Click here to switch to the map view.

The map label for this gene is 167623350

Identifier: 167623350

GI number: 167623350

Start: 1716793

End: 1717962

Strand: Reverse

Name: 167623350

Synonym: Shal_1419

Alternate gene names: NA

Gene position: 1717962-1716793 (Counterclockwise)

Preceding gene: 167623353

Following gene: 167623349

Centisome position: 32.87

GC content: 46.67

Gene sequence:

>1170_bases
ATGAAACCAGCGCAATATTCAATAACCGCACTCGTATGCCTAATGTCATCAATATTGGCATTGCCTGTACAAGCCAAGTG
GATCACCGCAAGTGGCCAAGCAATGATTACCGATAACAATGTCACCCAAGCCAGAGAAGATGCCATACATCAAGCCGTTA
GCTATGCAACATTGCAATCTGGCGCACGCTTTAGTAGCCAGCAAACCGTCAGTAATGGCCAGCTTATCAATGACTCTTTC
ATGTTAGAGCACCAAGCACAGAGCCAGAATATTGAGCTTATCAGCGAACGTATTGAGAATAATGAGATCACCGTTAATGT
TCGCATCGACATTGTTGAACCACTCGATGACACTTGCCAGGGAAACCCGCTTAAAGCAGCAATTTTAATCCCTCAGGCAT
TAATCAAAGACAGAACCCAGCTTAGGGTCGGCAATATCGGACTATTCGAGCAGAACCTTTCAGAACGGTTAGCGCTCATG
TTAGAGCAGCACGCTAGTAATAGCTTTCCACAGACTCATGCCAATGAGCGTTTAGACATAGATCAATCCTTAGTGGATAT
TCGCGGCTATCGCTTACCCAGCTGGCTAAGCGAGATCACCGACAGTCAATATATTCTACTGCCAGAGATCATCGACATAT
CCACTGAAGATTTCACCAGTACTTTAGGGTTATGGGACAATGATCCGATGCGTAACTTTCAAATTCGCGTATCGCTATTT
CACGGCATTAGCGGCGAAAAAATCTGGAGCCAGCAGTACAGCCAAGCCGCCGAGTGGGAGTTTTTGCGCCAGCAAACCGT
CAACTCAAATAGCGAGAACTTTTGGGGATCTGAATACGGTCAGGCAATTGACCAAGTGTTGGCCGAAGTGAGTCGAGATA
TCGACAGCAGCCTAAATTGCCGGCCACTACTCGGTCAGGTGGTCTCTAGACAAACCGATAGGATTATCCTCAATCTCGGT
AGACGCCACGGCATTCGAGTCGGCGACAAATTACAGCTGGTATTACAACAAAATATGCCCGATAGACTCGATAATATGCG
CGCGGTTGCAGGCAAAAGCAAAGCGACTATCACCATAGACCAAGTGACCGAGGAGAGTGCGACTGCTGTACTCGATGGTA
TGGCAGCATCACTGAATATCCAAATCAACGACTTAGCCATAAAGCTATAA

Upstream 100 bases:

>100_bases
AATGCCTATACAAAAATCAATGCAAAAACGATGCAAAAAGCCTTTTAAAAATACTATGTAAAAAATATGTCATCAATTTC
TCGACTACTGGAAAGGTAAG

Downstream 100 bases:

>100_bases
GTTGGGCTTGCTTGCCTCTATAACGAACAGCAATCTCAAACTGAAGGCTAAAATTGAAGGCTTATAGTTGCGGGCTATAG
TTGCGGGCTATAGTTGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKPAQYSITALVCLMSSILALPVQAKWITASGQAMITDNNVTQAREDAIHQAVSYATLQSGARFSSQQTVSNGQLINDSF
MLEHQAQSQNIELISERIENNEITVNVRIDIVEPLDDTCQGNPLKAAILIPQALIKDRTQLRVGNIGLFEQNLSERLALM
LEQHASNSFPQTHANERLDIDQSLVDIRGYRLPSWLSEITDSQYILLPEIIDISTEDFTSTLGLWDNDPMRNFQIRVSLF
HGISGEKIWSQQYSQAAEWEFLRQQTVNSNSENFWGSEYGQAIDQVLAEVSRDIDSSLNCRPLLGQVVSRQTDRIILNLG
RRHGIRVGDKLQLVLQQNMPDRLDNMRAVAGKSKATITIDQVTEESATAVLDGMAASLNIQINDLAIKL

Sequences:

>Translated_389_residues
MKPAQYSITALVCLMSSILALPVQAKWITASGQAMITDNNVTQAREDAIHQAVSYATLQSGARFSSQQTVSNGQLINDSF
MLEHQAQSQNIELISERIENNEITVNVRIDIVEPLDDTCQGNPLKAAILIPQALIKDRTQLRVGNIGLFEQNLSERLALM
LEQHASNSFPQTHANERLDIDQSLVDIRGYRLPSWLSEITDSQYILLPEIIDISTEDFTSTLGLWDNDPMRNFQIRVSLF
HGISGEKIWSQQYSQAAEWEFLRQQTVNSNSENFWGSEYGQAIDQVLAEVSRDIDSSLNCRPLLGQVVSRQTDRIILNLG
RRHGIRVGDKLQLVLQQNMPDRLDNMRAVAGKSKATITIDQVTEESATAVLDGMAASLNIQINDLAIKL
>Mature_389_residues
MKPAQYSITALVCLMSSILALPVQAKWITASGQAMITDNNVTQAREDAIHQAVSYATLQSGARFSSQQTVSNGQLINDSF
MLEHQAQSQNIELISERIENNEITVNVRIDIVEPLDDTCQGNPLKAAILIPQALIKDRTQLRVGNIGLFEQNLSERLALM
LEQHASNSFPQTHANERLDIDQSLVDIRGYRLPSWLSEITDSQYILLPEIIDISTEDFTSTLGLWDNDPMRNFQIRVSLF
HGISGEKIWSQQYSQAAEWEFLRQQTVNSNSENFWGSEYGQAIDQVLAEVSRDIDSSLNCRPLLGQVVSRQTDRIILNLG
RRHGIRVGDKLQLVLQQNMPDRLDNMRAVAGKSKATITIDQVTEESATAVLDGMAASLNIQINDLAIKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43489; Mature: 43489

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAQYSITALVCLMSSILALPVQAKWITASGQAMITDNNVTQAREDAIHQAVSYATLQS
CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHC
GARFSSQQTVSNGQLINDSFMLEHQAQSQNIELISERIENNEITVNVRIDIVEPLDDTCQ
CCCCCCCCCCCCCCEECCHHEEEHHCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCC
GNPLKAAILIPQALIKDRTQLRVGNIGLFEQNLSERLALMLEQHASNSFPQTHANERLDI
CCCEEEEEECHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
DQSLVDIRGYRLPSWLSEITDSQYILLPEIIDISTEDFTSTLGLWDNDPMRNFQIRVSLF
HHHHHHHCCCCCHHHHHHHCCCCEEEECHHHCCCCHHHHHHCCCCCCCCCCCEEEEEEEE
HGISGEKIWSQQYSQAAEWEFLRQQTVNSNSENFWGSEYGQAIDQVLAEVSRDIDSSLNC
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RPLLGQVVSRQTDRIILNLGRRHGIRVGDKLQLVLQQNMPDRLDNMRAVAGKSKATITID
HHHHHHHHCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEE
QVTEESATAVLDGMAASLNIQINDLAIKL
HHCCHHHHHHHHCCEEEEEEEEEEEEEEC
>Mature Secondary Structure
MKPAQYSITALVCLMSSILALPVQAKWITASGQAMITDNNVTQAREDAIHQAVSYATLQS
CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHC
GARFSSQQTVSNGQLINDSFMLEHQAQSQNIELISERIENNEITVNVRIDIVEPLDDTCQ
CCCCCCCCCCCCCCEECCHHEEEHHCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCCC
GNPLKAAILIPQALIKDRTQLRVGNIGLFEQNLSERLALMLEQHASNSFPQTHANERLDI
CCCEEEEEECHHHHHCCCHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
DQSLVDIRGYRLPSWLSEITDSQYILLPEIIDISTEDFTSTLGLWDNDPMRNFQIRVSLF
HHHHHHHCCCCCHHHHHHHCCCCEEEECHHHCCCCHHHHHHCCCCCCCCCCCEEEEEEEE
HGISGEKIWSQQYSQAAEWEFLRQQTVNSNSENFWGSEYGQAIDQVLAEVSRDIDSSLNC
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
RPLLGQVVSRQTDRIILNLGRRHGIRVGDKLQLVLQQNMPDRLDNMRAVAGKSKATITID
HHHHHHHHCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEE
QVTEESATAVLDGMAASLNIQINDLAIKL
HHCCHHHHHHHHCCEEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA