Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623353

Identifier: 167623353

GI number: 167623353

Start: 1720190

End: 1720615

Strand: Reverse

Name: 167623353

Synonym: Shal_1422

Alternate gene names: NA

Gene position: 1720615-1720190 (Counterclockwise)

Preceding gene: 167623354

Following gene: 167623350

Centisome position: 32.92

GC content: 42.72

Gene sequence:

>426_bases
ATGACAAATTTATCTCAACTCCTTAGCTCACAACACCAAGTGTTGACTGAGCTAAATTCGGTTATTAGCCAGGAAAAACA
AGCCTTGCATGCACAGCAAGCCGATGTTTTGTTGTCGTTAGCCAGCACTAAGGCAAACCTATTGGCAAGCCTGAAGCAAA
ATGATGAGATAATTGCGCAGCAGCCCGATCTTGCCTTGTTAAATACAGACCCAGAGTTGTCTCAGCAAGTGAGTCACGCA
AAGGCATTATTGGCCGAGTGCCAACAGCGAAATGCAGAAAATGAATCGTTAATTGAATTGAGTTTAGCCAGCTTAAATCG
ATTTTCACAAGCGTTACAGGTCAGCCGTAACGCGTCTAGCCTGACTTATGATGGTAAAGGCAAAACCTCCAGTATTTCAA
CGCTTGGAAATAATTTAAAAGCGTAA

Upstream 100 bases:

>100_bases
AAATGAGCTTAAAGACTTAAGTTAAGCTGTATCTACTCGCTATAAGCCATAACGGGTCAAAAGCTGCGAACTCAATAGAG
CGAAAATTAACAAGGCCATT

Downstream 100 bases:

>100_bases
AAGAAGGCCCTAGGTTCTAGGTTCTAGGTTCTAGGTTCTAGGTTAAAGCCAAGACGAACGGCCTGCGGCCTTACGACACG
TGACTTCGCCACTACGGAAC

Product: FlgN family protein

Products: NA

Alternate protein names: Flagellar Biosynthetic Protein FlgN; Polar Flagellar FlgN; Polar Flagellar FlgN-Like Protein; Flagellar Biosynthesis/Type III Secretory Pathway Chaperone; Chaperone FlgN

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTNLSQLLSSQHQVLTELNSVISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQQPDLALLNTDPELSQQVSHA
KALLAECQQRNAENESLIELSLASLNRFSQALQVSRNASSLTYDGKGKTSSISTLGNNLKA

Sequences:

>Translated_141_residues
MTNLSQLLSSQHQVLTELNSVISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQQPDLALLNTDPELSQQVSHA
KALLAECQQRNAENESLIELSLASLNRFSQALQVSRNASSLTYDGKGKTSSISTLGNNLKA
>Mature_140_residues
TNLSQLLSSQHQVLTELNSVISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQQPDLALLNTDPELSQQVSHAK
ALLAECQQRNAENESLIELSLASLNRFSQALQVSRNASSLTYDGKGKTSSISTLGNNLKA

Specific function: Unknown

COG id: COG3418

COG function: function code NUO; Flagellar biosynthesis/type III secretory pathway chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15209; Mature: 15078

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLSQLLSSQHQVLTELNSVISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
QPDLALLNTDPELSQQVSHAKALLAECQQRNAENESLIELSLASLNRFSQALQVSRNASS
CCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
LTYDGKGKTSSISTLGNNLKA
CEECCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
TNLSQLLSSQHQVLTELNSVISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
QPDLALLNTDPELSQQVSHAKALLAECQQRNAENESLIELSLASLNRFSQALQVSRNASS
CCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
LTYDGKGKTSSISTLGNNLKA
CEECCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA