Click here to switch to the map view.

The map label for this gene is yfgL [H]

Identifier: 167623302

GI number: 167623302

Start: 1645115

End: 1646302

Strand: Direct

Name: yfgL [H]

Synonym: Shal_1370

Alternate gene names: 167623302

Gene position: 1645115-1646302 (Clockwise)

Preceding gene: 167623301

Following gene: 167623303

Centisome position: 31.47

GC content: 46.89

Gene sequence:

>1188_bases
ATGAAGTCTTGGTGCAAAACACTGCTCGCATGTGGCATGAGCATAGGCATGTTATCGGCCTGTTCATCTAGTGATGTGGA
AGAAGAGCCGATCACACCACTTAGCGAGATTGAAGCTAGCGTGTTCCCTGAAGTTAGCTGGAGTGCGAATGTGGGTGATG
GGGTAGGCGATTATTATTCTCGTCTGCGTCCAGAAGCTCGTTATGACAAACTGTTCGTTGCGGACCGTTACGGTAAGGTC
GAAGCATTCGATGAAGTAACGGGTGAACGTGTTTGGCAAAATGACTTTAGCTCTGCATTTAGAGATAATGCTCTAGCCAA
AAACAAAGGCGCACGTTTGGCAGGCGGTGTTACCGCTGCACGTAACAAGGTATTTGTGGGTGGAGAAAGCGGCCTGTTAG
CAGCATTTGATGAAGCGACAGGTGAAGCCGTTTGGCATGTTATTGCCGGTGGTGAGCTGTTATCGGCACCTACGGTTGGT
GAAGACGTCGTTGTGGTCAACACTGGTGCGGGTACCTTAGAAGCGTTTGACGTGGAAGATGGTACTCTGCAGTGGGTTTA
TGAGAATCAACTCCCCACCCTGACCCTACGTGGTACAGGTTCAGCTTCATATGAAGCCGGTGGATTCTTTGTTGGCACTG
CTGATGGTAAAATTGCCGTAGTGATTAAAAACAATGGTCAAGCTGCTTGGGAGCAAGCTATCTACACGCCATCGGGAGGC
AATGAGTTCTCGCGTATGGCCGATGTTGATATGAAGCCGTTGTTAGTAGGCGAAAATCTATACGCTGTTAGTTATAATGG
TAATCTAGTTTCAATGGAAATGCGTACAGGCCGTATCGTTTGGTCACGTAGTTATTCAAGCTTCCATGAACTGGCTTATT
CGGGCGCAAGCCTATTTGTGGTCGACGATCACAGCCGCATTTATTCTGTTGATAGACGAAATGGTCTAGAGTTATGGAAT
AATGCAGAACTTGCTAACCGTAATTTAACCGCGCCAGTCGTGTTTAAAGATTACGTGGTAGTGGGTGATTTTGAGGGGTA
TCTTCACTTCTTAAATAAGTCTGACGGTCAAATTGTTGGACGTGTAGAAGTCGATAGCTCTGGTTTATACAGTCAGCCAT
TGGTCGTTAATGACAACCTATATGTGCAGACTCGTGGTGGACAAGTGGTTCGAGTAACACTTCCGTAA

Upstream 100 bases:

>100_bases
AGGTTGCCTATCAAACTGCGGTAGACAATGGTGGCACTATGACGAGTCCAGCATTACAAATGAAGCTTGATAATCTGAAC
AAGGCATAAGGAATCTGCCC

Downstream 100 bases:

>100_bases
GCCAAGTCGTTAGAGATGATAAGGCCCCTGGATGTGTATCTGGGGGCTTTTTAGTTATTAGAAATAGAGTAATAGAGGCA
ATTAAATGATTCCTGTTGTG

Product: outer membrane protein assembly complex subunit YfgL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKSWCKTLLACGMSIGMLSACSSSDVEEEPITPLSEIEASVFPEVSWSANVGDGVGDYYSRLRPEARYDKLFVADRYGKV
EAFDEVTGERVWQNDFSSAFRDNALAKNKGARLAGGVTAARNKVFVGGESGLLAAFDEATGEAVWHVIAGGELLSAPTVG
EDVVVVNTGAGTLEAFDVEDGTLQWVYENQLPTLTLRGTGSASYEAGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPSGG
NEFSRMADVDMKPLLVGENLYAVSYNGNLVSMEMRTGRIVWSRSYSSFHELAYSGASLFVVDDHSRIYSVDRRNGLELWN
NAELANRNLTAPVVFKDYVVVGDFEGYLHFLNKSDGQIVGRVEVDSSGLYSQPLVVNDNLYVQTRGGQVVRVTLP

Sequences:

>Translated_395_residues
MKSWCKTLLACGMSIGMLSACSSSDVEEEPITPLSEIEASVFPEVSWSANVGDGVGDYYSRLRPEARYDKLFVADRYGKV
EAFDEVTGERVWQNDFSSAFRDNALAKNKGARLAGGVTAARNKVFVGGESGLLAAFDEATGEAVWHVIAGGELLSAPTVG
EDVVVVNTGAGTLEAFDVEDGTLQWVYENQLPTLTLRGTGSASYEAGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPSGG
NEFSRMADVDMKPLLVGENLYAVSYNGNLVSMEMRTGRIVWSRSYSSFHELAYSGASLFVVDDHSRIYSVDRRNGLELWN
NAELANRNLTAPVVFKDYVVVGDFEGYLHFLNKSDGQIVGRVEVDSSGLYSQPLVVNDNLYVQTRGGQVVRVTLP
>Mature_395_residues
MKSWCKTLLACGMSIGMLSACSSSDVEEEPITPLSEIEASVFPEVSWSANVGDGVGDYYSRLRPEARYDKLFVADRYGKV
EAFDEVTGERVWQNDFSSAFRDNALAKNKGARLAGGVTAARNKVFVGGESGLLAAFDEATGEAVWHVIAGGELLSAPTVG
EDVVVVNTGAGTLEAFDVEDGTLQWVYENQLPTLTLRGTGSASYEAGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPSGG
NEFSRMADVDMKPLLVGENLYAVSYNGNLVSMEMRTGRIVWSRSYSSFHELAYSGASLFVVDDHSRIYSVDRRNGLELWN
NAELANRNLTAPVVFKDYVVVGDFEGYLHFLNKSDGQIVGRVEVDSSGLYSQPLVVNDNLYVQTRGGQVVRVTLP

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=382, Percent_Identity=34.2931937172775, Blast_Score=265, Evalue=5e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 42809; Mature: 42809

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSWCKTLLACGMSIGMLSACSSSDVEEEPITPLSEIEASVFPEVSWSANVGDGVGDYYS
CCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH
RLRPEARYDKLFVADRYGKVEAFDEVTGERVWQNDFSSAFRDNALAKNKGARLAGGVTAA
HCCCCCHHCEEEEEECCCCEEHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEECCEEHH
RNKVFVGGESGLLAAFDEATGEAVWHVIAGGELLSAPTVGEDVVVVNTGAGTLEAFDVED
CCEEEECCCCCEEEEECCCCCCEEEEEEECCEEEECCCCCCCEEEEECCCCCEEEEECCC
GTLQWVYENQLPTLTLRGTGSASYEAGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPSGG
CEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHEEECCCCC
NEFSRMADVDMKPLLVGENLYAVSYNGNLVSMEMRTGRIVWSRSYSSFHELAYSGASLFV
CHHHHHHCCCCCEEEECCCEEEEEECCCEEEEEEECCEEEEECCHHHHHHHHHCCCEEEE
VDDHSRIYSVDRRNGLELWNNAELANRNLTAPVVFKDYVVVGDFEGYLHFLNKSDGQIVG
EECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHEEEEECCCCCEEEE
RVEVDSSGLYSQPLVVNDNLYVQTRGGQVVRVTLP
EEEECCCCCCCCCEEECCCEEEEECCCEEEEEECC
>Mature Secondary Structure
MKSWCKTLLACGMSIGMLSACSSSDVEEEPITPLSEIEASVFPEVSWSANVGDGVGDYYS
CCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH
RLRPEARYDKLFVADRYGKVEAFDEVTGERVWQNDFSSAFRDNALAKNKGARLAGGVTAA
HCCCCCHHCEEEEEECCCCEEHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEECCEEHH
RNKVFVGGESGLLAAFDEATGEAVWHVIAGGELLSAPTVGEDVVVVNTGAGTLEAFDVED
CCEEEECCCCCEEEEECCCCCCEEEEEEECCEEEECCCCCCCEEEEECCCCCEEEEECCC
GTLQWVYENQLPTLTLRGTGSASYEAGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPSGG
CEEEEEEECCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHEEECCCCC
NEFSRMADVDMKPLLVGENLYAVSYNGNLVSMEMRTGRIVWSRSYSSFHELAYSGASLFV
CHHHHHHCCCCCEEEECCCEEEEEECCCEEEEEEECCEEEEECCHHHHHHHHHCCCEEEE
VDDHSRIYSVDRRNGLELWNNAELANRNLTAPVVFKDYVVVGDFEGYLHFLNKSDGQIVG
EECCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHEEEEECCCCCEEEE
RVEVDSSGLYSQPLVVNDNLYVQTRGGQVVRVTLP
EEEECCCCCCCCCEEECCCEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]