IETKAHCQAWRHVTDAVHAKGGKIVLQIMHSGRIGSKHIKGEAVNSVAPSAIQAAGQVYTDSAGMQDFDMPLALSSVQIA KVIAEHRQAAINAIEAGFDGVELHCTSGYLPMQFLCSGTNQRTDKYGGSSDKRASFAYECLLSMSDAIGAGRVGLRINPG NSFNDCSDDDPAQSHISLLKQVKSLNLAYLHVMKSPLTDIDAFALAREHFNGPLILNDGFEPSSAAQAVQDEQGQAVSFA RHFIANPDLVYRINDDLPLSKFDRKSLYTAGDAGYNDYQSHQIITTS
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=366, Percent_Identity=37.1584699453552, Blast_Score=223, Evalue=1e-59, Organism=Escherichia coli, GI1789463, Length=221, Percent_Identity=35.7466063348416, Blast_Score=108, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17565138, Length=357, Percent_Identity=27.4509803921569, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17559802, Length=353, Percent_Identity=26.628895184136, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17559804, Length=251, Percent_Identity=26.6932270916335, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI72001454, Length=254, Percent_Identity=27.9527559055118, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17564188, Length=251, Percent_Identity=26.2948207171315, Blast_Score=68, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6325086, Length=383, Percent_Identity=31.331592689295, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321973, Length=380, Percent_Identity=31.3157894736842, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39700; Mature: 39700
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNQCIQAKQKLLSPLKLGEIILNNRVVMAPMTRNRANSDGTPTQSMVQHYADRASAGL CCCCHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCE IVAEGTWPSHSGQAYSRQPGIETKAHCQAWRHVTDAVHAKGGKIVLQIMHSGRIGSKHIK EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC GEAVNSVAPSAIQAAGQVYTDSAGMQDFDMPLALSSVQIAKVIAEHRQAAINAIEAGFDG CCHHHHCCCHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VELHCTSGYLPMQFLCSGTNQRTDKYGGSSDKRASFAYECLLSMSDAIGAGRVGLRINPG EEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC NSFNDCSDDDPAQSHISLLKQVKSLNLAYLHVMKSPLTDIDAFALAREHFNGPLILNDGF CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCC EPSSAAQAVQDEQGQAVSFARHFIANPDLVYRINDDLPLSKFDRKSLYTAGDAGYNDYQS CCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHCHHHHEECCCCCCCCCCC HQIITTS CEEEECC >Mature Secondary Structure MINNQCIQAKQKLLSPLKLGEIILNNRVVMAPMTRNRANSDGTPTQSMVQHYADRASAGL CCCCHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCE IVAEGTWPSHSGQAYSRQPGIETKAHCQAWRHVTDAVHAKGGKIVLQIMHSGRIGSKHIK EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC GEAVNSVAPSAIQAAGQVYTDSAGMQDFDMPLALSSVQIAKVIAEHRQAAINAIEAGFDG CCHHHHCCCHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VELHCTSGYLPMQFLCSGTNQRTDKYGGSSDKRASFAYECLLSMSDAIGAGRVGLRINPG EEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC NSFNDCSDDDPAQSHISLLKQVKSLNLAYLHVMKSPLTDIDAFALAREHFNGPLILNDGF CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCC EPSSAAQAVQDEQGQAVSFARHFIANPDLVYRINDDLPLSKFDRKSLYTAGDAGYNDYQS CCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHCHHHHEECCCCCCCCCCC HQIITTS CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]