BacMap

Definition	Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession	NC_010334
Length	5,226,917

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The map label for this gene is gabD [H]

Identifier: 167622940

GI number: 167622940

Start: 1230433

End: 1231881

Strand: Direct

Name: gabD [H]

Synonym: Shal_1001

Alternate gene names: 167622940

Gene position: 1230433-1231881 (Clockwise)

Preceding gene: 167622939

Following gene: 167622941

Centisome position: 23.54

GC content: 51.48

Gene sequence:

>1449_bases
GTGCAGTTAAATGATATGAGCTTACTACGCCAGCAATGCTATATAGATGGTCAGTGGCTTGAAGCCATCAACGGTGAGAA
AGTTGAGATAGCCGATCCTGCCACTCATAAAGTGATTGGTAGTGTGCCTGTGATGGGCACCACCGAAACCAAAGCGGCGA
TAACCGCAGCCGAGAAGGCACTACCTGCCTGGCGTGCGTTAACCGCAAAAGAACGTGGCGCCAAGCTGCATCGTTGGTTT
GAGTTACTGCTTGAACATCAAGACGACTTAGCACTGATGATGACCACGGAGCAGGGCAAACCCTTAGCTGAAGCTAAGGG
TGAGGTCGCCTATGCGGCGTCGTTTATCGAATGGTTCGCCGAGGAAGCTAAGCGCGTTTATGGCGATACTATACCGGGCC
ATCAAGGGGATAAGCGTTTGATGGTAATTAAGCAAAGCGTGGGCGTTACTGCGGCAATTACGCCTTGGAATTTTCCGGCG
GCGATGATCACCCGTAAAGCCGCCCCAGCACTGGCGGCAGGCTGTACCATGGTGGTTAAGCCTGCACCACAAACCCCATT
TACCGCACTGGCGTTAGCAGAACTTGCCGAGCGTGCGGGCATTCCTGCAGGTGTATTTAGTGTCGTCACCGGCGATGCTA
TTGCCATCGGTAACGAGCTTTGTAGTAATCCTGTGGTTCGCAAGCTCTCCTTCACTGGCTCCACCCCCGTGGGCATTAAG
CTGATGCAGCAGTGCGCGCCGACACTCAAGAAGATGTCACTGGAGCTTGGCGGTAATGCGCCCTTTATCGTATTTAACGA
TGCCGATATCGATGCAGCGGTTGAGGGGGCGATGATTGCCAAATATCGCAATGCTGGCCAGACCTGCGTCTGTGCCAACC
GCATTTATGTTCAAGACCGTGTATACGATGAGTTTGCCGAGAAGCTGGCCGCTGCCGTTGCCAAGTTAAAGGTGGGCGTA
GGCACTGAGGCAGGTGTTACCACTGGGCCACTGATTAACAGTGACGCAGTCGCTAAAGTTCAAAGACATCTGGATGATGC
CTTGTCAAAAGGTGCAACTTTGTTTGCTGGTGGCAAGCTAGCGAGTTTAGGCGGTAACTTCTTTGAGCCAACGATTCTTA
CAAATGTTGATAAAAGCATGTTAGTCGCTAAAGAGGAAACCTTTGGGCCGCTAGCGCCGCTATTTAAGTTCTCCGATGTC
GATGATGTGATTGAGCAGGCCAACGATACCGAGTTTGGTCTAGCAGCCTATTTCTATGGTCGTGACATCTCACTGGTGTG
GAAAGTCTCTGAAGCACTGGAGTATGGCATGGTAGGGGTTAACACTGGGCTTATTTCCACCGAAGTGGCGCCGTTTGGCG
GCATAAAATCATCGGGATTGGGCCGCGAAGGCTCTAAGTTTGGTATCGAAGAGTACTTGGAGATGAAATACATCTGCATG
TCTGTTTAA

Upstream 100 bases:

>100_bases
CTCGGCTTTAGGGGGTCGAAGACTATACCAATCAGATATTTAATATGATTGATATTAGTCTGTCGCCTGAACAGCGTTAA
AGCAATTTAAGGAGTTACCC

Downstream 100 bases:

>100_bases
TACTTGAAGATTAAGTTCATCAGTATGTCAGTTAAAAGGAAATCGTTATGACAACTAATGAGTCACTTATGGTGCGCCGC
CAAGCGGCGGTCGCTAATGG

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MQLNDMSLLRQQCYIDGQWLEAINGEKVEIADPATHKVIGSVPVMGTTETKAAITAAEKALPAWRALTAKERGAKLHRWF
ELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFAEEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAPQTPFTALALAELAERAGIPAGVFSVVTGDAIAIGNELCSNPVVRKLSFTGSTPVGIK
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDRVYDEFAEKLAAAVAKLKVGV
GTEAGVTTGPLINSDAVAKVQRHLDDALSKGATLFAGGKLASLGGNFFEPTILTNVDKSMLVAKEETFGPLAPLFKFSDV
DDVIEQANDTEFGLAAYFYGRDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKSSGLGREGSKFGIEEYLEMKYICM
SV

Sequences:

>Translated_482_residues
MQLNDMSLLRQQCYIDGQWLEAINGEKVEIADPATHKVIGSVPVMGTTETKAAITAAEKALPAWRALTAKERGAKLHRWF
ELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFAEEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAPQTPFTALALAELAERAGIPAGVFSVVTGDAIAIGNELCSNPVVRKLSFTGSTPVGIK
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDRVYDEFAEKLAAAVAKLKVGV
GTEAGVTTGPLINSDAVAKVQRHLDDALSKGATLFAGGKLASLGGNFFEPTILTNVDKSMLVAKEETFGPLAPLFKFSDV
DDVIEQANDTEFGLAAYFYGRDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKSSGLGREGSKFGIEEYLEMKYICM
SV
>Mature_482_residues
MQLNDMSLLRQQCYIDGQWLEAINGEKVEIADPATHKVIGSVPVMGTTETKAAITAAEKALPAWRALTAKERGAKLHRWF
ELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFAEEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAPQTPFTALALAELAERAGIPAGVFSVVTGDAIAIGNELCSNPVVRKLSFTGSTPVGIK
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDRVYDEFAEKLAAAVAKLKVGV
GTEAGVTTGPLINSDAVAKVQRHLDDALSKGATLFAGGKLASLGGNFFEPTILTNVDKSMLVAKEETFGPLAPLFKFSDV
DDVIEQANDTEFGLAAYFYGRDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKSSGLGREGSKFGIEEYLEMKYICM
SV

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=477, Percent_Identity=53.8784067085954, Blast_Score=509, Evalue=1e-144,
Organism=Homo sapiens, GI25777721, Length=490, Percent_Identity=52.2448979591837, Blast_Score=499, Evalue=1e-141,
Organism=Homo sapiens, GI238814322, Length=484, Percent_Identity=37.396694214876, Blast_Score=324, Evalue=1e-88,
Organism=Homo sapiens, GI21614513, Length=477, Percent_Identity=37.9454926624738, Blast_Score=315, Evalue=4e-86,
Organism=Homo sapiens, GI21361176, Length=486, Percent_Identity=36.4197530864198, Blast_Score=303, Evalue=2e-82,
Organism=Homo sapiens, GI25777730, Length=478, Percent_Identity=37.4476987447699, Blast_Score=302, Evalue=4e-82,
Organism=Homo sapiens, GI12007648, Length=480, Percent_Identity=34.5833333333333, Blast_Score=301, Evalue=1e-81,
Organism=Homo sapiens, GI153266822, Length=486, Percent_Identity=36.0082304526749, Blast_Score=300, Evalue=2e-81,
Organism=Homo sapiens, GI115387104, Length=487, Percent_Identity=35.523613963039, Blast_Score=298, Evalue=1e-80,
Organism=Homo sapiens, GI25777724, Length=484, Percent_Identity=35.1239669421488, Blast_Score=293, Evalue=2e-79,
Organism=Homo sapiens, GI25777732, Length=483, Percent_Identity=34.9896480331263, Blast_Score=285, Evalue=7e-77,
Organism=Homo sapiens, GI25777728, Length=419, Percent_Identity=37.4701670644391, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI25777726, Length=484, Percent_Identity=32.0247933884297, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI25952152, Length=480, Percent_Identity=31.25, Blast_Score=232, Evalue=5e-61,
Organism=Homo sapiens, GI11095441, Length=474, Percent_Identity=28.4810126582279, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI188035924, Length=466, Percent_Identity=29.1845493562232, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI310128103, Length=466, Percent_Identity=29.1845493562232, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI310128093, Length=464, Percent_Identity=29.5258620689655, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI301500698, Length=279, Percent_Identity=36.5591397849462, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI310128091, Length=386, Percent_Identity=30.8290155440415, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI310128089, Length=330, Percent_Identity=30.9090909090909, Blast_Score=159, Evalue=8e-39,
Organism=Homo sapiens, GI223972651, Length=462, Percent_Identity=27.4891774891775, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=32.8125, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI310128095, Length=309, Percent_Identity=30.0970873786408, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI206597441, Length=427, Percent_Identity=26.6978922716628, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI206597439, Length=427, Percent_Identity=26.6978922716628, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI22907049, Length=427, Percent_Identity=26.6978922716628, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI25777736, Length=383, Percent_Identity=27.9373368146214, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI25777734, Length=383, Percent_Identity=27.9373368146214, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI73466520, Length=336, Percent_Identity=28.5714285714286, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI238859541, Length=383, Percent_Identity=27.9373368146214, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI4557303, Length=336, Percent_Identity=28.5714285714286, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI73695881, Length=335, Percent_Identity=28.3582089552239, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI73695879, Length=335, Percent_Identity=28.3582089552239, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI4502043, Length=426, Percent_Identity=26.9953051643192, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI238814371, Length=426, Percent_Identity=26.9953051643192, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI71773324, Length=360, Percent_Identity=27.2222222222222, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI310128087, Length=289, Percent_Identity=29.4117647058824, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI223972653, Length=462, Percent_Identity=24.2424242424242, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI310128099, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI310128101, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1789015, Length=482, Percent_Identity=71.7842323651452, Blast_Score=732, Evalue=0.0,
Organism=Escherichia coli, GI1787684, Length=474, Percent_Identity=35.6540084388186, Blast_Score=323, Evalue=1e-89,
Organism=Escherichia coli, GI87081896, Length=482, Percent_Identity=36.5145228215768, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1786504, Length=479, Percent_Identity=34.0292275574113, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1787715, Length=476, Percent_Identity=34.6638655462185, Blast_Score=266, Evalue=3e-72,
Organism=Escherichia coli, GI1787558, Length=484, Percent_Identity=32.0247933884297, Blast_Score=255, Evalue=6e-69,
Organism=Escherichia coli, GI87081926, Length=447, Percent_Identity=32.662192393736, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI87082295, Length=491, Percent_Identity=31.1608961303462, Blast_Score=233, Evalue=3e-62,
Organism=Escherichia coli, GI1787250, Length=466, Percent_Identity=28.9699570815451, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1788042, Length=460, Percent_Identity=30, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1787653, Length=405, Percent_Identity=25.9259259259259, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17534119, Length=473, Percent_Identity=48.2029598308668, Blast_Score=431, Evalue=1e-121,
Organism=Caenorhabditis elegans, GI133930964, Length=490, Percent_Identity=38.1632653061225, Blast_Score=334, Evalue=5e-92,
Organism=Caenorhabditis elegans, GI17562198, Length=476, Percent_Identity=35.5042016806723, Blast_Score=288, Evalue=3e-78,
Organism=Caenorhabditis elegans, GI25144435, Length=485, Percent_Identity=34.4329896907216, Blast_Score=285, Evalue=5e-77,
Organism=Caenorhabditis elegans, GI25143876, Length=470, Percent_Identity=35.3191489361702, Blast_Score=281, Evalue=4e-76,
Organism=Caenorhabditis elegans, GI25143874, Length=470, Percent_Identity=35.3191489361702, Blast_Score=281, Evalue=6e-76,
Organism=Caenorhabditis elegans, GI32564736, Length=418, Percent_Identity=35.6459330143541, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI71995606, Length=479, Percent_Identity=32.776617954071, Blast_Score=244, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI17551164, Length=461, Percent_Identity=31.6702819956616, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71995613, Length=412, Percent_Identity=32.7669902912621, Blast_Score=218, Evalue=6e-57,
Organism=Caenorhabditis elegans, GI115534176, Length=467, Percent_Identity=31.0492505353319, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71986308, Length=474, Percent_Identity=28.9029535864979, Blast_Score=201, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI17564084, Length=343, Percent_Identity=29.7376093294461, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI25146391, Length=340, Percent_Identity=31.4705882352941, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI32566756, Length=340, Percent_Identity=31.4705882352941, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI25146394, Length=340, Percent_Identity=31.4705882352941, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17534447, Length=463, Percent_Identity=27.4298056155508, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI32564151, Length=416, Percent_Identity=27.1634615384615, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI115532534, Length=396, Percent_Identity=27.5252525252525, Blast_Score=131, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI71990744, Length=300, Percent_Identity=27, Blast_Score=87, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6319478, Length=481, Percent_Identity=51.1434511434511, Blast_Score=497, Evalue=1e-141,
Organism=Saccharomyces cerevisiae, GI6320917, Length=470, Percent_Identity=35.7446808510638, Blast_Score=301, Evalue=1e-82,
Organism=Saccharomyces cerevisiae, GI6324950, Length=468, Percent_Identity=33.974358974359, Blast_Score=291, Evalue=2e-79,
Organism=Saccharomyces cerevisiae, GI6325196, Length=469, Percent_Identity=33.9019189765458, Blast_Score=268, Evalue=2e-72,
Organism=Saccharomyces cerevisiae, GI6323822, Length=485, Percent_Identity=32.5773195876289, Blast_Score=257, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6323821, Length=481, Percent_Identity=32.4324324324324, Blast_Score=257, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6321828, Length=478, Percent_Identity=25.5230125523013, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321826, Length=504, Percent_Identity=23.4126984126984, Blast_Score=97, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6323757, Length=348, Percent_Identity=26.7241379310345, Blast_Score=93, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281362580, Length=479, Percent_Identity=50.7306889352818, Blast_Score=490, Evalue=1e-139,
Organism=Drosophila melanogaster, GI62472918, Length=479, Percent_Identity=50.7306889352818, Blast_Score=490, Evalue=1e-139,
Organism=Drosophila melanogaster, GI62472926, Length=479, Percent_Identity=50.7306889352818, Blast_Score=490, Evalue=1e-139,
Organism=Drosophila melanogaster, GI62472936, Length=479, Percent_Identity=50.7306889352818, Blast_Score=490, Evalue=1e-139,
Organism=Drosophila melanogaster, GI21356737, Length=479, Percent_Identity=50.7306889352818, Blast_Score=490, Evalue=1e-139,
Organism=Drosophila melanogaster, GI24650465, Length=475, Percent_Identity=39.3684210526316, Blast_Score=330, Evalue=1e-90,
Organism=Drosophila melanogaster, GI24585660, Length=480, Percent_Identity=35.2083333333333, Blast_Score=303, Evalue=1e-82,
Organism=Drosophila melanogaster, GI20129399, Length=482, Percent_Identity=37.344398340249, Blast_Score=303, Evalue=1e-82,
Organism=Drosophila melanogaster, GI24666674, Length=475, Percent_Identity=28.8421052631579, Blast_Score=189, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24638878, Length=475, Percent_Identity=28, Blast_Score=183, Evalue=3e-46,
Organism=Drosophila melanogaster, GI24638876, Length=475, Percent_Identity=28, Blast_Score=182, Evalue=3e-46,
Organism=Drosophila melanogaster, GI45552499, Length=339, Percent_Identity=28.3185840707965, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI281360303, Length=436, Percent_Identity=25, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24668425, Length=430, Percent_Identity=24.4186046511628, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24668417, Length=430, Percent_Identity=24.4186046511628, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24668413, Length=430, Percent_Identity=24.4186046511628, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281360299, Length=339, Percent_Identity=28.023598820059, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281360297, Length=339, Percent_Identity=28.023598820059, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281360295, Length=339, Percent_Identity=28.023598820059, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24586250, Length=339, Percent_Identity=28.023598820059, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281360301, Length=435, Percent_Identity=24.8275862068966, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571802, Length=384, Percent_Identity=23.4375, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI28571800, Length=384, Percent_Identity=23.4375, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI28571798, Length=384, Percent_Identity=23.4375, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28571796, Length=384, Percent_Identity=23.4375, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28571794, Length=384, Percent_Identity=23.4375, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28571806, Length=384, Percent_Identity=23.4375, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI28574525, Length=451, Percent_Identity=20.8425720620843, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51515; Mature: 51515

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNDMSLLRQQCYIDGQWLEAINGEKVEIADPATHKVIGSVPVMGTTETKAAITAAEKA
CCCCHHHHHHHHHCCCCHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHH
LPAWRALTAKERGAKLHRWFELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFA
CHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHH
EEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
HHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHCCCHHHHCCEEEEE
PAPQTPFTALALAELAERAGIPAGVFSVVTGDAIAIGNELCSNPVVRKLSFTGSTPVGIK
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHEECHHHHCCCHHEEEECCCCCCHHHH
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDR
HHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEEEEHHH
VYDEFAEKLAAAVAKLKVGVGTEAGVTTGPLINSDAVAKVQRHLDDALSKGATLFAGGKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCEE
ASLGGNFFEPTILTNVDKSMLVAKEETFGPLAPLFKFSDVDDVIEQANDTEFGLAAYFYG
HHCCCCCCCCHHCCCCCHHHEEECCCCCCCHHHHHHCCCHHHHHHHCCCCCCCEEEEEEC
RDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKSSGLGREGSKFGIEEYLEMKYICM
CCEEEEEEEHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SV
CC
>Mature Secondary Structure
MQLNDMSLLRQQCYIDGQWLEAINGEKVEIADPATHKVIGSVPVMGTTETKAAITAAEKA
CCCCHHHHHHHHHCCCCHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHHH
LPAWRALTAKERGAKLHRWFELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFA
CHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHH
EEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
HHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHCCCHHHHCCEEEEE
PAPQTPFTALALAELAERAGIPAGVFSVVTGDAIAIGNELCSNPVVRKLSFTGSTPVGIK
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHEECHHHHCCCHHEEEECCCCCCHHHH
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDR
HHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEEEEHHH
VYDEFAEKLAAAVAKLKVGVGTEAGVTTGPLINSDAVAKVQRHLDDALSKGATLFAGGKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCEE
ASLGGNFFEPTILTNVDKSMLVAKEETFGPLAPLFKFSDVDDVIEQANDTEFGLAAYFYG
HHCCCCCCCCHHCCCCCHHHEEECCCCCCCHHHHHHCCCHHHHHHHCCCCCCCEEEEEEC
RDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKSSGLGREGSKFGIEEYLEMKYICM
CCEEEEEEEHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]