| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623999
Identifier: 167623999
GI number: 167623999
Start: 2498439
End: 2498765
Strand: Direct
Name: 167623999
Synonym: Shal_2073
Alternate gene names: NA
Gene position: 2498439-2498765 (Clockwise)
Preceding gene: 167623998
Following gene: 167624002
Centisome position: 47.8
GC content: 37.0
Gene sequence:
>327_bases ATGCCTATTTGTGCTACTTTTAGTACTTACTTTTTTGCTATGGAGGAAATGGTGAAGTCCACAGTAGACAAAATGTTAGT TAAGCACGATAAGCTAGTACATTCAGAAGATGTGAAAGTCTGTTCACACACACAAAGAGCTAAAGATGATTGGGTGTTAC ACACAGTGATGATTGATAACTGTGATACGCCTTTTACCTTTAGAAGAACCAAAAAGTATAAAAGTTTATGTGGTGCTCGC GTAAACATGACCTATTATCCGGATAAACAGGGCGTAGCTGGCTTTGAAATGGATATCTTTAAAGTTGTGAGAATCAAACG CAGTTAA
Upstream 100 bases:
>100_bases GATAAGTTTCCTTTCACTAATTTTGGTGTGTTGGACAATGGGGGCTACTATCAATATTGCTGGATAAGAGACCGTTATTT TTAGCAAATTTTTTACTCAA
Downstream 100 bases:
>100_bases CCAGATAGCTTGCCTTGTTGTTAATACATCATTGTTGATAAAAAACCGTTAAGGCATCGTACAGCGTTAAAACGCTACTA TTCATCCCACTAGCCTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPICATFSTYFFAMEEMVKSTVDKMLVKHDKLVHSEDVKVCSHTQRAKDDWVLHTVMIDNCDTPFTFRRTKKYKSLCGAR VNMTYYPDKQGVAGFEMDIFKVVRIKRS
Sequences:
>Translated_108_residues MPICATFSTYFFAMEEMVKSTVDKMLVKHDKLVHSEDVKVCSHTQRAKDDWVLHTVMIDNCDTPFTFRRTKKYKSLCGAR VNMTYYPDKQGVAGFEMDIFKVVRIKRS >Mature_107_residues PICATFSTYFFAMEEMVKSTVDKMLVKHDKLVHSEDVKVCSHTQRAKDDWVLHTVMIDNCDTPFTFRRTKKYKSLCGARV NMTYYPDKQGVAGFEMDIFKVVRIKRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12624; Mature: 12493
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPICATFSTYFFAMEEMVKSTVDKMLVKHDKLVHSEDVKVCSHTQRAKDDWVLHTVMIDN CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEECC CDTPFTFRRTKKYKSLCGARVNMTYYPDKQGVAGFEMDIFKVVRIKRS CCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure PICATFSTYFFAMEEMVKSTVDKMLVKHDKLVHSEDVKVCSHTQRAKDDWVLHTVMIDN CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEECC CDTPFTFRRTKKYKSLCGARVNMTYYPDKQGVAGFEMDIFKVVRIKRS CCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA