| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623083
Identifier: 167623083
GI number: 167623083
Start: 1397379
End: 1398275
Strand: Direct
Name: 167623083
Synonym: Shal_1149
Alternate gene names: NA
Gene position: 1397379-1398275 (Clockwise)
Preceding gene: 167623082
Following gene: 167623084
Centisome position: 26.73
GC content: 47.05
Gene sequence:
>897_bases ATGGGCATGAGCCAGATGAAACAAGAGTCCCTATACATTGGAATCGATGGTGGCGGCAGTAAGTGCCGTGCAACAATTTA CACTCATGATTATCGCATTTTAGGTACGGGTGTCGCAGGACGCGCCAATCCACTTCATGGTTTAGCCCAAACATTTCAAT CAATTGAAGAGTCTACTCAATTGGCACTGACTGATGCGGGTCTTACTCCTGCTGATAGCAAGCGATTAATCGCGGGCCTC GGTTTAGCGGGCGTTAATGTGCCTCGGCTTTATCAAGATATTGCAACTTGGCAGCATCCGTTTGCCAGTATGTATTTGAC TACCGACTTACATACAGCCTGCATTGGAGCGCATCAAGGTCAAGATGGGGCGGTTATTATCACCGGTACAGGCTCTTGTG GTTACGCTCGTGTAGCAGAAAAAGAGCTGTTCTTAGGCGGCCACGGCTTTGCCTTAGGTGATAAGGGAAGTGGTGCTTGG CTTGGACTTAAGGCGAGTGAGAGCGCATTGTTAGATTTAGATGGTTTTGGTGAGAAAACCTTATTAACTCAGCGACTATA TGATTACTTTGAGGTTAATTGTGCATTAGGCATTGTTGAAAACCTCGCAGGGCAGTCATCGAGTACCTACGCCAAGCTTG CTAGAATCGTGTTTGAATGCGCGGCGCAAAACGATGGTGTCGCGCTGGATATTGTTCGTGAAGGCGCAAGTTATATTAGC GAGCTTGCCAGAAAATTATTTGAGCTTAATCCACCACGATTTTCTATGATAGGTGGGCTAGCTGAGCCTCTAGCGTCTTG GTTAGATGAAGATGTCTTAAACGAACTTTCCCCCACTTTACAGCCACCAGAGTGGGGCGCAGCATTTTATGCTCAGCAAC AACATGTTAGCGCTTAA
Upstream 100 bases:
>100_bases GTAACATAAAGTTAACTTGGTGGGTGTTATTCGCGTTATGCGTATATAAAGCCCAGCTCCATTCTGCGCTAAAAGAATGA GAACAATAAAGAGGTCTGTC
Downstream 100 bases:
>100_bases GTGCTGCATACATAGCAAATAGACGAAAAGTTGATACCCAATATACTCCGCCACACTTGAGTAAGTGAGAATAAAATGAA GCAGACGATAATTGCAGATC
Product: BadF/BadG/BcrA/BcrD type ATPase
Products: NA
Alternate protein names: N-Acetylglucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase Family Protein; BadF/BadG/BcrA/BcrD Family ATPase; BadF/BadG/BcrA/BcrD Type ATPase; N-Acetylglucosamine Kinase Protein; BadF/BadG/BcrA/BcrD ATPase Family; ATPase Badf/Badg/Bcra/Bcrd Type; N-Acetylglucosamine Kinase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MGMSQMKQESLYIGIDGGGSKCRATIYTHDYRILGTGVAGRANPLHGLAQTFQSIEESTQLALTDAGLTPADSKRLIAGL GLAGVNVPRLYQDIATWQHPFASMYLTTDLHTACIGAHQGQDGAVIITGTGSCGYARVAEKELFLGGHGFALGDKGSGAW LGLKASESALLDLDGFGEKTLLTQRLYDYFEVNCALGIVENLAGQSSSTYAKLARIVFECAAQNDGVALDIVREGASYIS ELARKLFELNPPRFSMIGGLAEPLASWLDEDVLNELSPTLQPPEWGAAFYAQQQHVSA
Sequences:
>Translated_298_residues MGMSQMKQESLYIGIDGGGSKCRATIYTHDYRILGTGVAGRANPLHGLAQTFQSIEESTQLALTDAGLTPADSKRLIAGL GLAGVNVPRLYQDIATWQHPFASMYLTTDLHTACIGAHQGQDGAVIITGTGSCGYARVAEKELFLGGHGFALGDKGSGAW LGLKASESALLDLDGFGEKTLLTQRLYDYFEVNCALGIVENLAGQSSSTYAKLARIVFECAAQNDGVALDIVREGASYIS ELARKLFELNPPRFSMIGGLAEPLASWLDEDVLNELSPTLQPPEWGAAFYAQQQHVSA >Mature_297_residues GMSQMKQESLYIGIDGGGSKCRATIYTHDYRILGTGVAGRANPLHGLAQTFQSIEESTQLALTDAGLTPADSKRLIAGLG LAGVNVPRLYQDIATWQHPFASMYLTTDLHTACIGAHQGQDGAVIITGTGSCGYARVAEKELFLGGHGFALGDKGSGAWL GLKASESALLDLDGFGEKTLLTQRLYDYFEVNCALGIVENLAGQSSSTYAKLARIVFECAAQNDGVALDIVREGASYISE LARKLFELNPPRFSMIGGLAEPLASWLDEDVLNELSPTLQPPEWGAAFYAQQQHVSA
Specific function: Unknown
COG id: COG2971
COG function: function code G; Predicted N-acetylglucosamine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31793; Mature: 31662
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMSQMKQESLYIGIDGGGSKCRATIYTHDYRILGTGVAGRANPLHGLAQTFQSIEESTQ CCHHHHCCCCEEEEECCCCCEEEEEEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHHHE LALTDAGLTPADSKRLIAGLGLAGVNVPRLYQDIATWQHPFASMYLTTDLHTACIGAHQG EEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHEEEECCHHHHHHCCCCC QDGAVIITGTGSCGYARVAEKELFLGGHGFALGDKGSGAWLGLKASESALLDLDGFGEKT CCCEEEEEECCCCCCHHHHHHHEEECCCCEEECCCCCCCEEEEECCCCEEEECCCCCCHH LLTQRLYDYFEVNCALGIVENLAGQSSSTYAKLARIVFECAAQNDGVALDIVREGASYIS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH ELARKLFELNPPRFSMIGGLAEPLASWLDEDVLNELSPTLQPPEWGAAFYAQQQHVSA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure GMSQMKQESLYIGIDGGGSKCRATIYTHDYRILGTGVAGRANPLHGLAQTFQSIEESTQ CHHHHCCCCEEEEECCCCCEEEEEEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHHHE LALTDAGLTPADSKRLIAGLGLAGVNVPRLYQDIATWQHPFASMYLTTDLHTACIGAHQG EEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHHEEEECCHHHHHHCCCCC QDGAVIITGTGSCGYARVAEKELFLGGHGFALGDKGSGAWLGLKASESALLDLDGFGEKT CCCEEEEEECCCCCCHHHHHHHEEECCCCEEECCCCCCCEEEEECCCCEEEECCCCCCHH LLTQRLYDYFEVNCALGIVENLAGQSSSTYAKLARIVFECAAQNDGVALDIVREGASYIS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH ELARKLFELNPPRFSMIGGLAEPLASWLDEDVLNELSPTLQPPEWGAAFYAQQQHVSA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA