| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is zwf [H]
Identifier: 167623879
GI number: 167623879
Start: 2342777
End: 2344249
Strand: Direct
Name: zwf [H]
Synonym: Shal_1949
Alternate gene names: 167623879
Gene position: 2342777-2344249 (Clockwise)
Preceding gene: 167623876
Following gene: 167623880
Centisome position: 44.82
GC content: 45.96
Gene sequence:
>1473_bases ATGGGCATAACGACACCAAAAGCCAAAGCTTGTGATTTTGTTCTATTTGGTACCAAGGGAGATCTTGCCAAGCGTAAGTT ACTTCCTTCTTTATACCAACTTGATAAAGCAAACTTACTGAATGTCGATACGAAGATCCTCGGCGTTGCAAAAGATGACT TTAGTCAGGAAGAATATCGCGAGTTAGTCATCACCGCATTAAACACCTTTGTTAAAGATGAACTCTGTGAAGAGACAGTG AATCGCTTCTTGGACCGTTGTCACTATATCGGAACAAACTTCACGGTTTCTGATGGTTACCAAGCTTTCCATGATATTTT AGAGCCCGAGAAGCGGGTCATGGTGAGTTACTTCGCGACGCCGCCAGCCATCTTCGGCGATATTTGTCGTTGCCTCCACG AACAAAATCTTATCTTCCCTGACTCTCGTGTTGTTTTAGAAAAGCCAATCGGCTCCGATCTCGAAAGCTCTCGCATCATT AACGACCAAGTCTCAGCTTATTTCGAAGAAAACCAAGTCTATCGCATCGACCATTACCTAGGTAAAGAGACGGTACAGAA TTTACTTGCACTGCGTTTTGCTAACTCTTTATTTGCCTCTAAGTGGGATAACCGTACTATTGACCATGTGCAACTCACCG TTGCTGAAGAAGTGGGTATCGAAGGCCGTTGGGGTTATTTCGATAAAGCGGGTCAGATGCGCGATATGATCCAAAACCAC TTGCTACAGGTATTAACCCTTGTGGCGATGGATCCTCCCGTTAACTTAGATGCTGACAACATCCGTGATGAAAAAGTAAA AGTACTTAAGTCACTGCGTCCAATTAACGCCGACAACATCTATGAGAACACGGTTCGTGGCCAATATAGTTCAGGCTTCC TTAAAGGCGCACCGGTTCCTGGTTATCTCGAAGAAGAGGGTGCGAACGTTCAGTCTAAGGCTGAAACTTTTGTTGCACTT CGCGTCGATATCGATAACTGGCGTTGGGCTGGCGTGCCATTCTACTTACGTAGTGGTAAGCGTATGCCGTTTAAGAGCTC AGAAATTGTGGTCTATTTTAAGAACCCACCGCACAACCTATACAGCTCGAACTACCGTAACCTGCCACCAAACAAATTGA CGATTCGATTACAGCCTCATGAAGGGGTTGAAATCCAGATGCTTAACAAGGTGCCAGGTCTTGGTGAAAAGCAACGCTTG CAAACCACTAAACTGGATTTAAGCTTCTCTGAGACCTTCAAAAACGAACGTATTGCCGATGCCTACGAGCGTTTATTACT TGAAGCTATGCTTGGCAATCAGGCGTTATTTGTGCGCCGTGATGAAGTTGAGCAAGCTTGGAGCTGGGTAGACGGCATTA TTCAGGCGTGGGAAGAGACCGACGAAAAGCCAAAGCCTTACCCTGCGGGTACATGGGGACCTGTGGCGTCTGTCGCGCTT ATCACTAAAGATGGCCGTTCTTGGGACGAGTAA
Upstream 100 bases:
>100_bases ATTTAGATGCAATTACTGATTTCTGTTGTTATATTACAACAAACGTGTGAATTCTCGTCAAACATGATGAGGCACAGTGT CAAAAGGAGATTTTGAAGCT
Downstream 100 bases:
>100_bases GGTGAAACCGATGATTAAAGAAACTGTTTTCAAATCATTTGACAATAAAGAAGCACTCGAAGCACAACTGGCGGAGCGTA TTGCCAATCAACTGCAAGAC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MGITTPKAKACDFVLFGTKGDLAKRKLLPSLYQLDKANLLNVDTKILGVAKDDFSQEEYRELVITALNTFVKDELCEETV NRFLDRCHYIGTNFTVSDGYQAFHDILEPEKRVMVSYFATPPAIFGDICRCLHEQNLIFPDSRVVLEKPIGSDLESSRII NDQVSAYFEENQVYRIDHYLGKETVQNLLALRFANSLFASKWDNRTIDHVQLTVAEEVGIEGRWGYFDKAGQMRDMIQNH LLQVLTLVAMDPPVNLDADNIRDEKVKVLKSLRPINADNIYENTVRGQYSSGFLKGAPVPGYLEEEGANVQSKAETFVAL RVDIDNWRWAGVPFYLRSGKRMPFKSSEIVVYFKNPPHNLYSSNYRNLPPNKLTIRLQPHEGVEIQMLNKVPGLGEKQRL QTTKLDLSFSETFKNERIADAYERLLLEAMLGNQALFVRRDEVEQAWSWVDGIIQAWEETDEKPKPYPAGTWGPVASVAL ITKDGRSWDE
Sequences:
>Translated_490_residues MGITTPKAKACDFVLFGTKGDLAKRKLLPSLYQLDKANLLNVDTKILGVAKDDFSQEEYRELVITALNTFVKDELCEETV NRFLDRCHYIGTNFTVSDGYQAFHDILEPEKRVMVSYFATPPAIFGDICRCLHEQNLIFPDSRVVLEKPIGSDLESSRII NDQVSAYFEENQVYRIDHYLGKETVQNLLALRFANSLFASKWDNRTIDHVQLTVAEEVGIEGRWGYFDKAGQMRDMIQNH LLQVLTLVAMDPPVNLDADNIRDEKVKVLKSLRPINADNIYENTVRGQYSSGFLKGAPVPGYLEEEGANVQSKAETFVAL RVDIDNWRWAGVPFYLRSGKRMPFKSSEIVVYFKNPPHNLYSSNYRNLPPNKLTIRLQPHEGVEIQMLNKVPGLGEKQRL QTTKLDLSFSETFKNERIADAYERLLLEAMLGNQALFVRRDEVEQAWSWVDGIIQAWEETDEKPKPYPAGTWGPVASVAL ITKDGRSWDE >Mature_489_residues GITTPKAKACDFVLFGTKGDLAKRKLLPSLYQLDKANLLNVDTKILGVAKDDFSQEEYRELVITALNTFVKDELCEETVN RFLDRCHYIGTNFTVSDGYQAFHDILEPEKRVMVSYFATPPAIFGDICRCLHEQNLIFPDSRVVLEKPIGSDLESSRIIN DQVSAYFEENQVYRIDHYLGKETVQNLLALRFANSLFASKWDNRTIDHVQLTVAEEVGIEGRWGYFDKAGQMRDMIQNHL LQVLTLVAMDPPVNLDADNIRDEKVKVLKSLRPINADNIYENTVRGQYSSGFLKGAPVPGYLEEEGANVQSKAETFVALR VDIDNWRWAGVPFYLRSGKRMPFKSSEIVVYFKNPPHNLYSSNYRNLPPNKLTIRLQPHEGVEIQMLNKVPGLGEKQRLQ TTKLDLSFSETFKNERIADAYERLLLEAMLGNQALFVRRDEVEQAWSWVDGIIQAWEETDEKPKPYPAGTWGPVASVALI TKDGRSWDE
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=483, Percent_Identity=35.4037267080745, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI109389365, Length=483, Percent_Identity=35.4037267080745, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI52145310, Length=509, Percent_Identity=27.7013752455796, Blast_Score=164, Evalue=2e-40, Organism=Escherichia coli, GI1788158, Length=491, Percent_Identity=64.7657841140529, Blast_Score=655, Evalue=0.0, Organism=Caenorhabditis elegans, GI17538218, Length=485, Percent_Identity=37.9381443298969, Blast_Score=327, Evalue=9e-90, Organism=Saccharomyces cerevisiae, GI6324088, Length=473, Percent_Identity=36.7864693446089, Blast_Score=300, Evalue=2e-82, Organism=Drosophila melanogaster, GI24643350, Length=470, Percent_Identity=35.7446808510638, Blast_Score=298, Evalue=7e-81, Organism=Drosophila melanogaster, GI24643352, Length=470, Percent_Identity=35.7446808510638, Blast_Score=298, Evalue=8e-81, Organism=Drosophila melanogaster, GI221513548, Length=488, Percent_Identity=26.844262295082, Blast_Score=183, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 55942; Mature: 55811
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITTPKAKACDFVLFGTKGDLAKRKLLPSLYQLDKANLLNVDTKILGVAKDDFSQEEYR CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHH ELVITALNTFVKDELCEETVNRFLDRCHYIGTNFTVSDGYQAFHDILEPEKRVMVSYFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCHHHHEEEHHHCC PPAIFGDICRCLHEQNLIFPDSRVVLEKPIGSDLESSRIINDQVSAYFEENQVYRIDHYL CHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHH GKETVQNLLALRFANSLFASKWDNRTIDHVQLTVAEEVGIEGRWGYFDKAGQMRDMIQNH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHH LLQVLTLVAMDPPVNLDADNIRDEKVKVLKSLRPINADNIYENTVRGQYSSGFLKGAPVP HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC GYLEEEGANVQSKAETFVALRVDIDNWRWAGVPFYLRSGKRMPFKSSEIVVYFKNPPHNL CCHHCCCCCCHHCCCEEEEEEEECCCCEECCCCCEECCCCCCCCCCCCEEEEECCCCCCH YSSNYRNLPPNKLTIRLQPHEGVEIQMLNKVPGLGEKQRLQTTKLDLSFSETFKNERIAD HCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHEECCCHHHHHCCCHHHH AYERLLLEAMLGNQALFVRRDEVEQAWSWVDGIIQAWEETDEKPKPYPAGTWGPVASVAL HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEE ITKDGRSWDE EEECCCCCCC >Mature Secondary Structure GITTPKAKACDFVLFGTKGDLAKRKLLPSLYQLDKANLLNVDTKILGVAKDDFSQEEYR CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHH ELVITALNTFVKDELCEETVNRFLDRCHYIGTNFTVSDGYQAFHDILEPEKRVMVSYFAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCHHHHEEEHHHCC PPAIFGDICRCLHEQNLIFPDSRVVLEKPIGSDLESSRIINDQVSAYFEENQVYRIDHYL CHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHH GKETVQNLLALRFANSLFASKWDNRTIDHVQLTVAEEVGIEGRWGYFDKAGQMRDMIQNH CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHH LLQVLTLVAMDPPVNLDADNIRDEKVKVLKSLRPINADNIYENTVRGQYSSGFLKGAPVP HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC GYLEEEGANVQSKAETFVALRVDIDNWRWAGVPFYLRSGKRMPFKSSEIVVYFKNPPHNL CCHHCCCCCCHHCCCEEEEEEEECCCCEECCCCCEECCCCCCCCCCCCEEEEECCCCCCH YSSNYRNLPPNKLTIRLQPHEGVEIQMLNKVPGLGEKQRLQTTKLDLSFSETFKNERIAD HCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHEECCCHHHHHCCCHHHH AYERLLLEAMLGNQALFVRRDEVEQAWSWVDGIIQAWEETDEKPKPYPAGTWGPVASVAL HHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEE ITKDGRSWDE EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8145647 [H]