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The map label for this gene is ybcL [H]

Identifier: 167623217

GI number: 167623217

Start: 1565117

End: 1565644

Strand: Direct

Name: ybcL [H]

Synonym: Shal_1283

Alternate gene names: 167623217

Gene position: 1565117-1565644 (Clockwise)

Preceding gene: 167623216

Following gene: 167623218

Centisome position: 29.94

GC content: 46.59

Gene sequence:

>528_bases
ATGAAACGTCTTACTTTATCTATCGCCTTAATTGCCTTCTCTGCTCATAGTTACGCTTTAGAGTTAACGAGTACAGATAT
CAATGAGGGGCAGTTGATGTCGTCAAAGTTTGAGTACAATGGTATGGGCTGCAGCGGTGGTAACCTTTCGCCTCAGTTGA
GTTGGAGTGATGTGCCTAAAGGGACTGAAAGTTTTGCGATTACCGCATTTGACCCCGATGCACCAACTGGAAGTGGCTGG
TGGCATTGGACCGTACTCAATATTCCTGCAACAACCACATCGTTAGCTCAAGGCGCTTCAGGAAAGTTAAAAGTGGGACA
CGAAACCAGAACCGATTACGGTAAGCCGGGTTATGGTGGAGTCTGTCCGCCAGAGGGGGATGGAATGCATCGCTACCAAT
TTACTATTTGGGCACTTCCTGAGGCTAAAATTGATCTGCCAACGGATATTTCTCCAGCAGTAGTGGGATTCACCCTCAAT
AAAATGGCACTAGATAAGGCGGTATTGACTGCCACTTATGTACGTTAG

Upstream 100 bases:

>100_bases
TAAACTTGTCTTTTAGCGGTTAATGATTGCTGGTGTGAATTTTTGGCCTGTATTTTGGCTAAACTAGATGCATATTCACT
ATGGAATCTAGGATAACAAA

Downstream 100 bases:

>100_bases
TCATTAAAGTATTTAGCTAAATATGATCGTTAGAGGAGAGTAAGATTGGCATCATTGGTTCAGATTGACCGTTTCTATGG
TCAGAAATCACAGCCTTTAC

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKRLTLSIALIAFSAHSYALELTSTDINEGQLMSSKFEYNGMGCSGGNLSPQLSWSDVPKGTESFAITAFDPDAPTGSGW
WHWTVLNIPATTTSLAQGASGKLKVGHETRTDYGKPGYGGVCPPEGDGMHRYQFTIWALPEAKIDLPTDISPAVVGFTLN
KMALDKAVLTATYVR

Sequences:

>Translated_175_residues
MKRLTLSIALIAFSAHSYALELTSTDINEGQLMSSKFEYNGMGCSGGNLSPQLSWSDVPKGTESFAITAFDPDAPTGSGW
WHWTVLNIPATTTSLAQGASGKLKVGHETRTDYGKPGYGGVCPPEGDGMHRYQFTIWALPEAKIDLPTDISPAVVGFTLN
KMALDKAVLTATYVR
>Mature_175_residues
MKRLTLSIALIAFSAHSYALELTSTDINEGQLMSSKFEYNGMGCSGGNLSPQLSWSDVPKGTESFAITAFDPDAPTGSGW
WHWTVLNIPATTTSLAQGASGKLKVGHETRTDYGKPGYGGVCPPEGDGMHRYQFTIWALPEAKIDLPTDISPAVVGFTLN
KMALDKAVLTATYVR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=180, Percent_Identity=48.8888888888889, Blast_Score=175, Evalue=1e-45,
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=47.4683544303797, Blast_Score=150, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18789; Mature: 18789

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLTLSIALIAFSAHSYALELTSTDINEGQLMSSKFEYNGMGCSGGNLSPQLSWSDVPK
CCEEEEEEEEEEEECCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
GTESFAITAFDPDAPTGSGWWHWTVLNIPATTTSLAQGASGKLKVGHETRTDYGKPGYGG
CCCCEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCC
VCPPEGDGMHRYQFTIWALPEAKIDLPTDISPAVVGFTLNKMALDKAVLTATYVR
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECHHHHHHEEEEEEECC
>Mature Secondary Structure
MKRLTLSIALIAFSAHSYALELTSTDINEGQLMSSKFEYNGMGCSGGNLSPQLSWSDVPK
CCEEEEEEEEEEEECCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
GTESFAITAFDPDAPTGSGWWHWTVLNIPATTTSLAQGASGKLKVGHETRTDYGKPGYGG
CCCCEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCC
VCPPEGDGMHRYQFTIWALPEAKIDLPTDISPAVVGFTLNKMALDKAVLTATYVR
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]