| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is bluB [H]
Identifier: 167622681
GI number: 167622681
Start: 921968
End: 922639
Strand: Reverse
Name: bluB [H]
Synonym: Shal_0741
Alternate gene names: 167622681
Gene position: 922639-921968 (Counterclockwise)
Preceding gene: 167622682
Following gene: 167622680
Centisome position: 17.65
GC content: 46.13
Gene sequence:
>672_bases ATGAGCCGACAATTTACGTTAGATGATAGCCAGTTACTCGCCGACATTATTCAGCTAAGACGCGATGTGAGAGGTAATCG CTTTCTATCAAAGCCCATCGATGATGACACTTTAGATAAACTACTCGATGCCGCACTCAACGCCCCTTCCGTTGGTTACT CTCAACCTTGGCAGTTTGTGGTGATCCGCGAAGATGCCGTTAAACGGCAAGTGCATCACTCTTTTATTGAAGAAAATGCC TCAGGTGCAAAACTGTTTAATGGTGAAAAACAGAGGCAATATCAAAACTTGAAGCTTGAGGGGATCTTGGAAGCCCCGGT CAACCTCGCGATTTTTTATCGACCTAAACCGGGTGCGGTACTGGGACAAACTAGCATGGCTGACATGGGCCGATTTAGCG TGGTATGCGCCATTCAAAATCTGTGGTTGATGGCTCGTTCACTCAATATCGGAGTCGGCTGGGTCAGCATTATCGACCCA GAGTCGGTAAAAAAGATCCTCAACGCACCTCAAGATGCCGAACTTATTGGCTACCTCTGCATAGGTTATGTTGAAGATTT TCTGGCCGAACCTGAGTTAAAAACCCTTGGATGGGAAAAACAAAAAACCAAGAGCCAAGTGATATTTAAAGAGACCTTTA ATTCGTCTTGCACGGAGGGGCAAAGCGCTTGA
Upstream 100 bases:
>100_bases CTACCGCTGATTTAGCTGCATATTACAGCTAATACGGATATGCTTTAGGCGCCCTAATGGGTGCCTTTTTTATGCTTGCC CTTTCACGATAGAGACAAAT
Downstream 100 bases:
>100_bases TGCGGGCAACACCAAAAAAATCATAAAAAAAAACTCTTTTTTTAAAAGGCTCCGTTTGTACTAAACAAGACAAGCAACTA ATACTTATAATCAGTTTTTA
Product: cob(II)yrinic acid a,c-diamide reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFVVIREDAVKRQVHHSFIEENA SGAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAVLGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDP ESVKKILNAPQDAELIGYLCIGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA
Sequences:
>Translated_223_residues MSRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFVVIREDAVKRQVHHSFIEENA SGAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAVLGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDP ESVKKILNAPQDAELIGYLCIGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA >Mature_222_residues SRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFVVIREDAVKRQVHHSFIEENAS GAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAVLGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDPE SVKKILNAPQDAELIGYLCIGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA
Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012825 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.16.8.1 [H]
Molecular weight: Translated: 25036; Mature: 24905
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFV CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE VIREDAVKRQVHHSFIEENASGAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAV EECHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCEEEECCCCEEEEEEECCCCCE LGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDPESVKKILNAPQDAELIGYLC ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHH IGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SRQFTLDDSQLLADIIQLRRDVRGNRFLSKPIDDDTLDKLLDAALNAPSVGYSQPWQFV CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE VIREDAVKRQVHHSFIEENASGAKLFNGEKQRQYQNLKLEGILEAPVNLAIFYRPKPGAV EECHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCEEEECCCCEEEEEEECCCCCE LGQTSMADMGRFSVVCAIQNLWLMARSLNIGVGWVSIIDPESVKKILNAPQDAELIGYLC ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHH IGYVEDFLAEPELKTLGWEKQKTKSQVIFKETFNSSCTEGQSA HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7635831; 9256491 [H]