| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is acsA
Identifier: 167623628
GI number: 167623628
Start: 2034792
End: 2036744
Strand: Reverse
Name: acsA
Synonym: Shal_1697
Alternate gene names: 167623628
Gene position: 2036744-2034792 (Counterclockwise)
Preceding gene: 167623630
Following gene: 167623627
Centisome position: 38.97
GC content: 47.11
Gene sequence:
>1953_bases ATGAGCACGCAGTCTCTCTATAAAGTTCCAAGTGAAATCGCTGCAAACGCACTTGTAAACGATGAACAATATAAAAAAAT GTACCAGGAGTCGATTGTAAACCCTGAAGGTTTCTGGAGAGAACACGGCAACCGTATCGACTGGATAAAGCCCTTTACTA AGGTAAAGAAAACCTCTTTCGATGACCACAACTTATTTATTAAGTGGTTCTACGATGGCACGCTTAACGCGTCTGCAAAC TGTTTAGATAGACACCTAGAAAACAATGCCGATAAGCTGGCCATTATTTGGGAAGGTGATGACGCTAAAGATCAGCGTAC GCTGACTTACGGCCAATTACATACGCAAGTCTGTAAATTTGCTAATGCACTGCGTAGCCAAGGTGTACGCCGTGGTGACG TCGTCACTATATACATGCCTATGGTACCTGAAGCGGCTGTTGCTATGCTTGCATGTGCCCGTATTGGTGCCATTCACTCT GTTGTCTTTGGTGGTTTCTCACCCGACTCGATTGCCTCACGTGTGATTGACGGTAATTCAAAAGTGGTTATCACGGCCGA TGAAGGTGTGCGTGCTGGTCGTATCATTCCACTTAAAGCCAATATCGATGAAGCCCTTTCTCATCCTGATGTAAACTGCG TTGAAAAAGTCATCGTGATGAAACGCACGGGTGGAGATATCAACTGGGTTGAAGGTCGTGATATCTGGTGGGACTCCTTA ATGGATACTGCATCAGAGCATTGCATTGCTGAAGAGATGGGCGCAGAAGATCCGCTGTTCCTGCTCTATACATCAGGCTC AACTGGTAACCCTAAAGGTGTGCTTCATACCACGGGTGGTTACATGGTTTACGCAGCCATGACCCACGAATATGTATTCG ATTACAAAGAGAATGAAGTTTATTGGTGTACGGCAGATGTAGGCTGGATCACCGGTCACTCTTACATGGTTTACGGACCA CTAGCCAATGGCGCAACAGTGCTTATTCATGAAGGCGTACCAAACTATCCAAGCCCAGCCCGTTTAGGTGAGATGGTTGA CCGTCATAAAGTAAACATTCTTTATACGGCTCCAACGCTTATTCGCGCACTAATGGCTGAAGGAAAAGAGCAGTTTGCAG GCTTTGATGGTAGCTCACTGCGGATTATGGGCTCGGTGGGTGAGCCTATTAATCCTGAAGCTTGGCGCTGGTATAACGAT GTTATTGGTCATGAGAAATGCCCAATTGTTGATACTTGGTGGCAAACGGAAACTGGCGGGATTTTGATTAGCCCACTGCC AGGTGCAACGGATACCAAACCAGGCTCTGCAACCCGTCCATTCTTTGGCGTACAACCAGCACTTGTCGATAATATGGGTA ATATCGTTGACGGTGCTAGCGAAGGTAACTTAGTTATCTTAGATTCTTGGCCGGGGCAGATGCGTACCGTATTTGGCGAT CACGACCGATTCGTACTGACTTACTTTAAAACATTTAGAGGCATGTACTTTACCGGTGATGGTGCTAAGCGTGACGAAGA CGGTTACTACTGGATCACCGGACGTGTCGATGATGTGATTAACGTATCGGGTCACCGTTTAGGTACCGCTGAAGTTGAAA GTGCATTAGTTGCTCACGAGTTCGTAGCAGAGGCTGCTGTTGTAGGTTATCCGCACGATATTAAGGGACAAGGGATCTAC GCCTATGTCACCTTGACCAAAGGGTCGGTTGAAACCGAAGAGCTGCGCCAAGAGTTAAGACAATGGGTAAGAAAAGAGAT TGGTGCCCTTGCGACCCCAGATCTTATCCAGTGGGCAGGCGGTTTACCTAAAACACGCTCGGGCAAAATTATGCGCCGTT TCCTACGCAAGATTGCGGCTAATGAGGTCAGCAACTTAGGTGACTCTTCGACACTCGCGGATCCTGCCGTTATCGATACA CTGATTGAGACGCGTCTTAATCGTAGCGAATAA
Upstream 100 bases:
>100_bases AAAAAATAAGGAAAATATTTTACTAGACCAAGGTCTAATAGAGAAACCCCCCTCTCCCAATCCATACTCAACTTACGCAT TATTAGATAAGGGAAGCCCA
Downstream 100 bases:
>100_bases ACATATACGCAAGATATTAAGTTCTACAGTTTGACTCCCTAGCCCCTCACAGAGGGGCTTTTTTTGTCCCATTTTTACCT CAAACACGACAAAAAAAGGA
Product: acetyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acyl-activating enzyme
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MSTQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSFDDHNLFIKWFYDGTLNASAN CLDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHTQVCKFANALRSQGVRRGDVVTIYMPMVPEAAVAMLACARIGAIHS VVFGGFSPDSIASRVIDGNSKVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWDSL MDTASEHCIAEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGP LANGATVLIHEGVPNYPSPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFAGFDGSSLRIMGSVGEPINPEAWRWYND VIGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNMGNIVDGASEGNLVILDSWPGQMRTVFGD HDRFVLTYFKTFRGMYFTGDGAKRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHEFVAEAAVVGYPHDIKGQGIY AYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRKIAANEVSNLGDSSTLADPAVIDT LIETRLNRSE
Sequences:
>Translated_650_residues MSTQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSFDDHNLFIKWFYDGTLNASAN CLDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHTQVCKFANALRSQGVRRGDVVTIYMPMVPEAAVAMLACARIGAIHS VVFGGFSPDSIASRVIDGNSKVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWDSL MDTASEHCIAEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGP LANGATVLIHEGVPNYPSPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFAGFDGSSLRIMGSVGEPINPEAWRWYND VIGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNMGNIVDGASEGNLVILDSWPGQMRTVFGD HDRFVLTYFKTFRGMYFTGDGAKRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHEFVAEAAVVGYPHDIKGQGIY AYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRKIAANEVSNLGDSSTLADPAVIDT LIETRLNRSE >Mature_649_residues STQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSFDDHNLFIKWFYDGTLNASANC LDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHTQVCKFANALRSQGVRRGDVVTIYMPMVPEAAVAMLACARIGAIHSV VFGGFSPDSIASRVIDGNSKVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWDSLM DTASEHCIAEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEVYWCTADVGWITGHSYMVYGPL ANGATVLIHEGVPNYPSPARLGEMVDRHKVNILYTAPTLIRALMAEGKEQFAGFDGSSLRIMGSVGEPINPEAWRWYNDV IGHEKCPIVDTWWQTETGGILISPLPGATDTKPGSATRPFFGVQPALVDNMGNIVDGASEGNLVILDSWPGQMRTVFGDH DRFVLTYFKTFRGMYFTGDGAKRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHEFVAEAAVVGYPHDIKGQGIYA YVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAGGLPKTRSGKIMRRFLRKIAANEVSNLGDSSTLADPAVIDTL IETRLNRSE
Specific function: Enables The Cell To Use Acetate During Aerobic Growth To Generate Energy Via The Tca Cycle, And Biosynthetic Compounds Via The Glyoxylate Shunt. Acetylates Chey, The Response Regulator Involved In Flagellar Movement And Chemotaxis. [C]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family
Homologues:
Organism=Homo sapiens, GI8923896, Length=670, Percent_Identity=51.7910447761194, Blast_Score=681, Evalue=0.0, Organism=Homo sapiens, GI253970489, Length=683, Percent_Identity=50.805270863836, Blast_Score=676, Evalue=0.0, Organism=Homo sapiens, GI28416953, Length=623, Percent_Identity=47.9935794542536, Blast_Score=613, Evalue=1e-175, Organism=Homo sapiens, GI13375727, Length=631, Percent_Identity=36.4500792393027, Blast_Score=392, Evalue=1e-109, Organism=Homo sapiens, GI42544132, Length=532, Percent_Identity=29.1353383458647, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI122937307, Length=550, Percent_Identity=28.1818181818182, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI38505220, Length=515, Percent_Identity=29.5145631067961, Blast_Score=191, Evalue=3e-48, Organism=Homo sapiens, GI115511026, Length=535, Percent_Identity=28.5981308411215, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI31982927, Length=639, Percent_Identity=25.508607198748, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI58082049, Length=513, Percent_Identity=27.0955165692008, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI157311624, Length=494, Percent_Identity=26.7206477732794, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI157311622, Length=494, Percent_Identity=26.7206477732794, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI195947378, Length=423, Percent_Identity=25.531914893617, Blast_Score=106, Evalue=9e-23, Organism=Homo