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The map label for this gene is 167622616

Identifier: 167622616

GI number: 167622616

Start: 833849

End: 834898

Strand: Reverse

Name: 167622616

Synonym: Shal_0676

Alternate gene names: NA

Gene position: 834898-833849 (Counterclockwise)

Preceding gene: 167622617

Following gene: 167622613

Centisome position: 15.97

GC content: 42.76

Gene sequence:

>1050_bases
ATGAAAAAGACACTAATCTCTGCATCAGTGGCATCAGTTTTAACCCTAGCTTCTTTCGGCGCGCTAGCCGATGGTCCTGG
CTTTTACGGCCGTTTAGATCTAGCCGTAACAAACTCTGATACAGGTGCAACAACTCAAAACGGTAAATCAGGTACTGTTT
TCGAAAACAACTTCTCTTTCGTTGGTGTTAAAGGCACTGAAAGCCTAACTAACAACATCGACGTTGTTTACCAGATGGAG
TTCCAAGTTGAGAACACAACTAACTCTGGTGAAACTTTTAAAGCACGTAATACTTACCTAGGTCTTAAGTCTCAAGCAGG
TACCGTACTTGTAGGTCGTAACGATCACGTATTCAAGCAGTCTGAAGGCGGCGTTGATATCTTTGGTAACACAAACGCCG
ATATCGACCGTCTAGTTGCTGGCCAAGACCGTGTTGCTGATGGTATCTGGTACTACTCACCAAAGATTGCTGGTCTAGTA
ACATTGAACGCGACTTACCTAATGGAAGACAACTACATCGATGCTGATGATAAAGATGCAGTTGCCTCTTATGACGCACA
GTATGCACTAAGTGCAACTATCGGTGACAAGAAACTTAAAGAGCAGAACTACTACGTTGCAGCAGCTTATAACACTATCA
AAGGTATCGATGCATACCGTGGTGTAGCTCAAGTTAAGTTAGGTGACTTCAAAGTAGGTGGTCTATTCCAGAACACTGAA
AGCCAAACAACTGATCAAGAAGGTAACTCTTACTTCGTCAACGTTGCTTACAACCTAAACGGCGTTAACCTAAAAGCTGA
ATACGGCATGGACGAAGGCGGTTTCGGTAAGTACTACCAAAACTCTGTACCAAAAGTTGATGGCAGCAAAGTAATTGGTA
CTGATATCAACGTTCAAGTGATCACTGTCGGTGCTGACTACAAGATCTCTAAGTCAACTATGGTATATGGCCACTATGCT
ATGTACGAAGGCGACCATAAAGTTGCTGGTAACAAATTTGACCTAAAAGATGACAACGTATTCACCGTTGGTCTACGTTA
CAACTTCTAA

Upstream 100 bases:

>100_bases
CCCACAATTGTTGTGAGCTAGGATGCTTGTAGCAAAAACAAAAGTTTATGCAATAAACCATAAGAAACGAATAGGAACTT
AGGTTCTGGGAGCAAATGAT

Downstream 100 bases:

>100_bases
TCGATTGAGTCATCAGACTCTATAACGATTTTAAGCCATAAAAAAGCGACCTTAGGGTCGCTTTTTTGATCTGGTTAGAT
GATGAGAGAAGGTTCGAGGA

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Gram-Negative Porin Superfamily; Outer Membrane Porin Protein; Porin Signal Peptide Protein

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKKTLISASVASVLTLASFGALADGPGFYGRLDLAVTNSDTGATTQNGKSGTVFENNFSFVGVKGTESLTNNIDVVYQME
FQVENTTNSGETFKARNTYLGLKSQAGTVLVGRNDHVFKQSEGGVDIFGNTNADIDRLVAGQDRVADGIWYYSPKIAGLV
TLNATYLMEDNYIDADDKDAVASYDAQYALSATIGDKKLKEQNYYVAAAYNTIKGIDAYRGVAQVKLGDFKVGGLFQNTE
SQTTDQEGNSYFVNVAYNLNGVNLKAEYGMDEGGFGKYYQNSVPKVDGSKVIGTDINVQVITVGADYKISKSTMVYGHYA
MYEGDHKVAGNKFDLKDDNVFTVGLRYNF

Sequences:

>Translated_349_residues
MKKTLISASVASVLTLASFGALADGPGFYGRLDLAVTNSDTGATTQNGKSGTVFENNFSFVGVKGTESLTNNIDVVYQME
FQVENTTNSGETFKARNTYLGLKSQAGTVLVGRNDHVFKQSEGGVDIFGNTNADIDRLVAGQDRVADGIWYYSPKIAGLV
TLNATYLMEDNYIDADDKDAVASYDAQYALSATIGDKKLKEQNYYVAAAYNTIKGIDAYRGVAQVKLGDFKVGGLFQNTE
SQTTDQEGNSYFVNVAYNLNGVNLKAEYGMDEGGFGKYYQNSVPKVDGSKVIGTDINVQVITVGADYKISKSTMVYGHYA
MYEGDHKVAGNKFDLKDDNVFTVGLRYNF
>Mature_349_residues
MKKTLISASVASVLTLASFGALADGPGFYGRLDLAVTNSDTGATTQNGKSGTVFENNFSFVGVKGTESLTNNIDVVYQME
FQVENTTNSGETFKARNTYLGLKSQAGTVLVGRNDHVFKQSEGGVDIFGNTNADIDRLVAGQDRVADGIWYYSPKIAGLV
TLNATYLMEDNYIDADDKDAVASYDAQYALSATIGDKKLKEQNYYVAAAYNTIKGIDAYRGVAQVKLGDFKVGGLFQNTE
SQTTDQEGNSYFVNVAYNLNGVNLKAEYGMDEGGFGKYYQNSVPKVDGSKVIGTDINVQVITVGADYKISKSTMVYGHYA
MYEGDHKVAGNKFDLKDDNVFTVGLRYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37862; Mature: 37862

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLISASVASVLTLASFGALADGPGFYGRLDLAVTNSDTGATTQNGKSGTVFENNFSF
CCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCEE
VGVKGTESLTNNIDVVYQMEFQVENTTNSGETFKARNTYLGLKSQAGTVLVGRNDHVFKQ
EEECCCCHHCCCEEEEEEEEEEEECCCCCCCEEEECCEEEEEECCCCEEEECCCCCEEEE
SEGGVDIFGNTNADIDRLVAGQDRVADGIWYYSPKIAGLVTLNATYLMEDNYIDADDKDA
CCCCEEEECCCCCCHHHHCCCCCHHCCCEEEECCCEEEEEEEEEEEEEECCCCCCCCCCH
VASYDAQYALSATIGDKKLKEQNYYVAAAYNTIKGIDAYRGVAQVKLGDFKVGGLFQNTE
HHCCCCEEEEEEECCCHHHHCCCEEEEEEECCCCCCHHHCCEEEEEECCEEECCEEECCC
SQTTDQEGNSYFVNVAYNLNGVNLKAEYGMDEGGFGKYYQNSVPKVDGSKVIGTDINVQV
CCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCHHHCCCCCCCCCEEEECCCEEEE
ITVGADYKISKSTMVYGHYAMYEGDHKVAGNKFDLKDDNVFTVGLRYNF
EEECCCCEECCCEEEEEEEEEEECCCEECCCEECCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKTLISASVASVLTLASFGALADGPGFYGRLDLAVTNSDTGATTQNGKSGTVFENNFSF
CCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCEE
VGVKGTESLTNNIDVVYQMEFQVENTTNSGETFKARNTYLGLKSQAGTVLVGRNDHVFKQ
EEECCCCHHCCCEEEEEEEEEEEECCCCCCCEEEECCEEEEEECCCCEEEECCCCCEEEE
SEGGVDIFGNTNADIDRLVAGQDRVADGIWYYSPKIAGLVTLNATYLMEDNYIDADDKDA
CCCCEEEECCCCCCHHHHCCCCCHHCCCEEEECCCEEEEEEEEEEEEEECCCCCCCCCCH
VASYDAQYALSATIGDKKLKEQNYYVAAAYNTIKGIDAYRGVAQVKLGDFKVGGLFQNTE
HHCCCCEEEEEEECCCHHHHCCCEEEEEEECCCCCCHHHCCEEEEEECCEEECCEEECCC
SQTTDQEGNSYFVNVAYNLNGVNLKAEYGMDEGGFGKYYQNSVPKVDGSKVIGTDINVQV
CCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCHHHCCCCCCCCCEEEECCCEEEE
ITVGADYKISKSTMVYGHYAMYEGDHKVAGNKFDLKDDNVFTVGLRYNF
EEECCCCEECCCEEEEEEEEEEECCCEECCCEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA