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The map label for this gene is yehU [H]

Identifier: 167623495

GI number: 167623495

Start: 1884032

End: 1885705

Strand: Reverse

Name: yehU [H]

Synonym: Shal_1564

Alternate gene names: 167623495

Gene position: 1885705-1884032 (Counterclockwise)

Preceding gene: 167623497

Following gene: 167623494

Centisome position: 36.08

GC content: 44.44

Gene sequence:

>1674_bases
ATGTCGCTAATTTTGTTACTTACACAGCAGATGAGCCTGTATATGGTAATTGTTTACCTTGTGAGTAAAACTCCCTTCTT
TAAAGTCTTCACCGAAGCCGCGACTCGCTTACCACATAAAATTTATATCTATTTCATTTTCTCAGGCTTTTGCATCATGG
CCACCTACTTTGGTGAGCAAACCAATGACGCCATTGCCAATACTCGAGCGATGGGCGCCGTACTCGGAGGATTACTCGGA
GGCCCCGTCACAGGCTTATTAGTTGGCCTGACGGGCGGATTACACCGTTACAGCATGGGTGGTTTTACCGATTTGGCCTG
TGCTATCTCTACAACACTAGAAGGTTTTTCTGCGGGCTTATTTAGCTACTATCTACGTAGAATTGGCCAACAGGAGCTTA
TCTATTCGCCACTGATGGTATGCATCATTACCTTTGCAGCCGAAGTCATGCAGATGCTAATTATTTTGTTGGTAGCAAAA
CCATTTACTGACGCTTGGGTTTTAGTGGAACAAATTGCGCTACCAATGCTACTGATTAACTCCATAGGTGCAGCGCTATT
TATGAGCATTATCCGCGACCAAAAAGCCATGTATGACAAGATGTCATCGGTATTTTCGACCCAATCTCTACGTATTGCAG
AGCGGAGTGTTGGTATTCTATCTACCGGATTTAACGAAGAAACAAGCAAGCAAGTGGCACAAATTGTAATCGAGGAAACC
CAAGTCGGCGCAGTTGCAATCACCGACACTGAAAAGCTTCTAGCCTTTATCGGCATTGGTGACGATCACCATATCGCTGG
CACTCCTATCTCTTCGAAAATAACTCAAGATGCCATTGAGCAAGACAGAGTCATGTTCGCAGATGGTGTCAATGTCCCCT
ACTCCTGCTCAATATCAAACAATTGTCAGCTAGGGTCCAGCTTAGTGATCCCGCTTAGATCTGATGCCGAAGTCATCGGA
ACCATCAAACTGTACGAGCCGAAGAAAAAGCTGTTTCTCAATATCAATAAAACCTTAGGCGAAGGTCTCGGCCGACTACT
ATCAAACCAGATCCTTTATGGCCGCTTTGCCGCTCAGCAAAACTTACTCACTCAAGCCGAGCTTAAATTATTGCAGGCTC
AAGTAAATCCACACTTTTTATTTAATGCCTTAAATACTATCGCAGCAATTATCCGCCGCGATCCCGATACGGCGCGTCAA
CTTATTCAGAATCTATCACAATTTTTGCGGATCAACTTAAAACGCACCACAGGCCTCGTCACGCTAGCCGACGAACTTGA
GCATATCGACTCCTACCTGACTATCGAAAAAGCACGCTTTATCGATAAGTTAACGGTCAATATCGATATTCCAAAATCTT
TATTGCACTGCAAACTTCCTGCCTTTACCCTGCAGCCAATCATCGAGAATGCGGTCAAACACGGCACTTCAAACATGCTA
AGTTCAGGCATCATCACGGTTAAAGGTGAGCAACTCCCCGATGAGACATTACTGCTTTCTGTCACAGACAATGCAGGCCT
TTATAAACCCAAGACCGATAGCGAAGGGTTAGGCATGAATATCGTCGATAAGCGAATTCAAAACATGTTTGGCGCTCAGT
TCGGTATTGCCATTGAGTTTGAGCCGAACCAATACACTACAATCAGTATTCACCTACCTATAATGGGATCTTAA

Upstream 100 bases:

>100_bases
TGATTTTGCATAAACCGCGTAAACTAGCTATCGGCAGCTTCGTTGATGATAACCAAGTCTATACAGCTAATATCACATTA
CTATTCAAAGTGAGTTTTTC

Downstream 100 bases:

>100_bases
ACCTTGATTAGCTGCATCATAATTGACGACGAACCTTACGCCAGAGACGAGCTTGCGATTTTGCTTGAGAATGAACCTGA
CTTTGAAGTGTTAGCTCAAT

Product: signal transduction histidine kinase LytS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MSLILLLTQQMSLYMVIVYLVSKTPFFKVFTEAATRLPHKIYIYFIFSGFCIMATYFGEQTNDAIANTRAMGAVLGGLLG
GPVTGLLVGLTGGLHRYSMGGFTDLACAISTTLEGFSAGLFSYYLRRIGQQELIYSPLMVCIITFAAEVMQMLIILLVAK
PFTDAWVLVEQIALPMLLINSIGAALFMSIIRDQKAMYDKMSSVFSTQSLRIAERSVGILSTGFNEETSKQVAQIVIEET
QVGAVAITDTEKLLAFIGIGDDHHIAGTPISSKITQDAIEQDRVMFADGVNVPYSCSISNNCQLGSSLVIPLRSDAEVIG
TIKLYEPKKKLFLNINKTLGEGLGRLLSNQILYGRFAAQQNLLTQAELKLLQAQVNPHFLFNALNTIAAIIRRDPDTARQ
LIQNLSQFLRINLKRTTGLVTLADELEHIDSYLTIEKARFIDKLTVNIDIPKSLLHCKLPAFTLQPIIENAVKHGTSNML
SSGIITVKGEQLPDETLLLSVTDNAGLYKPKTDSEGLGMNIVDKRIQNMFGAQFGIAIEFEPNQYTTISIHLPIMGS

Sequences:

>Translated_557_residues
MSLILLLTQQMSLYMVIVYLVSKTPFFKVFTEAATRLPHKIYIYFIFSGFCIMATYFGEQTNDAIANTRAMGAVLGGLLG
GPVTGLLVGLTGGLHRYSMGGFTDLACAISTTLEGFSAGLFSYYLRRIGQQELIYSPLMVCIITFAAEVMQMLIILLVAK
PFTDAWVLVEQIALPMLLINSIGAALFMSIIRDQKAMYDKMSSVFSTQSLRIAERSVGILSTGFNEETSKQVAQIVIEET
QVGAVAITDTEKLLAFIGIGDDHHIAGTPISSKITQDAIEQDRVMFADGVNVPYSCSISNNCQLGSSLVIPLRSDAEVIG
TIKLYEPKKKLFLNINKTLGEGLGRLLSNQILYGRFAAQQNLLTQAELKLLQAQVNPHFLFNALNTIAAIIRRDPDTARQ
LIQNLSQFLRINLKRTTGLVTLADELEHIDSYLTIEKARFIDKLTVNIDIPKSLLHCKLPAFTLQPIIENAVKHGTSNML
SSGIITVKGEQLPDETLLLSVTDNAGLYKPKTDSEGLGMNIVDKRIQNMFGAQFGIAIEFEPNQYTTISIHLPIMGS
>Mature_556_residues
SLILLLTQQMSLYMVIVYLVSKTPFFKVFTEAATRLPHKIYIYFIFSGFCIMATYFGEQTNDAIANTRAMGAVLGGLLGG
PVTGLLVGLTGGLHRYSMGGFTDLACAISTTLEGFSAGLFSYYLRRIGQQELIYSPLMVCIITFAAEVMQMLIILLVAKP
FTDAWVLVEQIALPMLLINSIGAALFMSIIRDQKAMYDKMSSVFSTQSLRIAERSVGILSTGFNEETSKQVAQIVIEETQ
VGAVAITDTEKLLAFIGIGDDHHIAGTPISSKITQDAIEQDRVMFADGVNVPYSCSISNNCQLGSSLVIPLRSDAEVIGT
IKLYEPKKKLFLNINKTLGEGLGRLLSNQILYGRFAAQQNLLTQAELKLLQAQVNPHFLFNALNTIAAIIRRDPDTARQL
IQNLSQFLRINLKRTTGLVTLADELEHIDSYLTIEKARFIDKLTVNIDIPKSLLHCKLPAFTLQPIIENAVKHGTSNMLS
SGIITVKGEQLPDETLLLSVTDNAGLYKPKTDSEGLGMNIVDKRIQNMFGAQFGIAIEFEPNQYTTISIHLPIMGS

Specific function: Unknown

COG id: COG3275

COG function: function code T; Putative regulator of cell autolysis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788446, Length=553, Percent_Identity=56.4195298372514, Blast_Score=608, Evalue=1e-175,
Organism=Escherichia coli, GI1788723, Length=565, Percent_Identity=27.0796460176991, Blast_Score=233, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR010559
- InterPro:   IPR011620 [H]

Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]

EC number: NA

Molecular weight: Translated: 61242; Mature: 61111

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLILLLTQQMSLYMVIVYLVSKTPFFKVFTEAATRLPHKIYIYFIFSGFCIMATYFGEQ
CCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCC
TNDAIANTRAMGAVLGGLLGGPVTGLLVGLTGGLHRYSMGGFTDLACAISTTLEGFSAGL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHH
FSYYLRRIGQQELIYSPLMVCIITFAAEVMQMLIILLVAKPFTDAWVLVEQIALPMLLIN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SIGAALFMSIIRDQKAMYDKMSSVFSTQSLRIAERSVGILSTGFNEETSKQVAQIVIEET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHC
QVGAVAITDTEKLLAFIGIGDDHHIAGTPISSKITQDAIEQDRVMFADGVNVPYSCSISN
CCCEEEEECHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCEEECCCC
NCQLGSSLVIPLRSDAEVIGTIKLYEPKKKLFLNINKTLGEGLGRLLSNQILYGRFAAQQ
CCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHH
NLLTQAELKLLQAQVNPHFLFNALNTIAAIIRRDPDTARQLIQNLSQFLRINLKRTTGLV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHHCCEE
TLADELEHIDSYLTIEKARFIDKLTVNIDIPKSLLHCKLPAFTLQPIIENAVKHGTSNML
EEHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHH
SSGIITVKGEQLPDETLLLSVTDNAGLYKPKTDSEGLGMNIVDKRIQNMFGAQFGIAIEF
HCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
EPNQYTTISIHLPIMGS
CCCCEEEEEEEEEECCC
>Mature Secondary Structure 
SLILLLTQQMSLYMVIVYLVSKTPFFKVFTEAATRLPHKIYIYFIFSGFCIMATYFGEQ
CEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCC
TNDAIANTRAMGAVLGGLLGGPVTGLLVGLTGGLHRYSMGGFTDLACAISTTLEGFSAGL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHH
FSYYLRRIGQQELIYSPLMVCIITFAAEVMQMLIILLVAKPFTDAWVLVEQIALPMLLIN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SIGAALFMSIIRDQKAMYDKMSSVFSTQSLRIAERSVGILSTGFNEETSKQVAQIVIEET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHC
QVGAVAITDTEKLLAFIGIGDDHHIAGTPISSKITQDAIEQDRVMFADGVNVPYSCSISN
CCCEEEEECHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCEEECCCC
NCQLGSSLVIPLRSDAEVIGTIKLYEPKKKLFLNINKTLGEGLGRLLSNQILYGRFAAQQ
CCCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHH
NLLTQAELKLLQAQVNPHFLFNALNTIAAIIRRDPDTARQLIQNLSQFLRINLKRTTGLV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHHCCEE
TLADELEHIDSYLTIEKARFIDKLTVNIDIPKSLLHCKLPAFTLQPIIENAVKHGTSNML
EEHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHH
SSGIITVKGEQLPDETLLLSVTDNAGLYKPKTDSEGLGMNIVDKRIQNMFGAQFGIAIEF
HCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEE
EPNQYTTISIHLPIMGS
CCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]