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The map label for this gene is cstA [C]

Identifier: 167623493

GI number: 167623493

Start: 1881743

End: 1883182

Strand: Reverse

Name: cstA [C]

Synonym: Shal_1562

Alternate gene names: 167623493

Gene position: 1883182-1881743 (Counterclockwise)

Preceding gene: 167623494

Following gene: 167623482

Centisome position: 36.03

GC content: 44.72

Gene sequence:

>1440_bases
ATGACATGGTTTTTTCTATGCATCGGTCTGTTAATCGGTGGCTATTTTATTTATGGCGCATTTGTCGAAAAGGTTTTTGG
CATCAATACAAAGCGTCAAACCCCAGCTTTCACCAAGACTGACGGTGTCGATTACGTCCCTATCTCTAAAGGTAAAGTTT
ACCTAATCCAGTTACTCAATATTGCAGGTGTAGGACCCATCTTCGGCCCTATCCTGGGTGCACTTTACGGCCCTGCAGCG
ATGCTTTGGATCGTACTCGGTTGTATTTTTGCTGGTGCCGTTCACGATTACTTCTCTGGCATGCTATCAATACGTAACAA
CGGCGAGTCAGTACCAAGCCTTGCCGGTAAATACCTAGGTAAAGGTGCTAAGCACTTTATGAACGTGTTTGCGATTATCT
TGCTGCTATTAGTTGGTGTGGTATTTATATCAGCTCCAGCTGGCCTTTTAGCTAAGCTGACAGGTTGGGATTTAAGCATT
TTCGTTGGTATCATCTTCGTATATTACTTGCTCGCAACAATCGTTCCTGTAGACAAGATTATTGGTCGTCTATACCCCTT
CTTTGGCGCATTACTGGTGTTCATGTCAGTTGGTTTAACTATCGCGTTGATTGTTTCTAGTGAACATACCTTACTTCCTG
GTGTTGAAGCAGGTGACTTCCTAACCAACCTTAATCCGAACGATATGCCATTATGGCCAGCCCTATTCATCACCATCGCT
TGTGGTGCAATTTCTGGTTTCCACGCAACTCAATCACCCCTCATGGCACGTTGTGTTGAAAACGAGTCGAATGGCCGCTT
TGTATTCTACGGCGCAATGATTGGTGAAGGTATTATCGCACTTATCTGGTGTGCTATTGCCTTGTCTTTCTTCGGCGGTG
TTGAAGGCTTAAATGCTGGCATGGCGGGTAACCCTGCAAACGTGGTTTACGAAGCATCTACTGGTCTTCTAGGCGCAGTA
GGCGGATTCTTAGCGGTATTGGGTGTAATCGTATTGCCTATCACCTCGGGTGACACCGCGTTCCGTAGTGCTCGTCTGAT
TTTGGCTGAGTTCTTCAAAATGCCACAAACAGAGCTACCAAAGCGTTTAATGTTTGCCATCCCACTATTTGTTGCAGGTG
CATTACTTACTCAAGTCGATTTTGGTGTCATTTGGCGTTACTTCGGTGTAGCAAACCAAGCTACCGCGGTAATGATGTTA
TGGACAGCTTCTGCTTATCTACTTCGTCATAATAAGTTCCACTGGATCTGTACAGCTCCAGCCATGTTTATGACTACCGT
TGTAATTAGCTTCCTACTCAGCTCACCAACGCTAGGTGCTGGTTTACCAATGACTATATCGACAGTTGCAGGTATCGTAT
CAACCCTCATCATTGCTGGTTTGATTATTGTAAAAACTAAAGGCAAAGGTGAAATAGAGGTTGTAGCTGAAGAGGCTTAA

Upstream 100 bases:

>100_bases
CCACTGACCTTAGCAATTTGACCGCTTAGCTATTTGCAACTTTCCGAAGCCATAAATAAGTTTACACTCCGCACAATTTT
AAGTTTAGCGAGTTAATATT

Downstream 100 bases:

>100_bases
TCGAAATTTGATTTGAAGTGTAAAAAAGCCAGTCATTTGACTGGCTTTTTAATACCCATAATTTGGGTTGCTCGCTAATA
TCGCCGCGGATTGGGTAAGC

Product: carbon starvation protein CstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MTWFFLCIGLLIGGYFIYGAFVEKVFGINTKRQTPAFTKTDGVDYVPISKGKVYLIQLLNIAGVGPIFGPILGALYGPAA
MLWIVLGCIFAGAVHDYFSGMLSIRNNGESVPSLAGKYLGKGAKHFMNVFAIILLLLVGVVFISAPAGLLAKLTGWDLSI
FVGIIFVYYLLATIVPVDKIIGRLYPFFGALLVFMSVGLTIALIVSSEHTLLPGVEAGDFLTNLNPNDMPLWPALFITIA
CGAISGFHATQSPLMARCVENESNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLNAGMAGNPANVVYEASTGLLGAV
GGFLAVLGVIVLPITSGDTAFRSARLILAEFFKMPQTELPKRLMFAIPLFVAGALLTQVDFGVIWRYFGVANQATAVMML
WTASAYLLRHNKFHWICTAPAMFMTTVVISFLLSSPTLGAGLPMTISTVAGIVSTLIIAGLIIVKTKGKGEIEVVAEEA

Sequences:

>Translated_479_residues
MTWFFLCIGLLIGGYFIYGAFVEKVFGINTKRQTPAFTKTDGVDYVPISKGKVYLIQLLNIAGVGPIFGPILGALYGPAA
MLWIVLGCIFAGAVHDYFSGMLSIRNNGESVPSLAGKYLGKGAKHFMNVFAIILLLLVGVVFISAPAGLLAKLTGWDLSI
FVGIIFVYYLLATIVPVDKIIGRLYPFFGALLVFMSVGLTIALIVSSEHTLLPGVEAGDFLTNLNPNDMPLWPALFITIA
CGAISGFHATQSPLMARCVENESNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLNAGMAGNPANVVYEASTGLLGAV
GGFLAVLGVIVLPITSGDTAFRSARLILAEFFKMPQTELPKRLMFAIPLFVAGALLTQVDFGVIWRYFGVANQATAVMML
WTASAYLLRHNKFHWICTAPAMFMTTVVISFLLSSPTLGAGLPMTISTVAGIVSTLIIAGLIIVKTKGKGEIEVVAEEA
>Mature_478_residues
TWFFLCIGLLIGGYFIYGAFVEKVFGINTKRQTPAFTKTDGVDYVPISKGKVYLIQLLNIAGVGPIFGPILGALYGPAAM
LWIVLGCIFAGAVHDYFSGMLSIRNNGESVPSLAGKYLGKGAKHFMNVFAIILLLLVGVVFISAPAGLLAKLTGWDLSIF
VGIIFVYYLLATIVPVDKIIGRLYPFFGALLVFMSVGLTIALIVSSEHTLLPGVEAGDFLTNLNPNDMPLWPALFITIAC
GAISGFHATQSPLMARCVENESNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLNAGMAGNPANVVYEASTGLLGAVG
GFLAVLGVIVLPITSGDTAFRSARLILAEFFKMPQTELPKRLMFAIPLFVAGALLTQVDFGVIWRYFGVANQATAVMMLW
TASAYLLRHNKFHWICTAPAMFMTTVVISFLLSSPTLGAGLPMTISTVAGIVSTLIIAGLIIVKTKGKGEIEVVAEEA

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=551, Percent_Identity=25.7713248638838, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI87082431, Length=329, Percent_Identity=28.8753799392097, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 51058; Mature: 50926

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWFFLCIGLLIGGYFIYGAFVEKVFGINTKRQTPAFTKTDGVDYVPISKGKVYLIQLLN
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHHH
IAGVGPIFGPILGALYGPAAMLWIVLGCIFAGAVHDYFSGMLSIRNNGESVPSLAGKYLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
KGAKHFMNVFAIILLLLVGVVFISAPAGLLAKLTGWDLSIFVGIIFVYYLLATIVPVDKI
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IGRLYPFFGALLVFMSVGLTIALIVSSEHTLLPGVEAGDFLTNLNPNDMPLWPALFITIA
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHH
CGAISGFHATQSPLMARCVENESNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLNAG
HHHHCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
MAGNPANVVYEASTGLLGAVGGFLAVLGVIVLPITSGDTAFRSARLILAEFFKMPQTELP
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHH
KRLMFAIPLFVAGALLTQVDFGVIWRYFGVANQATAVMMLWTASAYLLRHNKFHWICTAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCH
AMFMTTVVISFLLSSPTLGAGLPMTISTVAGIVSTLIIAGLIIVKTKGKGEIEVVAEEA
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECC
>Mature Secondary Structure 
TWFFLCIGLLIGGYFIYGAFVEKVFGINTKRQTPAFTKTDGVDYVPISKGKVYLIQLLN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEHHHHHH
IAGVGPIFGPILGALYGPAAMLWIVLGCIFAGAVHDYFSGMLSIRNNGESVPSLAGKYLG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
KGAKHFMNVFAIILLLLVGVVFISAPAGLLAKLTGWDLSIFVGIIFVYYLLATIVPVDKI
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IGRLYPFFGALLVFMSVGLTIALIVSSEHTLLPGVEAGDFLTNLNPNDMPLWPALFITIA
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHH
CGAISGFHATQSPLMARCVENESNGRFVFYGAMIGEGIIALIWCAIALSFFGGVEGLNAG
HHHHCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
MAGNPANVVYEASTGLLGAVGGFLAVLGVIVLPITSGDTAFRSARLILAEFFKMPQTELP
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHH
KRLMFAIPLFVAGALLTQVDFGVIWRYFGVANQATAVMMLWTASAYLLRHNKFHWICTAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCH
AMFMTTVVISFLLSSPTLGAGLPMTISTVAGIVSTLIIAGLIIVKTKGKGEIEVVAEEA
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]