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The map label for this gene is yehT [C]

Identifier: 167623494

GI number: 167623494

Start: 1883318

End: 1884028

Strand: Reverse

Name: yehT [C]

Synonym: Shal_1563

Alternate gene names: 167623494

Gene position: 1884028-1883318 (Counterclockwise)

Preceding gene: 167623495

Following gene: 167623493

Centisome position: 36.04

GC content: 45.15

Gene sequence:

>711_bases
TTGATTAGCTGCATCATAATTGACGACGAACCTTACGCCAGAGACGAGCTTGCGATTTTGCTTGAGAATGAACCTGACTT
TGAAGTGTTAGCTCAATGCAGCAATGCCGTAGAGGCTATGCAAGCCATTACAAAATTTAAACCTCAGCTAATCTTCTTAG
ATATTCAGATGCCGAAGATATCAGGCCTTGAGCTTGCAACGATGCTGGATCCTGATAACTTACCAAGAATCGTGTTTGTG
ACAGCATTTGATGAATACGCCATCACAGCATTTGAGAAACAGGCTTTCGATTACCTATTGAAACCGATTGAAGATACTCG
CTTTGCTAATACCTTAGCGCGATTGCGTAAAGATTTGACGCCGAAACTACTGGGCCCTATCGCCAGCAAGAAGCTTGAGC
ATATTCCCTGCTTTTGTGGCAACAGATTAAAGGTCGTAGCAACCGACTCGGTGCAATTTATTTATAGCGATATGAGCGGC
GTGCACGTTGTAACCAGCAACGAACTTGTACATACCCATATGACACTCAGAGTACTGGAGGAAAAAACCTCACTCATCTA
TTGTCACCGGCAGTATTTAATCGCCCCGACAGCCATTGCCGAAATCGAACTGCAAGAGGCTGGCGCCGAGGTAACAACAC
GCTCTGGCGCTAAGGTTCCTGTATCTAGGCGCTACTTGAAGCAACTCAAACAACTTTTTGGGTTCCAGTAA

Upstream 100 bases:

>100_bases
TCAAAACATGTTTGGCGCTCAGTTCGGTATTGCCATTGAGTTTGAGCCGAACCAATACACTACAATCAGTATTCACCTAC
CTATAATGGGATCTTAAACC

Downstream 100 bases:

>100_bases
CGATAAAAAGTTCAACCGCTAAGGTCAGCATACAACCACTGACCTTAGCAATTTGACCGCTTAGCTATTTGCAACTTTCC
GAAGCCATAAATAAGTTTAC

Product: putative two-component response-regulatory protein YehT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MISCIIIDDEPYARDELAILLENEPDFEVLAQCSNAVEAMQAITKFKPQLIFLDIQMPKISGLELATMLDPDNLPRIVFV
TAFDEYAITAFEKQAFDYLLKPIEDTRFANTLARLRKDLTPKLLGPIASKKLEHIPCFCGNRLKVVATDSVQFIYSDMSG
VHVVTSNELVHTHMTLRVLEEKTSLIYCHRQYLIAPTAIAEIELQEAGAEVTTRSGAKVPVSRRYLKQLKQLFGFQ

Sequences:

>Translated_236_residues
MISCIIIDDEPYARDELAILLENEPDFEVLAQCSNAVEAMQAITKFKPQLIFLDIQMPKISGLELATMLDPDNLPRIVFV
TAFDEYAITAFEKQAFDYLLKPIEDTRFANTLARLRKDLTPKLLGPIASKKLEHIPCFCGNRLKVVATDSVQFIYSDMSG
VHVVTSNELVHTHMTLRVLEEKTSLIYCHRQYLIAPTAIAEIELQEAGAEVTTRSGAKVPVSRRYLKQLKQLFGFQ
>Mature_236_residues
MISCIIIDDEPYARDELAILLENEPDFEVLAQCSNAVEAMQAITKFKPQLIFLDIQMPKISGLELATMLDPDNLPRIVFV
TAFDEYAITAFEKQAFDYLLKPIEDTRFANTLARLRKDLTPKLLGPIASKKLEHIPCFCGNRLKVVATDSVQFIYSDMSG
VHVVTSNELVHTHMTLRVLEEKTSLIYCHRQYLIAPTAIAEIELQEAGAEVTTRSGAKVPVSRRYLKQLKQLFGFQ

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=240, Percent_Identity=50.4166666666667, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1788724, Length=241, Percent_Identity=26.1410788381743, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26679; Mature: 26679

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISCIIIDDEPYARDELAILLENEPDFEVLAQCSNAVEAMQAITKFKPQLIFLDIQMPKI
CEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
SGLELATMLDPDNLPRIVFVTAFDEYAITAFEKQAFDYLLKPIEDTRFANTLARLRKDLT
CCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PKLLGPIASKKLEHIPCFCGNRLKVVATDSVQFIYSDMSGVHVVTSNELVHTHMTLRVLE
HHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCCEEEEECCCEEEHHHHHHHHH
EKTSLIYCHRQYLIAPTAIAEIELQEAGAEVTTRSGAKVPVSRRYLKQLKQLFGFQ
HHHCEEEEEHHEEECCHHHEEEEHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISCIIIDDEPYARDELAILLENEPDFEVLAQCSNAVEAMQAITKFKPQLIFLDIQMPKI
CEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
SGLELATMLDPDNLPRIVFVTAFDEYAITAFEKQAFDYLLKPIEDTRFANTLARLRKDLT
CCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PKLLGPIASKKLEHIPCFCGNRLKVVATDSVQFIYSDMSGVHVVTSNELVHTHMTLRVLE
HHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEECCCCEEEEECCCEEEHHHHHHHHH
EKTSLIYCHRQYLIAPTAIAEIELQEAGAEVTTRSGAKVPVSRRYLKQLKQLFGFQ
HHHCEEEEEHHEEECCHHHEEEEHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]