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The map label for this gene is cmoB

Identifier: 167623845

GI number: 167623845

Start: 2300046

End: 2301038

Strand: Reverse

Name: cmoB

Synonym: Shal_1915

Alternate gene names: 167623845

Gene position: 2301038-2300046 (Counterclockwise)

Preceding gene: 167623846

Following gene: 167623844

Centisome position: 44.02

GC content: 43.71

Gene sequence:

>993_bases
GTGATTAGTTTTAGCTCTTTCTATAAACAAATTTCAGACTCAAGCCTTCAACATTGGCTTGAGACCCTTCCGTCAATTCT
CGGCCAATGGCAGAGAGAGCATAAGCACGGCTCACTGCCTAAGTGGGAAAAAGTACTCAATAAACTGCATTACCCAGAAG
CAGACATCATCGACTTTAAAACCAGCGTAAAAATTGGCTCTGGTGATCAGCTCAGCGACGGAGAAAGGCAGAAGCTTGAA
AATCTATTAGCTATTTTCAAGCCTTGGCGCAAGGGGCCTTATTCTCTGCATGGTATCGAAATCGATACCGAGTGGCGCTC
AGATTGGAAATGGGAACGTGTCGTCCCGCATATCTCTCCACTTGAAAATCGAACCGTATTAGATGTCGGTTGCGGCAGTG
GTTACCATATGTGGCGCATGCTAGGCGAAGGGGCTAAACACGTTGTCGGTATCGACCCATCTCCACTATTTATGTGCCAA
TTTGAAGCAGTAAAGCGACTTGCTGGCAATGAGCAACCTATTCACTTCTTACCACTGGGTATTGAAGAGTTACCAGCATT
AGATGCATTTGATACCGTATTCTCTATGGGCGTTCTATATCATCGCCGCTCACCGATTGATCATATATTTCAATTACGAG
ACCAGCTACGTGTTGGTGGTGAGTTGGTACTTGAAACCTTAGTTATCGATGGCGATGAAAATACCGTACTCATGCCAACA
GATAGATATGGCAAGATGAATAATGTGTGGTTCTTGCCTTCAGTTGAAATGCTTATGCTTTGGTTAAAGAAGTGTGATTT
CACAGACATACGTTGTGTCGATGTTGATGTTACTTCACTTGCAGAGCAAAGAAGTACGCCATGGATGCCAAATGAATCAT
TAGTAGATTATTTGGATCCTAATGATGTTAGCCTAACGGTTGAGGGCTATCCTGCGCCAAAACGAGCCACGATTATCGCC
ACCAAGAATCAGCCAAATAAAGATTTAATCTAG

Upstream 100 bases:

>100_bases
ATACACTAGCCGAACATGAAAATCGGATTAGATCACTGGGTTTTAGCCAGTTCAGCGTTTGGTTCCAATGTTTTAATTTT
GCATCTATGGTGGCAATTAA

Downstream 100 bases:

>100_bases
CAAATAGTAAATGGGAAGCACTATGTTCAAGCAGATAATTTGTATTGCCGCAATCGCGGCCGCCATTTCAGGTTGTGCAA
CGACCAAAGAAACCAACGCA

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MISFSSFYKQISDSSLQHWLETLPSILGQWQREHKHGSLPKWEKVLNKLHYPEADIIDFKTSVKIGSGDQLSDGERQKLE
NLLAIFKPWRKGPYSLHGIEIDTEWRSDWKWERVVPHISPLENRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQ
FEAVKRLAGNEQPIHFLPLGIEELPALDAFDTVFSMGVLYHRRSPIDHIFQLRDQLRVGGELVLETLVIDGDENTVLMPT
DRYGKMNNVWFLPSVEMLMLWLKKCDFTDIRCVDVDVTSLAEQRSTPWMPNESLVDYLDPNDVSLTVEGYPAPKRATIIA
TKNQPNKDLI

Sequences:

>Translated_330_residues
MISFSSFYKQISDSSLQHWLETLPSILGQWQREHKHGSLPKWEKVLNKLHYPEADIIDFKTSVKIGSGDQLSDGERQKLE
NLLAIFKPWRKGPYSLHGIEIDTEWRSDWKWERVVPHISPLENRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQ
FEAVKRLAGNEQPIHFLPLGIEELPALDAFDTVFSMGVLYHRRSPIDHIFQLRDQLRVGGELVLETLVIDGDENTVLMPT
DRYGKMNNVWFLPSVEMLMLWLKKCDFTDIRCVDVDVTSLAEQRSTPWMPNESLVDYLDPNDVSLTVEGYPAPKRATIIA
TKNQPNKDLI
>Mature_330_residues
MISFSSFYKQISDSSLQHWLETLPSILGQWQREHKHGSLPKWEKVLNKLHYPEADIIDFKTSVKIGSGDQLSDGERQKLE
NLLAIFKPWRKGPYSLHGIEIDTEWRSDWKWERVVPHISPLENRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQ
FEAVKRLAGNEQPIHFLPLGIEELPALDAFDTVFSMGVLYHRRSPIDHIFQLRDQLRVGGELVLETLVIDGDENTVLMPT
DRYGKMNNVWFLPSVEMLMLWLKKCDFTDIRCVDVDVTSLAEQRSTPWMPNESLVDYLDPNDVSLTVEGYPAPKRATIIA
TKNQPNKDLI

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=322, Percent_Identity=61.1801242236025, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_SHEHH (B0TSA0)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001674139.1
- ProteinModelPortal:   B0TSA0
- GeneID:   5905029
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_1915
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- ProtClustDB:   PRK15068
- BioCyc:   SHAL458817:SHAL_1915-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 37869; Mature: 37869

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFSSFYKQISDSSLQHWLETLPSILGQWQREHKHGSLPKWEKVLNKLHYPEADIIDFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEE
TSVKIGSGDQLSDGERQKLENLLAIFKPWRKGPYSLHGIEIDTEWRSDWKWERVVPHISP
EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHCCCCCC
LENRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQFEAVKRLAGNEQPIHFLPLG
CCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEECC
IEELPALDAFDTVFSMGVLYHRRSPIDHIFQLRDQLRVGGELVLETLVIDGDENTVLMPT
HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEEEEEEEECCCCEEEEEC
DRYGKMNNVWFLPSVEMLMLWLKKCDFTDIRCVDVDVTSLAEQRSTPWMPNESLVDYLDP
CCCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHCCCC
NDVSLTVEGYPAPKRATIIATKNQPNKDLI
CCEEEEEECCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MISFSSFYKQISDSSLQHWLETLPSILGQWQREHKHGSLPKWEKVLNKLHYPEADIIDFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEE
TSVKIGSGDQLSDGERQKLENLLAIFKPWRKGPYSLHGIEIDTEWRSDWKWERVVPHISP
EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHCCCCCC
LENRTVLDVGCGSGYHMWRMLGEGAKHVVGIDPSPLFMCQFEAVKRLAGNEQPIHFLPLG
CCCCEEEEECCCCCHHHHHHHHCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEECC
IEELPALDAFDTVFSMGVLYHRRSPIDHIFQLRDQLRVGGELVLETLVIDGDENTVLMPT
HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEEEEEEEECCCCEEEEEC
DRYGKMNNVWFLPSVEMLMLWLKKCDFTDIRCVDVDVTSLAEQRSTPWMPNESLVDYLDP
CCCCCCCCEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHCCCC
NDVSLTVEGYPAPKRATIIATKNQPNKDLI
CCEEEEEECCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA