| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is engA
Identifier: 167623303
GI number: 167623303
Start: 1646388
End: 1647860
Strand: Direct
Name: engA
Synonym: Shal_1371
Alternate gene names: 167623303
Gene position: 1646388-1647860 (Clockwise)
Preceding gene: 167623302
Following gene: 167623304
Centisome position: 31.5
GC content: 48.2
Gene sequence:
>1473_bases ATGATTCCTGTTGTGGCCCTTGTAGGGCGACCAAACGTTGGTAAGTCGACCCTTTTTAACCGACTTACCCGTACTAGAGA TGCGCTTGTCGCTGACTTTCCTGGGCTAACTCGGGATCGTAAATACGGCCGAGCACATCTTGCAGGTTATGAGTTTATCG TAGTTGATACTGGCGGTATCGACGGCACCGAAGAAGGGATTGAAACTCGCATGGCCGAGCAATCTCTAGCGGCAATTGAA GAAGCGGATGTTGTGCTGTTTCTTACCGATGCCCGTGCTGGTCTAACTGCTGCCGATCTTGCGATTGCTCAACATTTACG TAGCCGTGAAAAAACCACCTTTGTTGTTGCTAACAAGGTTGATGGTATCGATGCGGATTCAGCTTGTGCCGAATTTTGGT CATTAGGTCTAGGTGAAGTTTACCAAATGGCTGCGGCTCAGGGCCGCGGCGTGACCAACATGATCGAGTATTCTTTAGCG CCATACGCAGAAGCGATGGGTATCGTTAAGCAAGAAGACGGTGATGATGACGAAGAAGAGCGTGAGTTCACCGAAGAAGA AGCGGAAGCTGAGCAGAAACGTCTGCAAGACTTGCCAATTAAGCTTGCTATCATTGGTAAGCCAAACGTAGGTAAGTCAA CGTTAACTAACCGTATCTTAGGTGAAGAGCGCGTTGTAGTTTATGACGAGCCTGGCACGACTCGCGACAGTATTTACATT CCTATGGAACGTCAAGGCCGTGAGTACGTATTGATTGACACCGCAGGTGTTCGTCGTCGTAGCAAGGTGCATGAAACCGT TGAGAAATTCTCGGTGATTAAGACCCTTAAAGCGGTTGAAGACAGTAACGTGGTATTGCTGGTTATCGATGCCCGTGAAG GTATTGCTGAGCAAGACTTAGGTCTATTAGGTTTCGTGCTAAACGCGGGCCGCGCATTGGTTATTGCCGTTAACAAGTGG GACGGTATTGATCAGAATGTTAAAGACAGAGTGAAGACTGAACTTGATCGCCGTTTAGGCTTTATCGATTTCGCCCGTAT TCACTTTATCTCTGCACTGCACGGTACTGGTGTGGGTCACTTGTTTGAGTCAATCGAAGAAGCGTATGACAGTGCGACGC GCCGTGTAAGTACATCAATGCTGACTCGTATCATGCAGATGTCTCAAGACGATCACCAGCCACCGTTGGTTAACGGTCGC CGTGTTAAGCTTAAATACGCTCACGCTGGTGGTTACAACCCTCCAATCGTGGTTGTACACGGTAACCAGGTTAAGAAGCT TCCAGACTCTTACAAGCGTTATATGATGAACTACTTCCGTCGTTCATTGAAGGTGATTGGTACGCCAATCCAGTTACGCT TCCAAGAAGGTGGCAACCCGTTTGAGGGCTTGAACACCAAGAAGCTTACTGTGAGCCAAGAGCGACGTCGTAAGCGTATG GTTGGCCATATTCGCGATAAGAATAAGGATTAA
Upstream 100 bases:
>100_bases GTAACACTTCCGTAAGCCAAGTCGTTAGAGATGATAAGGCCCCTGGATGTGTATCTGGGGGCTTTTTAGTTATTAGAAAT AGAGTAATAGAGGCAATTAA
Downstream 100 bases:
>100_bases CTCTTTTGCTGATTAGCAAATAGTTAAAGTAATTTACAAAAGGAACCTCAGGGTTCCTTTTTTGTTTATATATTGAGTTG ATTTTAATTTGTTATTTTTA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGIDGTEEGIETRMAEQSLAAIE EADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANKVDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA PYAEAMGIVKQEDGDDDEEEREFTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYI PMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFVLNAGRALVIAVNKW DGIDQNVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGR RVKLKYAHAGGYNPPIVVVHGNQVKKLPDSYKRYMMNYFRRSLKVIGTPIQLRFQEGGNPFEGLNTKKLTVSQERRRKRM VGHIRDKNKD
Sequences:
>Translated_490_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGIDGTEEGIETRMAEQSLAAIE EADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANKVDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA PYAEAMGIVKQEDGDDDEEEREFTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYI PMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFVLNAGRALVIAVNKW DGIDQNVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGR RVKLKYAHAGGYNPPIVVVHGNQVKKLPDSYKRYMMNYFRRSLKVIGTPIQLRFQEGGNPFEGLNTKKLTVSQERRRKRM VGHIRDKNKD >Mature_490_residues MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGIDGTEEGIETRMAEQSLAAIE EADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANKVDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLA PYAEAMGIVKQEDGDDDEEEREFTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYI PMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFVLNAGRALVIAVNKW DGIDQNVKDRVKTELDRRLGFIDFARIHFISALHGTGVGHLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGR RVKLKYAHAGGYNPPIVVVHGNQVKKLPDSYKRYMMNYFRRSLKVIGTPIQLRFQEGGNPFEGLNTKKLTVSQERRRKRM VGHIRDKNKD
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=494, Percent_Identity=72.2672064777328, Blast_Score=720, Evalue=0.0, Organism=Escherichia coli, GI2367268, Length=103, Percent_Identity=36.8932038834951, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=144, Percent_Identity=32.6388888888889, Blast_Score=77, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_SHEHH (B0TLI8)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673597.1 - ProteinModelPortal: B0TLI8 - SMR: B0TLI8 - GeneID: 5906952 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1371 - HOGENOM: HBG592135 - OMA: TRDRTYQ - ProtClustDB: PRK00093 - BioCyc: SHAL458817:SHAL_1371-MONOMER - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 54730; Mature: 54730
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCEEEEEEECCCC DGTEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANKV CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECC DGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLAPYAEAMGIVKQEDGDDDEEE CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHH REFTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYI HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEE PMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGIAEQDL EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCC GLLGFVLNAGRALVIAVNKWDGIDQNVKDRVKTELDRRLGFIDFARIHFISALHGTGVGH HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH LFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVVH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEE GNQVKKLPDSYKRYMMNYFRRSLKVIGTPIQLRFQEGGNPFEGLNTKKLTVSQERRRKRM CCCHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCHHHHHHHH VGHIRDKNKD HHHHHCCCCC >Mature Secondary Structure MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAHLAGYEFIVVDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCEEEEEEECCCC DGTEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADLAIAQHLRSREKTTFVVANKV CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECC DGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYSLAPYAEAMGIVKQEDGDDDEEE CCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHH REFTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYI HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEE PMERQGREYVLIDTAGVRRRSKVHETVEKFSVIKTLKAVEDSNVVLLVIDAREGIAEQDL EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCC GLLGFVLNAGRALVIAVNKWDGIDQNVKDRVKTELDRRLGFIDFARIHFISALHGTGVGH HHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH LFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVVH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEE GNQVKKLPDSYKRYMMNYFRRSLKVIGTPIQLRFQEGGNPFEGLNTKKLTVSQERRRKRM CCCHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEECCHHHHHHHH VGHIRDKNKD HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA