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The map label for this gene is yfgM [H]

Identifier: 167623301

GI number: 167623301

Start: 1644483

End: 1645103

Strand: Direct

Name: yfgM [H]

Synonym: Shal_1369

Alternate gene names: 167623301

Gene position: 1644483-1645103 (Clockwise)

Preceding gene: 167623300

Following gene: 167623302

Centisome position: 31.46

GC content: 43.64

Gene sequence:

>621_bases
GTGGAAATCTATAGCACAGAAGAGCAACAAGTAGATGCTATCAAACAGTTCTGGAAAGATTACGGCACATCAGTTGTTGT
TGGCGCCGTTGTCGGTTTAGGTGGATTATTCGGTTGGAACTATTATTCTGACTATCAAGTGGCTCAAGCTGAAGCCGCTT
CTGAGTCATTCCAAGCGTTGAGCAACCAAAATAGCTCAGATGCAGCTATGTTAGGCGCTGCAGAAAACTTCGCTAAAGAG
CACGGTCAAAAAGGTTATCAGTCACTACTTGAGCTATTAGTAGCAAAATCAGCAGTGGAAGCCGGCGATTTAGATAAAGC
AGAGACTACGCTAAAGACCGTGATTGCAACCAATGTTGATAACAGCATTGTGCTTATTGCAACGATGCGTTTAGCACGTG
TGCAAGCTGAGAAAGGTCAATACGCGACAGCAATTACCACGCTTGATCAAATTACCGATCCAGCATCAGTAGCTCAAAGA
GATGAGCTAAAAGGTGATTTCTTAGTACGCCAAGGTGAAACAGAAAAGGCAAAGGTTGCCTATCAAACTGCGGTAGACAA
TGGTGGCACTATGACGAGTCCAGCATTACAAATGAAGCTTGATAATCTGAACAAGGCATAA

Upstream 100 bases:

>100_bases
TCGCAGTGAAGCATCTTCGCGAAGATAAAGCACAAGAATTAGTTGCCCGTGATGCGTTGGCGACTTATATTGCAGAACTG
ATTTAAAAGGGGAAGACTAA

Downstream 100 bases:

>100_bases
GGAATCTGCCCATGAAGTCTTGGTGCAAAACACTGCTCGCATGTGGCATGAGCATAGGCATGTTATCGGCCTGTTCATCT
AGTGATGTGGAAGAAGAGCC

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MEIYSTEEQQVDAIKQFWKDYGTSVVVGAVVGLGGLFGWNYYSDYQVAQAEAASESFQALSNQNSSDAAMLGAAENFAKE
HGQKGYQSLLELLVAKSAVEAGDLDKAETTLKTVIATNVDNSIVLIATMRLARVQAEKGQYATAITTLDQITDPASVAQR
DELKGDFLVRQGETEKAKVAYQTAVDNGGTMTSPALQMKLDNLNKA

Sequences:

>Translated_206_residues
MEIYSTEEQQVDAIKQFWKDYGTSVVVGAVVGLGGLFGWNYYSDYQVAQAEAASESFQALSNQNSSDAAMLGAAENFAKE
HGQKGYQSLLELLVAKSAVEAGDLDKAETTLKTVIATNVDNSIVLIATMRLARVQAEKGQYATAITTLDQITDPASVAQR
DELKGDFLVRQGETEKAKVAYQTAVDNGGTMTSPALQMKLDNLNKA
>Mature_206_residues
MEIYSTEEQQVDAIKQFWKDYGTSVVVGAVVGLGGLFGWNYYSDYQVAQAEAASESFQALSNQNSSDAAMLGAAENFAKE
HGQKGYQSLLELLVAKSAVEAGDLDKAETTLKTVIATNVDNSIVLIATMRLARVQAEKGQYATAITTLDQITDPASVAQR
DELKGDFLVRQGETEKAKVAYQTAVDNGGTMTSPALQMKLDNLNKA

Specific function: Unknown

COG id: COG2976

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0070 family [H]

Homologues:

Organism=Escherichia coli, GI1788860, Length=206, Percent_Identity=33.9805825242718, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018704
- InterPro:   IPR011990 [H]

Pfam domain/function: PF09976 DUF2133 [H]

EC number: NA

Molecular weight: Translated: 22171; Mature: 22171

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIYSTEEQQVDAIKQFWKDYGTSVVVGAVVGLGGLFGWNYYSDYQVAQAEAASESFQAL
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SNQNSSDAAMLGAAENFAKEHGQKGYQSLLELLVAKSAVEAGDLDKAETTLKTVIATNVD
HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
NSIVLIATMRLARVQAEKGQYATAITTLDQITDPASVAQRDELKGDFLVRQGETEKAKVA
CCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHHHH
YQTAVDNGGTMTSPALQMKLDNLNKA
HHHHCCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MEIYSTEEQQVDAIKQFWKDYGTSVVVGAVVGLGGLFGWNYYSDYQVAQAEAASESFQAL
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
SNQNSSDAAMLGAAENFAKEHGQKGYQSLLELLVAKSAVEAGDLDKAETTLKTVIATNVD
HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
NSIVLIATMRLARVQAEKGQYATAITTLDQITDPASVAQRDELKGDFLVRQGETEKAKVA
CCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCHHHHH
YQTAVDNGGTMTSPALQMKLDNLNKA
HHHHCCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 9205837 [H]