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The map label for this gene is yejH [H]

Identifier: 167623627

GI number: 167623627

Start: 2032868

End: 2034610

Strand: Reverse

Name: yejH [H]

Synonym: Shal_1696

Alternate gene names: 167623627

Gene position: 2034610-2032868 (Counterclockwise)

Preceding gene: 167623628

Following gene: 167623626

Centisome position: 38.93

GC content: 44.81

Gene sequence:

>1743_bases
GTGCAACTGAGAGATTATCAACAACAATCTGTTGACGCCGCTATTAGTCACTTTAGAGCAAGTTCAGACTCGGCTGTTTT
GGTGCTGCCTACGGGCGCGGGTAAGAGTATTGTCATTGCCGAGCTGGCCAGAATCGCCAAAGGGCGAGTGTTAGTCCTTA
CGCACGTTAAAGAGCTGGTTGCTCAAAATGCCGAAAAAGTTGGCCTGCTTACCACAAAAGCTCAAATCTACTCAGCTGGA
CTCAATCAAAAATCTACCGACGGCAAAACGGTTGTCGCCAGTATTCAATCAGCGGTAAAACAACCGAGCCAATTTGATGA
GCCATACAGCTTGGTGATTATTGATGAATGTCACCGTGTTAGCCCTGATAAAGATAGCCAATATCAGCAACTACTCACTC
ATTTGAAGTCTAAAAATAGTCGTATTAGATTACTTGGGCTAACCGCAACGCCCTACCGACTCGATTTTGGTTGGATATAT
CGCCATCACTACCACGGAAAAATTGGCAATACAGACAAGCCAGTATTTGAAAAGTGCATATTCGAACTGCCGATGCGCCC
ACTGATTAAACAGGGTTTTTTAAGTCAACCTAAAATGTTTGATGGGCTCAGTGCTCAATATGATTTTAGTGAGCTAACGG
CATCGGCAACGGGCGAATACAATGAAAAAGAAGTGAACTCCATTCTCAACCATTGTGGCCGCGCAACCACAGCTATCGTT
AAACAGTTAATTGCCCTTGGGGAACATCGTCAGGGGATCATTATTTTTGCCGCCACGGTTAAGCATGCCGAAGAGATAGT
CCTAAGGCTCGCGGGAGAGGCTGTTGCGTTGATCACGGCAAAAACCTCACGAGATGACCGAGACCGTCTTATCGGCGAGT
TTAAGGAAAAAAACATTAAGTTTTTGGTCAACGTTGCGGTGTTAACAACAGGATTTGACGCTCCTCATGTCGATCTTATT
GCCATACTGCGCCCTACCGCCTCTGTTAGCTTATTTCAGCAGATGGTTGGCCGAGGTCTAAGAATAGATAAAAACAAGGC
TGAGTGTCTTGTCATTGATTATGCAGCCAACGGCTACGACCTCTTCTATCCAGAAGTTGGCCAACCTAAACCTAATAGCA
AATGCAAGCCAGTACAAGTACATTGCCCGGTCTGCAATTTTGCCAATATCTTTTGGGGCTTAACTGATAACGATGGTGAC
ATTATCGAGCATTTTGGTCGCCGCTGTCAGGCGCTAATAGAAAGAGATGGGCGCAAAACACAATGCGATTTCCGTTTTCG
CTCTAAGGCTTGCCCTAATTGCGGTGAAGAAAACGATATTGCCGCCAAAGTCTGTCACCACTGCCAGGCAATTCTAGTCG
ATCCTGATAAGCGCTTAAAAGAGGTCTTACAGCAGAAGCATCACCACCTGTTTAAGTGTCAAAGTATGGTTCTCGAACCT
GAAGCTGAACGTTTGGTTGTGAGATATATCGATCTTGATGGCAATGATTTTTGCCGCTACTTCAAGATGCAAACTCCGGC
ACAAATTCGCGCGCTGTTTGCCTTGTTCATTTTCCCCCACAGCCGTACGCCTGGCATAAAACATAAGAAATACCAAACAC
CAAAACAACTCTGTGACGATGCGACACTGTTTAGAAACCCAGATCTGTTATTACTGAAAAAAGGAAAGAAAGGCTGGGAG
CTGATGGAAACAATATTTGATTATAAAGGGCGATATCAAACCGAAAAATCACATTTTGAGTAA

Upstream 100 bases:

>100_bases
AAACACGACAAAAAAAGGATTCGCCGATATTTTACTTACCGCATCGAAGCAAATATGGGATCATTTACTCAATAGAATCG
TTTTTAATTAGGTTAGTTTC

Downstream 100 bases:

>100_bases
AAACCAGTAAATCGATTAACACGAATTCAAATATCGATTAGAACAATTGCAATGGCTATGATATAAAGTGTTCAAGCTAA
AACTGAGGAAGCTATCATGT

Product: type III restriction protein res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MQLRDYQQQSVDAAISHFRASSDSAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKELVAQNAEKVGLLTTKAQIYSAG
LNQKSTDGKTVVASIQSAVKQPSQFDEPYSLVIIDECHRVSPDKDSQYQQLLTHLKSKNSRIRLLGLTATPYRLDFGWIY
RHHYHGKIGNTDKPVFEKCIFELPMRPLIKQGFLSQPKMFDGLSAQYDFSELTASATGEYNEKEVNSILNHCGRATTAIV
KQLIALGEHRQGIIIFAATVKHAEEIVLRLAGEAVALITAKTSRDDRDRLIGEFKEKNIKFLVNVAVLTTGFDAPHVDLI
AILRPTASVSLFQQMVGRGLRIDKNKAECLVIDYAANGYDLFYPEVGQPKPNSKCKPVQVHCPVCNFANIFWGLTDNDGD
IIEHFGRRCQALIERDGRKTQCDFRFRSKACPNCGEENDIAAKVCHHCQAILVDPDKRLKEVLQQKHHHLFKCQSMVLEP
EAERLVVRYIDLDGNDFCRYFKMQTPAQIRALFALFIFPHSRTPGIKHKKYQTPKQLCDDATLFRNPDLLLLKKGKKGWE
LMETIFDYKGRYQTEKSHFE

Sequences:

>Translated_580_residues
MQLRDYQQQSVDAAISHFRASSDSAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKELVAQNAEKVGLLTTKAQIYSAG
LNQKSTDGKTVVASIQSAVKQPSQFDEPYSLVIIDECHRVSPDKDSQYQQLLTHLKSKNSRIRLLGLTATPYRLDFGWIY
RHHYHGKIGNTDKPVFEKCIFELPMRPLIKQGFLSQPKMFDGLSAQYDFSELTASATGEYNEKEVNSILNHCGRATTAIV
KQLIALGEHRQGIIIFAATVKHAEEIVLRLAGEAVALITAKTSRDDRDRLIGEFKEKNIKFLVNVAVLTTGFDAPHVDLI
AILRPTASVSLFQQMVGRGLRIDKNKAECLVIDYAANGYDLFYPEVGQPKPNSKCKPVQVHCPVCNFANIFWGLTDNDGD
IIEHFGRRCQALIERDGRKTQCDFRFRSKACPNCGEENDIAAKVCHHCQAILVDPDKRLKEVLQQKHHHLFKCQSMVLEP
EAERLVVRYIDLDGNDFCRYFKMQTPAQIRALFALFIFPHSRTPGIKHKKYQTPKQLCDDATLFRNPDLLLLKKGKKGWE
LMETIFDYKGRYQTEKSHFE
>Mature_580_residues
MQLRDYQQQSVDAAISHFRASSDSAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKELVAQNAEKVGLLTTKAQIYSAG
LNQKSTDGKTVVASIQSAVKQPSQFDEPYSLVIIDECHRVSPDKDSQYQQLLTHLKSKNSRIRLLGLTATPYRLDFGWIY
RHHYHGKIGNTDKPVFEKCIFELPMRPLIKQGFLSQPKMFDGLSAQYDFSELTASATGEYNEKEVNSILNHCGRATTAIV
KQLIALGEHRQGIIIFAATVKHAEEIVLRLAGEAVALITAKTSRDDRDRLIGEFKEKNIKFLVNVAVLTTGFDAPHVDLI
AILRPTASVSLFQQMVGRGLRIDKNKAECLVIDYAANGYDLFYPEVGQPKPNSKCKPVQVHCPVCNFANIFWGLTDNDGD
IIEHFGRRCQALIERDGRKTQCDFRFRSKACPNCGEENDIAAKVCHHCQAILVDPDKRLKEVLQQKHHHLFKCQSMVLEP
EAERLVVRYIDLDGNDFCRYFKMQTPAQIRALFALFIFPHSRTPGIKHKKYQTPKQLCDDATLFRNPDLLLLKKGKKGWE
LMETIFDYKGRYQTEKSHFE

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=576, Percent_Identity=52.2569444444444, Blast_Score=610, Evalue=1e-176,
Organism=Saccharomyces cerevisiae, GI6320539, Length=371, Percent_Identity=25.3369272237197, Blast_Score=125, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 65542; Mature: 65542

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRDYQQQSVDAAISHFRASSDSAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKELV
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHH
AQNAEKVGLLTTKAQIYSAGLNQKSTDGKTVVASIQSAVKQPSQFDEPYSLVIIDECHRV
HCCCHHCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
SPDKDSQYQQLLTHLKSKNSRIRLLGLTATPYRLDFGWIYRHHYHGKIGNTDKPVFEKCI
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCHHHHHHH
FELPMRPLIKQGFLSQPKMFDGLSAQYDFSELTASATGEYNEKEVNSILNHCGRATTAIV
HHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
KQLIALGEHRQGIIIFAATVKHAEEIVLRLAGEAVALITAKTSRDDRDRLIGEFKEKNIK
HHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCEE
FLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRIDKNKAECLVIDYAANGYD
EEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCEE
LFYPEVGQPKPNSKCKPVQVHCPVCNFANIFWGLTDNDGDIIEHFGRRCQALIERDGRKT
EECCCCCCCCCCCCCCCEEEECCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCC
QCDFRFRSKACPNCGEENDIAAKVCHHCQAILVDPDKRLKEVLQQKHHHLFKCQSMVLEP
EECEEECCCCCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
EAERLVVRYIDLDGNDFCRYFKMQTPAQIRALFALFIFPHSRTPGIKHKKYQTPKQLCDD
CCCEEEEEEEECCCCHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCC
ATLFRNPDLLLLKKGKKGWELMETIFDYKGRYQTEKSHFE
CHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQLRDYQQQSVDAAISHFRASSDSAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKELV
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHH
AQNAEKVGLLTTKAQIYSAGLNQKSTDGKTVVASIQSAVKQPSQFDEPYSLVIIDECHRV
HCCCHHCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
SPDKDSQYQQLLTHLKSKNSRIRLLGLTATPYRLDFGWIYRHHYHGKIGNTDKPVFEKCI
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEEEEECCCCCCCCCHHHHHHH
FELPMRPLIKQGFLSQPKMFDGLSAQYDFSELTASATGEYNEKEVNSILNHCGRATTAIV
HHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH
KQLIALGEHRQGIIIFAATVKHAEEIVLRLAGEAVALITAKTSRDDRDRLIGEFKEKNIK
HHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCEE
FLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRIDKNKAECLVIDYAANGYD
EEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCEE
LFYPEVGQPKPNSKCKPVQVHCPVCNFANIFWGLTDNDGDIIEHFGRRCQALIERDGRKT
EECCCCCCCCCCCCCCCEEEECCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHCCCCCC
QCDFRFRSKACPNCGEENDIAAKVCHHCQAILVDPDKRLKEVLQQKHHHLFKCQSMVLEP
EECEEECCCCCCCCCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
EAERLVVRYIDLDGNDFCRYFKMQTPAQIRALFALFIFPHSRTPGIKHKKYQTPKQLCDD
CCCEEEEEEEECCCCHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCC
ATLFRNPDLLLLKKGKKGWELMETIFDYKGRYQTEKSHFE
CHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]