| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is grxA [H]
Identifier: 167623626
GI number: 167623626
Start: 2032505
End: 2032771
Strand: Reverse
Name: grxA [H]
Synonym: Shal_1695
Alternate gene names: 167623626
Gene position: 2032771-2032505 (Counterclockwise)
Preceding gene: 167623627
Following gene: 167623615
Centisome position: 38.89
GC content: 41.57
Gene sequence:
>267_bases ATGTTTGTTGTAATTTTCGGTCGTCCAGGTTGTCCTTATTGTGTCCGCGCAGTACAAGTTGCTGAGCAACTCACAGAAAA GCGCGATGACTTTAAATTTAAGTACGTAGACATTCACGCTGAAGGGATCAGTAAAGCTGATCTAGAAAAAACAGTAGGCA AGCCAGTTGAAACTGTGCCACAAATCTTTGTTGATCAAGAGCACGTTGGTGGTTGCACTGAGTTTGAACAATATGTAAGA GACAACGAATTAATGCCTGCTGCATAA
Upstream 100 bases:
>100_bases GTAAAAACCAGTAAATCGATTAACACGAATTCAAATATCGATTAGAACAATTGCAATGGCTATGATATAAAGTGTTCAAG CTAAAACTGAGGAAGCTATC
Downstream 100 bases:
>100_bases GTAACATACTCAGTCCATTATAAAAAAGGAGGCCAAGGCCTCCTTTTTATTTGCGTTAGATTAACTACAGCACGTACTTC ATTGAAAATATCACACGATT
Product: glutaredoxin 1
Products: deoxyribonucleotides [C]
Alternate protein names: Grx1 [H]
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVPQIFVDQEHVGGCTEFEQYVR DNELMPAA
Sequences:
>Translated_88_residues MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVPQIFVDQEHVGGCTEFEQYVR DNELMPAA >Mature_88_residues MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVPQIFVDQEHVGGCTEFEQYVR DNELMPAA
Specific function: The disulfide bond functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. In addition, it is also involved in reducing some disulfides in a coupled system with glutathione re
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1787073, Length=82, Percent_Identity=64.6341463414634, Blast_Score=121, Evalue=8e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011902 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 9965; Mature: 9965
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVP CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHH QIFVDQEHVGGCTEFEQYVRDNELMPAA HHHCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFVVIFGRPGCPYCVRAVQVAEQLTEKRDDFKFKYVDIHAEGISKADLEKTVGKPVETVP CEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHHH QIFVDQEHVGGCTEFEQYVRDNELMPAA HHHCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ribonucleotides [C]
Specific reaction: ribonucleotides = deoxyribonucleotides [C]
General reaction: deoxyribonucleotide biosynthesis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]