| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yjgM [H]
Identifier: 167622761
GI number: 167622761
Start: 1024177
End: 1025118
Strand: Reverse
Name: yjgM [H]
Synonym: Shal_0821
Alternate gene names: 167622761
Gene position: 1025118-1024177 (Counterclockwise)
Preceding gene: 167622762
Following gene: 167622760
Centisome position: 19.61
GC content: 47.35
Gene sequence:
>942_bases ATGAATCAAGCTCAAGCTAATAACCCTTTTGCTGCTTCTCTGCTACGTCGCCTCTCTAGGCAACTTATCCGTCAACTCGG TTTGTTAGGTGCTGCCTGCGGTAACCAGCCTCTCTCCCCAGTTCAAGCCCATACCCTAATTGAGTTAGGCGAAAACAGTT ACTCAATTAAGCAACTCGCTGAAATCATCAATATAGACAAATCTAACGCAAGCCGAGCCGTAAGCCAGCTTGTAGAAAAA GGGTTTGCTAAGTCGCAATCGAACCCGAAAGATAATCGTAGTTTAGTGGTACAAATTACCCCGAAAGGAAAGAAGCAGCT GCTTCAGTTAAATAAGCAACAAAACCAGCAGTTCAGCGACATTATGGCCCAGCTCCCCGCAGAACATATTGCAGAGCTGG AGCTCTCACTAAGGCGTTACAACAAAGCCGTGCTGCAGTCTAAGTCCCAGCAAGGCTATAGCATCAGAAGTATTACAAGC GATGACAATGCACAGATGGCCCAAGTGATCCGTCAAGTGTCAGCCGAATATGGCCTAACAGCAGACAAAGGCTATGGCGT AGCCGATAAAACTCTGGATAACCTGAGTGAGGTTTATCAAGCCCAGAATGCCCATTACTGGGTTATAGAGCTCGAGGGTA AGATTTTAGGCGGCGCTGGCATCGCGCCATTGGTTGGACACCCTGACACCTGTGAATTACAGAAGATGTACTTCCTACCC GAAGTACGCGGCAAAGGCTTTGCCAAGCGTCTAGCGCTGCAAGCTATTCGCTATGCTAATGTTCAAGGCTATACATCATG TTATTTAGAAACCACCGCTAACCTTATTGAAGCTATAAAGCTCTATGAATCGCTAGGCTTTAAGCATCTCGACGGGCCAA TAGGCAATACTGGCCATGATGCCTGTGAGATCACCATGTTACGTCCGCTGAGCGCTGGTTAA
Upstream 100 bases:
>100_bases TTAATTAGTCTTTACTTTATTATTTTCATCTTAATACGCTTGATTTTGAAAAAGAGTCCTCGTAAGTTAGATGCTAATCG CAACTAAATAAGAACTGTCG
Downstream 100 bases:
>100_bases ACTATTTATCTGCTGAGGTATTCAAACTGCAGCTAAGTTAATGGTTTTTATTGGTAAAGCTTGCTAGCCTCAAAGTAAGT GGTCTTCGCATATAAGTGAG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLAEIINIDKSNASRAVSQLVEK GFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSDIMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITS DDNAQMAQVIRQVSAEYGLTADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHDACEITMLRPLSAG
Sequences:
>Translated_313_residues MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLAEIINIDKSNASRAVSQLVEK GFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSDIMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITS DDNAQMAQVIRQVSAEYGLTADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHDACEITMLRPLSAG >Mature_313_residues MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLAEIINIDKSNASRAVSQLVEK GFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSDIMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITS DDNAQMAQVIRQVSAEYGLTADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHDACEITMLRPLSAG
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI48995002, Length=157, Percent_Identity=61.1464968152866, Blast_Score=174, Evalue=8e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 34383; Mature: 34383
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH EIINIDKSNASRAVSQLVEKGFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSD HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH IMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITSDDNAQMAQVIRQVSAEYGLT HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC ADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHCC EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHD CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ACEITMLRPLSAG CEEEEEECCCCCC >Mature Secondary Structure MNQAQANNPFAASLLRRLSRQLIRQLGLLGAACGNQPLSPVQAHTLIELGENSYSIKQLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH EIINIDKSNASRAVSQLVEKGFAKSQSNPKDNRSLVVQITPKGKKQLLQLNKQQNQQFSD HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH IMAQLPAEHIAELELSLRRYNKAVLQSKSQQGYSIRSITSDDNAQMAQVIRQVSAEYGLT HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC ADKGYGVADKTLDNLSEVYQAQNAHYWVIELEGKILGGAGIAPLVGHPDTCELQKMYFLP CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHCC EVRGKGFAKRLALQAIRYANVQGYTSCYLETTANLIEAIKLYESLGFKHLDGPIGNTGHD CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ACEITMLRPLSAG CEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8253666; 11677609 [H]