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The map label for this gene is rimK [H]

Identifier: 167623844

GI number: 167623844

Start: 2299268

End: 2300023

Strand: Reverse

Name: rimK [H]

Synonym: Shal_1914

Alternate gene names: 167623844

Gene position: 2300023-2299268 (Counterclockwise)

Preceding gene: 167623845

Following gene: 167623843

Centisome position: 44.0

GC content: 46.3

Gene sequence:

>756_bases
ATGTTCAAGCAGATAATTTGTATTGCCGCAATCGCGGCCGCCATTTCAGGTTGTGCAACGACCAAAGAAACCAACGCACC
GATCCCAGTAGACGCTGCGGTGCTAGAAGCCAGTTTAACAAAGCAAGAAAGCAACATACTTGGTGCAATCGATACCTGTA
ATCAAGCTCAGGCAGCAGGACTTGCCTCGCTAACAACACAAATTGATCTGCTCGATGCCAAAATTGCTCAGCTTGAGGTG
AAAAAAGAGACGGCTATCGTGCCAGTGGTCACGCCTGTACAGTGTCCGCCCTCACCTATTGGCGACAAATTTATGCTAGG
CGCGTTAGAAAATGTGTATGTCGATGAAGTTAAGGCCAGCTTTAATACCCGTATCGATACAGGTGCAGAGTCATCGTCAC
TCGATGCACGCAATATCATTTTATTTGAAAGAGATGGCAGCCAGTGGGTCCGATTTGACGTCTTTACCCAAGGGGATAAA
CAACCTGCAAAAACCTTTGAATCAAAAGTGGAACGCTTTGTGCGGATTAAACAAGAGGCTGGCGAGAAAAACGATCGTCG
TCCTGTCATTCACGCGCACCTTGAAATTGGTCAATATAAAGCGGAAACCGACCTTAACTTAAGCGATCGTAGCCATCTAG
AATACCCATTGCTGCTTGGCCGTAAGTTTATGCAAGACATCGCCGTTGTCGATGTTGGCCAAACCTATATCCATGGAAAA
AAACAAGACGCTCAGCCGTCTAAGACGAAAAAATAG

Upstream 100 bases:

>100_bases
ACGGTTGAGGGCTATCCTGCGCCAAAACGAGCCACGATTATCGCCACCAAGAATCAGCCAAATAAAGATTTAATCTAGCA
AATAGTAAATGGGAAGCACT

Downstream 100 bases:

>100_bases
GATAAATGCAAATGCATTCTAAGAAACCCTTTTACATTTTAGTGGCGTTACTGTTTATTAGCGGTATTGCCGCCAGTGTC
TATCGTGGAATAGAGCACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MFKQIICIAAIAAAISGCATTKETNAPIPVDAAVLEASLTKQESNILGAIDTCNQAQAAGLASLTTQIDLLDAKIAQLEV
KKETAIVPVVTPVQCPPSPIGDKFMLGALENVYVDEVKASFNTRIDTGAESSSLDARNIILFERDGSQWVRFDVFTQGDK
QPAKTFESKVERFVRIKQEAGEKNDRRPVIHAHLEIGQYKAETDLNLSDRSHLEYPLLLGRKFMQDIAVVDVGQTYIHGK
KQDAQPSKTKK

Sequences:

>Translated_251_residues
MFKQIICIAAIAAAISGCATTKETNAPIPVDAAVLEASLTKQESNILGAIDTCNQAQAAGLASLTTQIDLLDAKIAQLEV
KKETAIVPVVTPVQCPPSPIGDKFMLGALENVYVDEVKASFNTRIDTGAESSSLDARNIILFERDGSQWVRFDVFTQGDK
QPAKTFESKVERFVRIKQEAGEKNDRRPVIHAHLEIGQYKAETDLNLSDRSHLEYPLLLGRKFMQDIAVVDVGQTYIHGK
KQDAQPSKTKK
>Mature_251_residues
MFKQIICIAAIAAAISGCATTKETNAPIPVDAAVLEASLTKQESNILGAIDTCNQAQAAGLASLTTQIDLLDAKIAQLEV
KKETAIVPVVTPVQCPPSPIGDKFMLGALENVYVDEVKASFNTRIDTGAESSSLDARNIILFERDGSQWVRFDVFTQGDK
QPAKTFESKVERFVRIKQEAGEKNDRRPVIHAHLEIGQYKAETDLNLSDRSHLEYPLLLGRKFMQDIAVVDVGQTYIHGK
KQDAQPSKTKK

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 27482; Mature: 27482

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKQIICIAAIAAAISGCATTKETNAPIPVDAAVLEASLTKQESNILGAIDTCNQAQAAG
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHCCCHHHHCC
LASLTTQIDLLDAKIAQLEVKKETAIVPVVTPVQCPPSPIGDKFMLGALENVYVDEVKAS
HHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FNTRIDTGAESSSLDARNIILFERDGSQWVRFDVFTQGDKQPAKTFESKVERFVRIKQEA
HCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
GEKNDRRPVIHAHLEIGQYKAETDLNLSDRSHLEYPLLLGRKFMQDIAVVDVGQTYIHGK
CCCCCCCCEEEEEEEECCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCHHHCCCC
KQDAQPSKTKK
CCCCCCCCCCC
>Mature Secondary Structure
MFKQIICIAAIAAAISGCATTKETNAPIPVDAAVLEASLTKQESNILGAIDTCNQAQAAG
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHCCCHHHHCC
LASLTTQIDLLDAKIAQLEVKKETAIVPVVTPVQCPPSPIGDKFMLGALENVYVDEVKAS
HHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FNTRIDTGAESSSLDARNIILFERDGSQWVRFDVFTQGDKQPAKTFESKVERFVRIKQEA
HCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
GEKNDRRPVIHAHLEIGQYKAETDLNLSDRSHLEYPLLLGRKFMQDIAVVDVGQTYIHGK
CCCCCCCCEEEEEEEECCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCHHHCCCC
KQDAQPSKTKK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA