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The map label for this gene is cmoA

Identifier: 167623846

GI number: 167623846

Start: 2301035

End: 2301766

Strand: Reverse

Name: cmoA

Synonym: Shal_1916

Alternate gene names: 167623846

Gene position: 2301766-2301035 (Counterclockwise)

Preceding gene: 167623854

Following gene: 167623845

Centisome position: 44.04

GC content: 38.93

Gene sequence:

>732_bases
ATGAACTCTTCTACCGATAATCTCTTTGCCAAGCCTTATGAACAAGTCAGCGATTTTCAATTCGACGACAAAGTCGCTGG
TGTCTTTAATGACATGATCAGACGTTCGGTTCCAGGTTATGGCCAAATCATCAATACTATTGGTGATCTCGCCCAAAAAT
ATGCAGCGACCAATACTAAAATTTACGATTTAGGTTGCTCTTTAGGTGCAGCCACCTTAAGCATTCGCCGACGAGTAGAA
GGTCGTAATTGCCAAATCGTCGCGATAGATAATAGCGAGTCTATGATTGAACGCTGCAACGAAAACCTATCGGCTTATGT
TAGTGAAACACCTGTAGAGCTAATTTGCGGGGATATTCGAGATATTAAGATCGAAAATGCATCCTTAGTGGTATTGAATT
TTACCATGCAATTTCTTTCTCCAGATGATCGTGAAAACTTACTTGAAAATATTTACCAGGGCCTTATTCCTGGTGGTTTG
CTCATATTGTCTGAAAAACTTTACTTTAAAGAAGATAAAATCCAATCCACTTTGGATGATTTGCACCTCGATTTTAAAAG
AGCAAATGGTTACAGTGAGTTAGAGATCAGTCAAAAACGCAGTTCATTAGAAAACGTGATGAAACCTGATACACTAGCCG
AACATGAAAATCGGATTAGATCACTGGGTTTTAGCCAGTTCAGCGTTTGGTTCCAATGTTTTAATTTTGCATCTATGGTG
GCAATTAAGTGA

Upstream 100 bases:

>100_bases
GCTATTAGACAAAATTTTATGAGTAAATTCTAGTACTAGTCTTGCTGGTTACAGACATGATTAGCTAGAATGAAGTGTTG
AACTCTCACTATTTGATCAC

Downstream 100 bases:

>100_bases
TTAGTTTTAGCTCTTTCTATAAACAAATTTCAGACTCAAGCCTTCAACATTGGCTTGAGACCCTTCCGTCAATTCTCGGC
CAATGGCAGAGAGAGCATAA

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNSSTDNLFAKPYEQVSDFQFDDKVAGVFNDMIRRSVPGYGQIINTIGDLAQKYAATNTKIYDLGCSLGAATLSIRRRVE
GRNCQIVAIDNSESMIERCNENLSAYVSETPVELICGDIRDIKIENASLVVLNFTMQFLSPDDRENLLENIYQGLIPGGL
LILSEKLYFKEDKIQSTLDDLHLDFKRANGYSELEISQKRSSLENVMKPDTLAEHENRIRSLGFSQFSVWFQCFNFASMV
AIK

Sequences:

>Translated_243_residues
MNSSTDNLFAKPYEQVSDFQFDDKVAGVFNDMIRRSVPGYGQIINTIGDLAQKYAATNTKIYDLGCSLGAATLSIRRRVE
GRNCQIVAIDNSESMIERCNENLSAYVSETPVELICGDIRDIKIENASLVVLNFTMQFLSPDDRENLLENIYQGLIPGGL
LILSEKLYFKEDKIQSTLDDLHLDFKRANGYSELEISQKRSSLENVMKPDTLAEHENRIRSLGFSQFSVWFQCFNFASMV
AIK
>Mature_243_residues
MNSSTDNLFAKPYEQVSDFQFDDKVAGVFNDMIRRSVPGYGQIINTIGDLAQKYAATNTKIYDLGCSLGAATLSIRRRVE
GRNCQIVAIDNSESMIERCNENLSAYVSETPVELICGDIRDIKIENASLVVLNFTMQFLSPDDRENLLENIYQGLIPGGL
LILSEKLYFKEDKIQSTLDDLHLDFKRANGYSELEISQKRSSLENVMKPDTLAEHENRIRSLGFSQFSVWFQCFNFASMV
AIK

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U)

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family

Homologues:

Organism=Escherichia coli, GI1788177, Length=241, Percent_Identity=58.9211618257261, Blast_Score=307, Evalue=5e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOA_SHEHH (B0TSA1)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001674140.1
- ProteinModelPortal:   B0TSA1
- SMR:   B0TSA1
- GeneID:   5905030
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_1916
- HOGENOM:   HBG296860
- OMA:   YSELEVS
- ProtClustDB:   CLSK906731
- BioCyc:   SHAL458817:SHAL_1916-MONOMER
- HAMAP:   MF_01589
- InterPro:   IPR013216
- InterPro:   IPR005271
- PIRSF:   PIRSF006325
- TIGRFAMs:   TIGR00740

Pfam domain/function: PF08241 Methyltransf_11

EC number: NA

Molecular weight: Translated: 27482; Mature: 27482

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: BINDING 40-40 BINDING 90-90 BINDING 133-133 BINDING 200-200

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSTDNLFAKPYEQVSDFQFDDKVAGVFNDMIRRSVPGYGQIINTIGDLAQKYAATNTK
CCCCCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCE
IYDLGCSLGAATLSIRRRVEGRNCQIVAIDNSESMIERCNENLSAYVSETPVELICGDIR
EEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCCC
DIKIENASLVVLNFTMQFLSPDDRENLLENIYQGLIPGGLLILSEKLYFKEDKIQSTLDD
EEEECCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
LHLDFKRANGYSELEISQKRSSLENVMKPDTLAEHENRIRSLGFSQFSVWFQCFNFASMV
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AIK
CCC
>Mature Secondary Structure
MNSSTDNLFAKPYEQVSDFQFDDKVAGVFNDMIRRSVPGYGQIINTIGDLAQKYAATNTK
CCCCCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCE
IYDLGCSLGAATLSIRRRVEGRNCQIVAIDNSESMIERCNENLSAYVSETPVELICGDIR
EEECCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCCC
DIKIENASLVVLNFTMQFLSPDDRENLLENIYQGLIPGGLLILSEKLYFKEDKIQSTLDD
EEEECCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
LHLDFKRANGYSELEISQKRSSLENVMKPDTLAEHENRIRSLGFSQFSVWFQCFNFASMV
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AIK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA