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The map label for this gene is lafA [H]

Identifier: 167623370

GI number: 167623370

Start: 1736714

End: 1737532

Strand: Direct

Name: lafA [H]

Synonym: Shal_1439

Alternate gene names: 167623370

Gene position: 1736714-1737532 (Clockwise)

Preceding gene: 167623369

Following gene: 167623371

Centisome position: 33.23

GC content: 45.3

Gene sequence:

>819_bases
ATGGCTATTACAGTAAATACAAACGTGACTTCGATGAAAGCGCAAAAGAACTTGAATGCTTCTAGCCAAAACTTGGCTAC
CTCAATGGAGCGTTTATCAAGTGGTCTTCGCATTAACAGTGCGAAAGACGATGCTGCGGGTCTTGCCATCTCTAACCGTT
TAGACTCACAGGTTCGTGGTCTAGATGTCGGTATGCGTAATGCCAACGATGCCATTTCGATTGCGCAAATTTCAGAAGGT
GCGATGCAGGAGCAAACAAACATGCTTCAGCGTATGCGTGACCTGACTATTCAGGCTTCTAACGGTGCCAACAGCAGTGA
CGATATTGCCTCTATTAAAAAAGAGATCGATGCCCTAGCGGGCGAAATTACCTCAATTGGTAATACCACTGCATTTGGTA
ACACTAAGCTGATGAATGGTGACTTCTCTGCGGGTAAGAGCTTCCAGGTAGGACATCAAAAAGGCGAAGACATTACGGTA
AAAGTACAAAAAGTTAATGCGAGTTCGTTAGCGGTAGGTTCATTAACACTTACTAACTCAGCTAACCGTCAGTCAGCTTT
AACTAAAATCGATGCTGCGATTAAAACCATCGATAGTCAGCGCGCTGATTTAGGTGCGGTGCAAAACCGTCTATCCCACA
ACATCAGTAACAGTGCTAACACTCAGGCCAACGTTGCCGATGCAAAGAGCCGTATCGTAGATGTGGACTTTGCAAAAGAA
ACGGCAGCAATGACGAAGAACCAAGTGCTACAGCAAACCGGTTCTGCGATGCTTGCACAGGCGAACCAGTTACCACAAGT
TGCTTTGTCTCTTCTTTAA

Upstream 100 bases:

>100_bases
AAAAAAACGCTGCCGTTAAAGTTACTGTAACCCAATAGACCCGCCTGGCGTAAATAGACAGGCAAGTTTTAAAGCCAGGT
ATTTTTAGAGGAAACAGATT

Downstream 100 bases:

>100_bases
TCGGATTCTCTCTCGCTTGAGAGGGAAGAGTTAAAGCGGTAATTTAAAGGGGAGATTCGTAATGAGTCTCCCTTTGTTGT
TTGTATTACATGACGTTATT

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MAITVNTNVTSMKAQKNLNASSQNLATSMERLSSGLRINSAKDDAAGLAISNRLDSQVRGLDVGMRNANDAISIAQISEG
AMQEQTNMLQRMRDLTIQASNGANSSDDIASIKKEIDALAGEITSIGNTTAFGNTKLMNGDFSAGKSFQVGHQKGEDITV
KVQKVNASSLAVGSLTLTNSANRQSALTKIDAAIKTIDSQRADLGAVQNRLSHNISNSANTQANVADAKSRIVDVDFAKE
TAAMTKNQVLQQTGSAMLAQANQLPQVALSLL

Sequences:

>Translated_272_residues
MAITVNTNVTSMKAQKNLNASSQNLATSMERLSSGLRINSAKDDAAGLAISNRLDSQVRGLDVGMRNANDAISIAQISEG
AMQEQTNMLQRMRDLTIQASNGANSSDDIASIKKEIDALAGEITSIGNTTAFGNTKLMNGDFSAGKSFQVGHQKGEDITV
KVQKVNASSLAVGSLTLTNSANRQSALTKIDAAIKTIDSQRADLGAVQNRLSHNISNSANTQANVADAKSRIVDVDFAKE
TAAMTKNQVLQQTGSAMLAQANQLPQVALSLL
>Mature_271_residues
AITVNTNVTSMKAQKNLNASSQNLATSMERLSSGLRINSAKDDAAGLAISNRLDSQVRGLDVGMRNANDAISIAQISEGA
MQEQTNMLQRMRDLTIQASNGANSSDDIASIKKEIDALAGEITSIGNTTAFGNTKLMNGDFSAGKSFQVGHQKGEDITVK
VQKVNASSLAVGSLTLTNSANRQSALTKIDAAIKTIDSQRADLGAVQNRLSHNISNSANTQANVADAKSRIVDVDFAKET
AAMTKNQVLQQTGSAMLAQANQLPQVALSLL

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Essential for lateral flagellar synthesis and swarming motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=181, Percent_Identity=44.1988950276243, Blast_Score=141, Evalue=5e-35,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 28608; Mature: 28477

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITVNTNVTSMKAQKNLNASSQNLATSMERLSSGLRINSAKDDAAGLAISNRLDSQVRG
CEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LDVGMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQASNGANSSDDIASIKKEIDALA
HHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHH
GEITSIGNTTAFGNTKLMNGDFSAGKSFQVGHQKGEDITVKVQKVNASSLAVGSLTLTNS
HHHHHCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCEEEEEEEECCCCEEEEEEEECCC
ANRQSALTKIDAAIKTIDSQRADLGAVQNRLSHNISNSANTQANVADAKSRIVDVDFAKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEEHHHH
TAAMTKNQVLQQTGSAMLAQANQLPQVALSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AITVNTNVTSMKAQKNLNASSQNLATSMERLSSGLRINSAKDDAAGLAISNRLDSQVRG
EEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH
LDVGMRNANDAISIAQISEGAMQEQTNMLQRMRDLTIQASNGANSSDDIASIKKEIDALA
HHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHH
GEITSIGNTTAFGNTKLMNGDFSAGKSFQVGHQKGEDITVKVQKVNASSLAVGSLTLTNS
HHHHHCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCEEEEEEEECCCCEEEEEEEECCC
ANRQSALTKIDAAIKTIDSQRADLGAVQNRLSHNISNSANTQANVADAKSRIVDVDFAKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEEEEHHHH
TAAMTKNQVLQQTGSAMLAQANQLPQVALSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]