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The map label for this gene is yfjD [C]

Identifier: 167623295

GI number: 167623295

Start: 1637763

End: 1638833

Strand: Reverse

Name: yfjD [C]

Synonym: Shal_1363

Alternate gene names: 167623295

Gene position: 1638833-1637763 (Counterclockwise)

Preceding gene: 167623306

Following gene: 167623294

Centisome position: 31.35

GC content: 41.36

Gene sequence:

>1071_bases
ATGATAACTCTTATCATTATAATATTTGTCGCGATTACTGTCTCTTTTCTTTGTAGTGTATTTGAAGCTGTATTGCTTTC
TGTTACACCAAGCTATATTGCCTCGTTAACAAAAACCAACCCAGCTGCTGCTAACAGGTTACGTAAGCAAAAAGAGAACG
TTGAATCTCCTCTCGTTTCAATCCTTACGCTAAACACTATCGCACACACCGTTGGTGCTGCTGTTGCTGGTGCGCAAGCT
GCTAAGGTATTTGGCGATGAGATGCTAGGCGTATTTTCTGGTGTTCTTACCTTCTTAATTCTCTTCTTCTCAGAGATCAT
TCCTAAAACTTTAGGTGCAAACTATTGGCGCTCACTGGCTCCAACCGTATCTATCGCATTGGTTTGGATGGAACGTAGTA
CTTTACCTCTCATTTGGATGTCTAATCAGGTTACTAAGCTGATGGGCAAAGGGGATGAAGGTCAGTATATTCGTCAAGAG
ATGAGTGCAATGGCTGAGATCGGCCGCGCATCTGGAGAGCTTGATGAGCAAGAGTCGAAGATTTTAACTCAAATGCTGTC
AGTTAAAGAGATGCCTGTAACCGCCATCATGACTCCAAGAACAGTCATGTTTAGATTACCTACTGACTTGACTCAAGATG
AGTTTGCCCAGCGATTCATGGCCAAGCCATTTACCCGAATTCCTGTCTATGATGAAGATCCAGATAATATTATTGGTTAC
GTCAATAGAAACGATATTTTGCTTGCTGAACGCTCGACGCCAAAAGAATCAATTGCAGTACTAAAGAGAAGTTTATTGGT
TATCCCTGAGACAGCCAAAATCCTACCTCTTTTTGAGCTAATGATTAAGCGAAATACCAAGATTGCGATGGTAGTTGATG
AATATGGTTCTAACGAAGGTATTGTTACCTTAGAAGATATCGTTGAGTCTCTATTAGGCCTTGAAATTGTCGATTCGAAT
GACCCTGTGGCAGACATGCAGCAATTTGCTCGTAAGCTATGGAGTCGCCGAATGAAAGATAAAGGCATCGTGTTATCTGA
TGATGGCGATTTCGAAAAAGAAAAAAGCTAA

Upstream 100 bases:

>100_bases
ACAAATATTAGCCAGCAGGCTATCACCAAAGTTAAAAACCTGTGCTAGAATCCGCCCAGATTAATTTTGGTCTGCCATTT
GGAGGTGTAATTTCACCTTT

Downstream 100 bases:

>100_bases
ATTTAGCTAACTGAATTGAAAAAAGGGAGCTTAGCTCCCTTTTTTAATCTCTTGCGTTAACGGATGCGTCTATCCGGCAT
TCAGCCAGCCCCCAACTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPAAANRLRKQKENVESPLVSILTLNTIAHTVGAAVAGAQA
AKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLAPTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQE
MSAMAEIGRASGELDEQESKILTQMLSVKEMPVTAIMTPRTVMFRLPTDLTQDEFAQRFMAKPFTRIPVYDEDPDNIIGY
VNRNDILLAERSTPKESIAVLKRSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSNEGIVTLEDIVESLLGLEIVDSN
DPVADMQQFARKLWSRRMKDKGIVLSDDGDFEKEKS

Sequences:

>Translated_356_residues
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPAAANRLRKQKENVESPLVSILTLNTIAHTVGAAVAGAQA
AKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLAPTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQE
MSAMAEIGRASGELDEQESKILTQMLSVKEMPVTAIMTPRTVMFRLPTDLTQDEFAQRFMAKPFTRIPVYDEDPDNIIGY
VNRNDILLAERSTPKESIAVLKRSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSNEGIVTLEDIVESLLGLEIVDSN
DPVADMQQFARKLWSRRMKDKGIVLSDDGDFEKEKS
>Mature_356_residues
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPAAANRLRKQKENVESPLVSILTLNTIAHTVGAAVAGAQA
AKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLAPTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQE
MSAMAEIGRASGELDEQESKILTQMLSVKEMPVTAIMTPRTVMFRLPTDLTQDEFAQRFMAKPFTRIPVYDEDPDNIIGY
VNRNDILLAERSTPKESIAVLKRSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSNEGIVTLEDIVESLLGLEIVDSN
DPVADMQQFARKLWSRRMKDKGIVLSDDGDFEKEKS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=264, Percent_Identity=28.7878787878788, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI145693175, Length=306, Percent_Identity=25.1633986928105, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1790664, Length=337, Percent_Identity=24.9258160237389, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082033, Length=165, Percent_Identity=32.1212121212121, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1786879, Length=174, Percent_Identity=29.8850574712644, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1788119, Length=192, Percent_Identity=23.9583333333333, Blast_Score=62, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324512, Length=250, Percent_Identity=26.4, Blast_Score=79, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 39603; Mature: 39603

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPAAANRLRKQKENVESPLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ILTLNTIAHTVGAAVAGAQAAKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
PTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQEMSAMAEIGRASGELDEQESK
HHHHEEEEEEECCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
ILTQMLSVKEMPVTAIMTPRTVMFRLPTDLTQDEFAQRFMAKPFTRIPVYDEDPDNIIGY
HHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
VNRNDILLAERSTPKESIAVLKRSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSNEG
ECCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
IVTLEDIVESLLGLEIVDSNDPVADMQQFARKLWSRRMKDKGIVLSDDGDFEKEKS
CEEHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MITLIIIIFVAITVSFLCSVFEAVLLSVTPSYIASLTKTNPAAANRLRKQKENVESPLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ILTLNTIAHTVGAAVAGAQAAKVFGDEMLGVFSGVLTFLILFFSEIIPKTLGANYWRSLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
PTVSIALVWMERSTLPLIWMSNQVTKLMGKGDEGQYIRQEMSAMAEIGRASGELDEQESK
HHHHEEEEEEECCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
ILTQMLSVKEMPVTAIMTPRTVMFRLPTDLTQDEFAQRFMAKPFTRIPVYDEDPDNIIGY
HHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
VNRNDILLAERSTPKESIAVLKRSLLVIPETAKILPLFELMIKRNTKIAMVVDEYGSNEG
ECCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
IVTLEDIVESLLGLEIVDSNDPVADMQQFARKLWSRRMKDKGIVLSDDGDFEKEKS
CEEHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]