| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is atsA [H]
Identifier: 167623816
GI number: 167623816
Start: 2264544
End: 2266208
Strand: Direct
Name: atsA [H]
Synonym: Shal_1886
Alternate gene names: 167623816
Gene position: 2264544-2266208 (Clockwise)
Preceding gene: 167623814
Following gene: 167623817
Centisome position: 43.32
GC content: 44.38
Gene sequence:
>1665_bases ATGAAACTCAACAAAATCATGTTAACGCTGTTGTCCGTATGTACTATCGCGTCAAATCCAATGATGGCGTACGCGAAAGA TCACAACGAGACTATCGACGCTCAAGAACCCCCCAATATTATCCTCATTGTTGCAGATGACTTAGGTTGGACCGACTTAA GTCGTTATGGCAGCGAAATACAGACACCAAATATTGATCTGATAGCCCATGAAGGTATTCAGTTTACCGACTTTCATGCA TCAGTAAGCTGCTCACCGACCCGCACCATGTTGCTAACTGGCGTGGATAACCATCAAGCGGGTATGGGAAATATGAGTGA GCTATTGACCGAGGCCCAAAGGGGACAGCCTGGCTACGAAGGCTATATAAACAAAGATGTTGTCACTTTGTCTGAGGTAT TAAAGAACAACAATTATAACACTTACATGGCAGGTAAATGGCATTTGGGTCATCAGCAAACAAACTGGCCGTATGCGCGT GGGTTTGAACGCTCATTTAGCACACTTGAAGCCGGGGGGAGTCATTGGTCTGATATGACAGGTTTGTTGGCTGAAATACA GGAAACATCGACGTATGTTCGTGACAACAAGCAATTAACTGAGCTACCAAGAAGTTTTTATTCCACAACGGCCTATACCG ATGAGTTAATGACCTATATCCGAGAAGGTAAGCGCAATAACAAGCCCTTCTTTGGATACTTGGCATTTACAGCACCACAT GATCCTTTGCACGCGCCTGAACCTTGGTTGAGTGAGTATGAAGGGGTTTATGATTCAGGATATGAAGTATTAAAAGCGCA GCGTATCAAAAATAGTAAAAAGCTTGGGCTAATTAGTCAGGACGCCCCAGAGCCAGAGATGCACCCCGTTGTTACGCCAT GGAAGCAGCTCTCCAAAGAGCAAAAAATGATAGAAACTAAAGCGATGGAAACATACGCTGGCATGATCTCCAACATGGAC TACAACGTTGGCCGATTACAGCGTTTTCTGAAAGACATCAATGAATATGATAATACCATTTTTGTTTTCATGAGTGATAA CGGCGCTAACCCATGGTTCTCAGAAGAGTATCCGGGGAACAGAGGCAGTTCATTTTTAGCTCAGTTTGACAATAGCTTAG AAAATATTGGCCAACCGATGTCACATTATGCCTATGGCGCGGGATGGGCTTCTGCAAGCAACGGTCCTTTGGACCGCTTT AAAATGACTGTCAGTGAGGGAGGCATTAGAGTTCCCTTGCTGATCTCTGGCCCAGGCATAAACAAGCGCGATGATATTAA CGGTAGTTTCGCTTATGTGACTGATCTTATGCCAACGCTGCTCGATTATGCCAATGCAAAACATCCTGACACCTTTAATG GGCGTGATGTGATAGATATGCAGGGTAAATCAATGCGCCAAATGCTTGAGGGGAAAAAAGAGTCGGTTCATAGCGACAGT GATGTCACCAGTGGCGAAATGAGGTTTGGCAGATGGACGAGATTAGGAGACTTTAAAGCCGCGATGATCCCAAAGCCATA CGGTGATGGTCAATGGAAATTGTTTAATCTTGTAAACGATCCAGGAGAAACGAACGATCTATCCAAACAGTATCCACAAA AACTGCAGCAACTTACGCAAGAATGGGATAAGTATGCGGAGCGTGTTGGTGTTATTGGAAAATAA
Upstream 100 bases:
>100_bases AATCTCTCTTTCCATATGTTCAAGTGTTCCTTTCCTAATAGTCCAAATATTCAAGGTAACATAACTTAGCCCATTCTAAA ATAAGATAGAAATTCAGGTT
Downstream 100 bases:
>100_bases TAAATAATGATTAAGGGCAAGGATGCCCAACTATTCTTGAGGTTCTGATGCAGCATTTGAATAAAGCAATGAAAAAGCTA CACGTGATGGTTAAGCCTGT
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MKLNKIMLTLLSVCTIASNPMMAYAKDHNETIDAQEPPNIILIVADDLGWTDLSRYGSEIQTPNIDLIAHEGIQFTDFHA SVSCSPTRTMLLTGVDNHQAGMGNMSELLTEAQRGQPGYEGYINKDVVTLSEVLKNNNYNTYMAGKWHLGHQQTNWPYAR GFERSFSTLEAGGSHWSDMTGLLAEIQETSTYVRDNKQLTELPRSFYSTTAYTDELMTYIREGKRNNKPFFGYLAFTAPH DPLHAPEPWLSEYEGVYDSGYEVLKAQRIKNSKKLGLISQDAPEPEMHPVVTPWKQLSKEQKMIETKAMETYAGMISNMD YNVGRLQRFLKDINEYDNTIFVFMSDNGANPWFSEEYPGNRGSSFLAQFDNSLENIGQPMSHYAYGAGWASASNGPLDRF KMTVSEGGIRVPLLISGPGINKRDDINGSFAYVTDLMPTLLDYANAKHPDTFNGRDVIDMQGKSMRQMLEGKKESVHSDS DVTSGEMRFGRWTRLGDFKAAMIPKPYGDGQWKLFNLVNDPGETNDLSKQYPQKLQQLTQEWDKYAERVGVIGK
Sequences:
>Translated_554_residues MKLNKIMLTLLSVCTIASNPMMAYAKDHNETIDAQEPPNIILIVADDLGWTDLSRYGSEIQTPNIDLIAHEGIQFTDFHA SVSCSPTRTMLLTGVDNHQAGMGNMSELLTEAQRGQPGYEGYINKDVVTLSEVLKNNNYNTYMAGKWHLGHQQTNWPYAR GFERSFSTLEAGGSHWSDMTGLLAEIQETSTYVRDNKQLTELPRSFYSTTAYTDELMTYIREGKRNNKPFFGYLAFTAPH DPLHAPEPWLSEYEGVYDSGYEVLKAQRIKNSKKLGLISQDAPEPEMHPVVTPWKQLSKEQKMIETKAMETYAGMISNMD YNVGRLQRFLKDINEYDNTIFVFMSDNGANPWFSEEYPGNRGSSFLAQFDNSLENIGQPMSHYAYGAGWASASNGPLDRF KMTVSEGGIRVPLLISGPGINKRDDINGSFAYVTDLMPTLLDYANAKHPDTFNGRDVIDMQGKSMRQMLEGKKESVHSDS DVTSGEMRFGRWTRLGDFKAAMIPKPYGDGQWKLFNLVNDPGETNDLSKQYPQKLQQLTQEWDKYAERVGVIGK >Mature_554_residues MKLNKIMLTLLSVCTIASNPMMAYAKDHNETIDAQEPPNIILIVADDLGWTDLSRYGSEIQTPNIDLIAHEGIQFTDFHA SVSCSPTRTMLLTGVDNHQAGMGNMSELLTEAQRGQPGYEGYINKDVVTLSEVLKNNNYNTYMAGKWHLGHQQTNWPYAR GFERSFSTLEAGGSHWSDMTGLLAEIQETSTYVRDNKQLTELPRSFYSTTAYTDELMTYIREGKRNNKPFFGYLAFTAPH DPLHAPEPWLSEYEGVYDSGYEVLKAQRIKNSKKLGLISQDAPEPEMHPVVTPWKQLSKEQKMIETKAMETYAGMISNMD YNVGRLQRFLKDINEYDNTIFVFMSDNGANPWFSEEYPGNRGSSFLAQFDNSLENIGQPMSHYAYGAGWASASNGPLDRF KMTVSEGGIRVPLLISGPGINKRDDINGSFAYVTDLMPTLLDYANAKHPDTFNGRDVIDMQGKSMRQMLEGKKESVHSDS DVTSGEMRFGRWTRLGDFKAAMIPKPYGDGQWKLFNLVNDPGETNDLSKQYPQKLQQLTQEWDKYAERVGVIGK
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI38569405, Length=560, Percent_Identity=23.9285714285714, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI38569407, Length=417, Percent_Identity=25.4196642685851, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI109389362, Length=546, Percent_Identity=23.6263736263736, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI59797060, Length=548, Percent_Identity=23.7226277372263, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI146229331, Length=442, Percent_Identity=28.5067873303167, Blast_Score=109, Evalue=9e-24, Organism=Homo sapiens, GI146229329, Length=442, Percent_Identity=28.5067873303167, Blast_Score=109, Evalue=9e-24, Organism=Homo sapiens, GI6005990, Length=442, Percent_Identity=28.5067873303167, Blast_Score=109, Evalue=9e-24, Organism=Homo sapiens, GI146229324, Length=442, Percent_Identity=28.5067873303167, Blast_Score=109, Evalue=9e-24, Organism=Homo sapiens, GI45430057, Length=493, Percent_Identity=26.1663286004057, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI4503899, Length=224, Percent_Identity=31.6964285714286, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI53831991, Length=459, Percent_Identity=25.2723311546841, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI58743319, Length=334, Percent_Identity=24.5508982035928, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI157266309, Length=313, Percent_Identity=26.1980830670927, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI31742482, Length=466, Percent_Identity=24.2489270386266, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI71852586, Length=120, Percent_Identity=36.6666666666667, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI71852584, Length=120, Percent_Identity=36.6666666666667, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1790233, Length=183, Percent_Identity=29.5081967213115, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790112, Length=505, Percent_Identity=22.3762376237624, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115533416, Length=533, Percent_Identity=24.765478424015, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI115533418, Length=523, Percent_Identity=24.4741873804971, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17559078, Length=238, Percent_Identity=27.3109243697479, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI281363223, Length=479, Percent_Identity=27.348643006263, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI24666109, Length=414, Percent_Identity=26.5700483091787, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24666175, Length=475, Percent_Identity=25.2631578947368, Blast_Score=116, Evalue=5e-26, Organism=Drosophila melanogaster, GI281366397, Length=294, Percent_Identity=29.5918367346939, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI281366395, Length=294, Percent_Identity=29.5918367346939, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24666163, Length=294, Percent_Identity=29.5918367346939, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24653364, Length=451, Percent_Identity=25.2771618625277, Blast_Score=86, Evalue=9e-17, Organism=Drosophila melanogaster, GI19922168, Length=445, Percent_Identity=24.7191011235955, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 62522; Mature: 62522
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKIMLTLLSVCTIASNPMMAYAKDHNETIDAQEPPNIILIVADDLGWTDLSRYGSEI CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCC QTPNIDLIAHEGIQFTDFHASVSCSPTRTMLLTGVDNHQAGMGNMSELLTEAQRGQPGYE CCCCEEEEEECCCEEEECCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC GYINKDVVTLSEVLKNNNYNTYMAGKWHLGHQQTNWPYARGFERSFSTLEAGGSHWSDMT CCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH GLLAEIQETSTYVRDNKQLTELPRSFYSTTAYTDELMTYIREGKRNNKPFFGYLAFTAPH HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC DPLHAPEPWLSEYEGVYDSGYEVLKAQRIKNSKKLGLISQDAPEPEMHPVVTPWKQLSKE CCCCCCCHHHHHHCCHHHCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHH QKMIETKAMETYAGMISNMDYNVGRLQRFLKDINEYDNTIFVFMSDNGANPWFSEEYPGN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC RGSSFLAQFDNSLENIGQPMSHYAYGAGWASASNGPLDRFKMTVSEGGIRVPLLISGPGI CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHEEEEECCCCEEEEEEEECCCC NKRDDINGSFAYVTDLMPTLLDYANAKHPDTFNGRDVIDMQGKSMRQMLEGKKESVHSDS CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCHHHHCCCCC DVTSGEMRFGRWTRLGDFKAAMIPKPYGDGQWKLFNLVNDPGETNDLSKQYPQKLQQLTQ CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH EWDKYAERVGVIGK HHHHHHHHHCCCCC >Mature Secondary Structure MKLNKIMLTLLSVCTIASNPMMAYAKDHNETIDAQEPPNIILIVADDLGWTDLSRYGSEI CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCC QTPNIDLIAHEGIQFTDFHASVSCSPTRTMLLTGVDNHQAGMGNMSELLTEAQRGQPGYE CCCCEEEEEECCCEEEECCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC GYINKDVVTLSEVLKNNNYNTYMAGKWHLGHQQTNWPYARGFERSFSTLEAGGSHWSDMT CCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH GLLAEIQETSTYVRDNKQLTELPRSFYSTTAYTDELMTYIREGKRNNKPFFGYLAFTAPH HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC DPLHAPEPWLSEYEGVYDSGYEVLKAQRIKNSKKLGLISQDAPEPEMHPVVTPWKQLSKE CCCCCCCHHHHHHCCHHHCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHH QKMIETKAMETYAGMISNMDYNVGRLQRFLKDINEYDNTIFVFMSDNGANPWFSEEYPGN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC RGSSFLAQFDNSLENIGQPMSHYAYGAGWASASNGPLDRFKMTVSEGGIRVPLLISGPGI CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHEEEEECCCCEEEEEEEECCCC NKRDDINGSFAYVTDLMPTLLDYANAKHPDTFNGRDVIDMQGKSMRQMLEGKKESVHSDS CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHCCHHHHCCCCC DVTSGEMRFGRWTRLGDFKAAMIPKPYGDGQWKLFNLVNDPGETNDLSKQYPQKLQQLTQ CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH EWDKYAERVGVIGK HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]