sapiens, GI187761345, Length=390, Percent_Identity=27.1794871794872, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI187761343, Length=390, Percent_Identity=27.1794871794872, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI42544134, Length=350, Percent_Identity=25.4285714285714, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI156151445, Length=575, Percent_Identity=22.4347826086957, Blast_Score=90, Evalue=6e-18, Organism=Escherichia coli, GI1790505, Length=645, Percent_Identity=68.5271317829457, Blast_Score=956, Evalue=0.0, Organism=Escherichia coli, GI1786529, Length=638, Percent_Identity=37.9310344827586, Blast_Score=411, Evalue=1e-116, Organism=Escherichia coli, GI1788107, Length=589, Percent_Identity=23.9388794567063, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI221142682, Length=528, Percent_Identity=21.780303030303, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI145693145, Length=524, Percent_Identity=22.5190839694656, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1786810, Length=559, Percent_Identity=21.2880143112701, Blast_Score=79, Evalue=7e-16, Organism=Caenorhabditis elegans, GI71983001, Length=661, Percent_Identity=50.6807866868381, Blast_Score=629, Evalue=1e-180, Organism=Caenorhabditis elegans, GI71982997, Length=663, Percent_Identity=50.5279034690799, Blast_Score=629, Evalue=1e-180, Organism=Caenorhabditis elegans, GI17569507, Length=618, Percent_Identity=22.168284789644, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17558820, Length=530, Percent_Identity=23.7735849056604, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI32563687, Length=547, Percent_Identity=23.0347349177331, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17560308, Length=566, Percent_Identity=23.8515901060071, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538037, Length=137, Percent_Identity=32.8467153284672, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17560140, Length=376, Percent_Identity=22.0744680851064, Blast_Score=74, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17557194, Length=127, Percent_Identity=33.8582677165354, Blast_Score=73, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6323182, Length=643, Percent_Identity=48.9891135303266, Blast_Score=623, Evalue=1e-179, Organism=Saccharomyces cerevisiae, GI6319264, Length=643, Percent_Identity=45.7231726283048, Blast_Score=565, Evalue=1e-162, Organism=Saccharomyces cerevisiae, GI6319699, Length=377, Percent_Identity=22.5464190981432, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24667955, Length=664, Percent_Identity=51.6566265060241, Blast_Score=667, Evalue=0.0, Organism=Drosophila melanogaster, GI62472339, Length=562, Percent_Identity=55.1601423487544, Blast_Score=617, Evalue=1e-177, Organism=Drosophila melanogaster, GI24667959, Length=520, Percent_Identity=55.5769230769231, Blast_Score=575, Evalue=1e-164, Organism=Drosophila melanogaster, GI21355225, Length=646, Percent_Identity=34.5201238390093, Blast_Score=364, Evalue=1e-101, Organism=Drosophila melanogaster, GI18859661, Length=540, Percent_Identity=23.3333333333333, Blast_Score=98, Evalue=2e-20, Organism=Drosophila melanogaster, GI24581924, Length=545, Percent_Identity=22.0183486238532, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI21358303, Length=561, Percent_Identity=20.4991087344029, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24656500, Length=537, Percent_Identity=22.5325884543762, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACSA_SHEHH (B0TPY4)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673922.1 - ProteinModelPortal: B0TPY4 - SMR: B0TPY4 - GeneID: 5903133 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1697 - HOGENOM: HBG547964 - OMA: ETASEHC - ProtClustDB: PRK00174 - BioCyc: SHAL458817:SHAL_1697-MONOMER - HAMAP: MF_01123 - InterPro: IPR011904 - InterPro: IPR020845 - InterPro: IPR000873 - TIGRFAMs: TIGR02188
Pfam domain/function: PF00501 AMP-binding
EC number: =6.2.1.1
Molecular weight: Translated: 72065; Mature: 71934
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00455 AMP_BINDING
Important sites: ACT_SITE 517-517
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSF CCCCHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCC DDHNLFIKWFYDGTLNASANCLDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHTQVCKF CCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHH ANALRSQGVRRGDVVTIYMPMVPEAAVAMLACARIGAIHSVVFGGFSPDSIASRVIDGNS HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC KVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWDSL EEEEECCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHEEEECCCCEEEECCCCCHHHHH MDTASEHCIAEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEV HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEEEEEEEEECCCEE YWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNYPSPARLGEMVDRHKVNILYTAPTL EEEECCCCEEECCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAEGKEQFAGFDGSSLRIMGSVGEPINPEAWRWYNDVIGHEKCPIVDTWWQTETGG HHHHHHCCHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCC ILISPLPGATDTKPGSATRPFFGVQPALVDNMGNIVDGASEGNLVILDSWPGQMRTVFGD EEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCEEEEECCCCCEEHEECC HDRFVLTYFKTFRGMYFTGDGAKRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHE CCCCCEEEHHHHCCEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH FVAEAAVVGYPHDIKGQGIYAYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAG HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCC GLPKTRSGKIMRRFLRKIAANEVSNLGDSSTLADPAVIDTLIETRLNRSE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure STQSLYKVPSEIAANALVNDEQYKKMYQESIVNPEGFWREHGNRIDWIKPFTKVKKTSF CCCHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHCCC DDHNLFIKWFYDGTLNASANCLDRHLENNADKLAIIWEGDDAKDQRTLTYGQLHTQVCKF CCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHH ANALRSQGVRRGDVVTIYMPMVPEAAVAMLACARIGAIHSVVFGGFSPDSIASRVIDGNS HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC KVVITADEGVRAGRIIPLKANIDEALSHPDVNCVEKVIVMKRTGGDINWVEGRDIWWDSL EEEEECCCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHEEEECCCCEEEECCCCCHHHHH MDTASEHCIAEEMGAEDPLFLLYTSGSTGNPKGVLHTTGGYMVYAAMTHEYVFDYKENEV HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEEEEEEEEECCCEE YWCTADVGWITGHSYMVYGPLANGATVLIHEGVPNYPSPARLGEMVDRHKVNILYTAPTL EEEECCCCEEECCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECHHH IRALMAEGKEQFAGFDGSSLRIMGSVGEPINPEAWRWYNDVIGHEKCPIVDTWWQTETGG HHHHHHCCHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCC ILISPLPGATDTKPGSATRPFFGVQPALVDNMGNIVDGASEGNLVILDSWPGQMRTVFGD EEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCEEEEECCCCCEEHEECC HDRFVLTYFKTFRGMYFTGDGAKRDEDGYYWITGRVDDVINVSGHRLGTAEVESALVAHE CCCCCEEEHHHHCCEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH FVAEAAVVGYPHDIKGQGIYAYVTLTKGSVETEELRQELRQWVRKEIGALATPDLIQWAG HHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCC GLPKTRSGKIMRRFLRKIAANEVSNLGDSSTLADPAVIDTLIETRLNRSE CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA