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The map label for this gene is uidR [C]

Identifier: 167623875

GI number: 167623875

Start: 2336584

End: 2337246

Strand: Direct

Name: uidR [C]

Synonym: Shal_1945

Alternate gene names: 167623875

Gene position: 2336584-2337246 (Clockwise)

Preceding gene: 167623873

Following gene: 167623876

Centisome position: 44.7

GC content: 44.19

Gene sequence:

>663_bases
ATGAAAGGCAACGGAATGGCGAATCGCTCCGATACAAAAACAAGAATACTTGATGCTGCGGAAAAATTATTTGCAGAAAG
GGGTTTTTCAGAAACCTCGCTAAGATTAATTACCAGCAAAGCTGAAGTAAACCTTGCATCTGTTAATTACCATTTTGGCT
CCAAAAAAGAGCTGATCCGAGCGGTGCTAGCACGTTACCTCGATGTATTTATGCCTGCAGCAGCAGACGCAATTGTTGCG
GTGCGCAAAAATAACGCTAACGCATCATTAGACGATATTTTCTCAACTTTAGTTGCACCGCTTCTCGAACTCAATACATT
GAGAAATGAAGGCACCACCACATTTCTTCAGCTGTTGGGGCGTGGCTATATCGAAAGCCAAGGGCACCTTCGTTGGTTTA
TCACCACGCATTATGGCGAGTACCTAGGGCTTTTTGTTAAGGCTGTGGCTGAGAGCGCTCCACATATTCCTCCCGCAGAG
ATGTTTTGGCGATTACACTTTACCTTAGGTACGGTTGTTTTCACTATGGCGTCAGCCGATGCGCTAACAGAAATTGCAGA
AGCTGATTTTGGGGAGCACAATGATATAGAAGCTGTTATTAGAAAAGTCATTCCGTATTTATCTGCCGGGGTATCGGTCC
CACTTACTAAGGATGTAATGTAA

Upstream 100 bases:

>100_bases
TTTGACTGGTGTGGTTTCAGCTTCTGTTTTAGCAATTAGGGGGAATTTGTTTGACAAAAAGCAAGCGAATGTTTAATTTA
AACGAGTGTTTAAAATAGAA

Downstream 100 bases:

>100_bases
AAATTATGGCTACGACATTATTAATACTATTGATTGGCACAATAGTGGTTGTATTCAGTGTTAAAAATATCAGGATGCAA
CTCGTTACCCGCCCTGTATT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator PsrA; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcription Regulator Protein; PsrA Protein; TetR Family Transcription Factor; TRANSCRIPTIONal REGULATOR TetR Family; Regulatory Protein Tetr; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKGNGMANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFMPAAADAIVA
VRKNNANASLDDIFSTLVAPLLELNTLRNEGTTTFLQLLGRGYIESQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAE
MFWRLHFTLGTVVFTMASADALTEIAEADFGEHNDIEAVIRKVIPYLSAGVSVPLTKDVM

Sequences:

>Translated_220_residues
MKGNGMANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFMPAAADAIVA
VRKNNANASLDDIFSTLVAPLLELNTLRNEGTTTFLQLLGRGYIESQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAE
MFWRLHFTLGTVVFTMASADALTEIAEADFGEHNDIEAVIRKVIPYLSAGVSVPLTKDVM
>Mature_220_residues
MKGNGMANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLDVFMPAAADAIVA
VRKNNANASLDDIFSTLVAPLLELNTLRNEGTTTFLQLLGRGYIESQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAE
MFWRLHFTLGTVVFTMASADALTEIAEADFGEHNDIEAVIRKVIPYLSAGVSVPLTKDVM

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24250; Mature: 24250

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGNGMANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIR
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEEEHHCCEEEEEEEECCCCHHHHHH
AVLARYLDVFMPAAADAIVAVRKNNANASLDDIFSTLVAPLLELNTLRNEGTTTFLQLLG
HHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RGYIESQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAEMFWRLHFTLGTVVFTMASAD
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALTEIAEADFGEHNDIEAVIRKVIPYLSAGVSVPLTKDVM
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKGNGMANRSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIR
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHEEEHHCCEEEEEEEECCCCHHHHHH
AVLARYLDVFMPAAADAIVAVRKNNANASLDDIFSTLVAPLLELNTLRNEGTTTFLQLLG
HHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RGYIESQGHLRWFITTHYGEYLGLFVKAVAESAPHIPPAEMFWRLHFTLGTVVFTMASAD
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALTEIAEADFGEHNDIEAVIRKVIPYLSAGVSVPLTKDVM
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA